EMLSAT00000003258, EMLSAT00000003258-699105 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003258
Unique NameEMLSAT00000003258-699105
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1791supercontigLSalAtl2s1791:10266..11252 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003258 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003258EMLSAG00000003258-686024Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014253EMLSAE00000014253-723181Lepeophtheirus salmonisexon
EMLSAE00000014254EMLSAE00000014254-723182Lepeophtheirus salmonisexon
EMLSAE00000014255EMLSAE00000014255-723183Lepeophtheirus salmonisexon
EMLSAE00000014256EMLSAE00000014256-723184Lepeophtheirus salmonisexon
EMLSAE00000014257EMLSAE00000014257-723185Lepeophtheirus salmonisexon
EMLSAE00000014258EMLSAE00000014258-723186Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768904auto768904Lepeophtheirus salmonispolypeptide
EMLSAP00000003258EMLSAP00000003258Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003258

>EMLSAP00000003258 ID=EMLSAP00000003258|Name=EMLSAP00000003258|organism=Lepeophtheirus salmonis|type=polypeptide|length=110bp
LPTPTFPPIKTTVANITVSPLPSTIQNGTITPSNIRTSKPPTDNVTRSLL
LTTIEEETIAPNVTERCLTVDDRECQFPIIIGNTSISMCISIGLGEGLIP
MPIAITGEFY
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mRNA from alignment at LSalAtl2s1791:10266..11252-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003258-699105 ID=EMLSAT00000003258-699105|Name=EMLSAT00000003258|organism=Lepeophtheirus salmonis|type=mRNA|length=987bp|location=Sequence derived from alignment at LSalAtl2s1791:10266..11252- (Lepeophtheirus salmonis)
CTACCAACACCAACTTTTCCACCAATTAAAACAACTGTAGCTAATAGTAA
GTTAATTAAAGTTAAAATTGATTCATGTAACTAAGAATATCTATAAAAKA
TGTTACAATCACTTTGTTTACACCATTGAATTGTAAGTTCATTCTTATAT
CCATTTGTGTAATTAATATAAATTTATAGCAAGAACGAGACGCTTCAACC
CTCCATCTATATTCAATTTGTACTAAATTCTTTTTAATGGAAGAACATTA
ATTATCCCTTTACACTTTTACAGTTACTGTCTCACCACTTCCATCAACAA
TTCAGAATGGAACAATTACACCATCAAGTAAAATATAATTTTCAGTTTTT
ATAGAATGATACATTCAGGAAAATATTTCTTTTATTTCTCCAATATAGAC
ATAAGAACTTCGAAACCTCCGACTGATAATGGTAAATGCTATTTCTAATA
ACTTTACATTTTAATGTAGTGAAGATTCAATGTCTTCTCAATTAAAGAAT
ATAAATGATACTTTTATGATTTTACAGTTACTCGTTCCCTACTTCTAACA
ACAATTGAGGAAGAAACAATTGCACCAAATGGTAAAATCTAATTATCTTA
TCTCATCATCTTTAATTAATCAACAATACAATTTATCACTTGAAATTATT
AACTATTTTATTCACTTATAGTCACTGAACGTTGTTTGACGGTTGACGAT
AGGGAATGTCAATTCCCGATTATTATTGGGAATACGTCCATTAGTATGTG
TATTAGCATAGGCTTAGGAGAGGGTGTATATTTCTGCCCCGTTCATACAC
TACCTGATGAAATGGCTAMTCCMGATAGTTTATYAGTTTTAGGGATTTGC
AAACCAGATTGTCCAAGTATATAATCACATAAATTAAACTTACTAAATAA
AAAACGATATTTGCGTTCTGTTTATACTTTCATTTTGTTTTGTCAGGACT
AATTCCTATGCCCATAGCAATAACGGGTGAGTTTTAT
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