EMLSAT00000003249, EMLSAT00000003249-699096 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003249
Unique NameEMLSAT00000003249-699096
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s178supercontigLSalAtl2s178:388656..391435 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003249 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003249EMLSAG00000003249-686015Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014218EMLSAE00000014218-723146Lepeophtheirus salmonisexon
EMLSAE00000014219EMLSAE00000014219-723147Lepeophtheirus salmonisexon
EMLSAE00000014220EMLSAE00000014220-723148Lepeophtheirus salmonisexon
EMLSAE00000014221EMLSAE00000014221-723149Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777165auto777165Lepeophtheirus salmonispolypeptide
EMLSAP00000003249EMLSAP00000003249Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003249

>EMLSAP00000003249 ID=EMLSAP00000003249|Name=EMLSAP00000003249|organism=Lepeophtheirus salmonis|type=polypeptide|length=70bp
MPNLEVLIGAQQVYMIAKRLRILDFVKKIVLEHQMCLLTFARQRMVKDVY
FHLNTMAKPTTIVQLQATTT
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mRNA from alignment at LSalAtl2s178:388656..391435-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003249-699096 ID=EMLSAT00000003249-699096|Name=EMLSAT00000003249|organism=Lepeophtheirus salmonis|type=mRNA|length=2780bp|location=Sequence derived from alignment at LSalAtl2s178:388656..391435- (Lepeophtheirus salmonis)
AGCATGGATTCTCCAGCAGGTGGGGGCTGGAAATGTGATATATTGTACAT
TACGCATAACGTTTTCTACTTTTTTTCTTACAGACTGCATGACAACCGAA
GAAAAGAAGTGTATTTTTCCATTTCTTTATAAAGGAGAAAGCTATAATCA
ATGTACAAATGCCGAATTTGGAAGTGCTTATTGGTGCGCAACAAGTTTAT
ATGATAGCAAAGAGGTTAAGGATTTTGGACTTTGTCAAAAAAATTGTTCT
TGTGAGTAAGGGGGATAAATAAAATCTGGGTCAATTGGGGGTTCATTTAT
AAAAAATCAAAATCCTGTGAAAAGTGCATTTATATAAATTAATCAACATT
CTTTTCTTTTAATGGTCAGAAAAACCTAAATAGATTATTATTATTTTTTT
TTAACAAAAACCAAGATTTGAAAAAATTTCTTAGAACAATCGAAATTTAT
TTGGTACAAAACTCGCCCATTAAATTAGAAAAGAAAAGGGTCCTTGTTTA
TCTTTACCCTAGGCCCTGTTCAGAATAAAATTAGCCCTGATTGACATGAT
GAGTTGTATATTTTATATGTAATAAATTTCATTTTAATTTAGGGACTGTG
AATCCAAGTAGCAAAGGTAAGAAATGATTTTAAAGGGGAGTACCTTGTAA
AATAATACAAAAATAATTATAGCTTGTCAAACATCTACAGCAAAAATATG
CGTTTTTCCATTCAAATATAATAATAAAGAGTACCGACAATGTACATCTG
TGGATAACAATGGTGTTAAATGGTGTGCCACAAGTGTGCATGATAGCTTA
GATGCAAAAGGCTATGGAAATTGCTTGGATTGTACATGTAGTAGTGAGTT
TTCTCCTTCCTCGTCTCTGCATTGCTTGATCCAATAGTTATTCGCTTTTT
ACCATTTAGATTGTACTGTCTCAACAGGGAATGAAGAATGTCTCTTTCCC
TTTATCTATAAAGGCTACACTTATTACAGATGTACAGATGCCGACTTTGA
TGGCAAATACTGGTGTGCAACATCTCGCTACAATACAGGAGAGGTTAATA
ATTACGGCCTCTGTCAAAGTGATTGCGTTCGTAAGTTTTACCACCAAATT
TAAGGATACCTATGCATGTCTCTGCAAACATTAGGTGCAAAATCCAGAGA
GAGGGTACTATTAGCGTACATCCAGGCTATGTGTTTAGTTAGTAGCATCT
CTTGGAAGAACACACACCAACTTACAGGCAGATCTGTCTACTTTTTATTT
ATTTATTTTTTGCTTGGTATTCGTTTGAATCAAATAATCAGCTGAAAAAA
TTATGGTGACTGTCTTTTTTGGATTTATAAGGACTAATCCTCATTGACTA
TTTGGAAAAGGATAAAAAACTATTACAGAAGCAAAGAGTCCTTTTCTACC
ACGACAATTCACCAACTCAGCAGTTGTGGTCACGAAATTAATGGAAATAG
GGTTCCAACACGAGCACACACTCTCACTCTTCTGTCAGTCATCACCATAT
CATAGATTTTATCAATGATTTCTGGAGTAGTAATTTCAACAGGGGGTTAT
GCCAAATGGGCATTCCAAAAATATTGAAACCACTTATAAACTGTTTTAAT
CGAAGGTACTCAATATGTTTATCAAGCTTCTTTGTAGTCTCCTGAGGCGT
TTTGCCTTTCATAAAGTAATTTTTAATCAATCCACGAAATTCCTTTTCGT
TCATTTTTTGAAAATCCCTCCACTTCCTAGATTCAAACGAATACCAAAAA
GAAAGAATTGACCGGTCTGGCTGAAGGTGGGTGTGTGTTCTTCCAAGAGA
CGCTACTAACTAAGCTTAACGATGCGCGCCAGTAGTATCATCTCGTCCAT
ACTTTGCATGGACTTTCATTGCGACTCTCGTATATACTAACTTTAAGCAT
TGAAATATTTGTTGGAATATTTATAGATTTGAAAATTCTAAGCATTTACT
CGCGTATGAACTGTTTTGTTGTTGTTGGTTTTTTTTAAATTTTCAAAGCT
GATTTCATTATTATTTTATTCTTGAGGAGAGGGGATCTAAATATAAAGTG
ATCACTATTGCGGGAAAGATGAAGAGTAATTCTGAGGATTTGTTGCGGAG
TTATGAAAGGTAAGTCTTGTTTGATTCTGAATAAAATTAAGAATCGGCAT
CAGACTAACTCCTGCTATGGGGTGGGATTTGTGTTTATTTCCTACCTTAA
ATAGCTGCTTATGACTAATCTAATATAACGTCATGACAGGTTAGCTGCTC
TTGTCCCAAAACATTGTTCACACTTTAAGGATATAATTTTTTATAAAACG
ATTTGTACCGATTTTTTTTGGGAAGAAACTAGACCGAATTTTTCCTTTGA
ACCAATCTAGACAGCAATTTTCCGTTTATCTGATATAGACCAAATTTTGT
TAGCATGGCAATATTCTACTTATTTTTATACATACTGTTAGTGCAGAGAA
TTTTCAACTCCAAATATTCCTCTAGATAATATATAACATATATCTTTTTT
CTCTCTCAATATGTTATGGTATGTTTAGGAACACCAGATGTGTCTTCTGA
CGGTAAGAAAGCCTTGTAACAATATTTTAAAGTACTATAATTTTGACATT
TTTGCAGTTTGCCAGACAAAGAATGGTCAAAGATGTATATTTCCATTTAA
ATACAATGGCCAAACCTACCACAATTGTACAACTACAGGCAACAACAACG
TAAAATGGTGTGCCACTAGTCTTAGAGAGAGTATGGAATACTTAGGCTAT
GGAGATTGTTTGACTGCATCTTGCGGTTGA
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