EMLSAT00000003328, EMLSAT00000003328-699175 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003328
Unique NameEMLSAT00000003328-699175
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s182supercontigLSalAtl2s182:497236..498488 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003328 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003328EMLSAG00000003328-686094Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014546EMLSAE00000014546-723474Lepeophtheirus salmonisexon
EMLSAE00000014547EMLSAE00000014547-723475Lepeophtheirus salmonisexon
EMLSAE00000014548EMLSAE00000014548-723476Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778191auto778191Lepeophtheirus salmonispolypeptide
EMLSAP00000003328EMLSAP00000003328Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003328

>EMLSAP00000003328 ID=EMLSAP00000003328|Name=EMLSAP00000003328|organism=Lepeophtheirus salmonis|type=polypeptide|length=123bp
MAYSWDNRVKFVVRYMYDIDNNGFLDKNDFECLAVRNTVMETKGKWCADK
FKKNQEIMYNLWNEISELADFNKDGEXTTEEFKNAIKKVYMGKSFDELPL
GVRSFVSAKFRNLDINGKISDHW
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mRNA from alignment at LSalAtl2s182:497236..498488+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003328-699175 ID=EMLSAT00000003328-699175|Name=EMLSAT00000003328|organism=Lepeophtheirus salmonis|type=mRNA|length=1253bp|location=Sequence derived from alignment at LSalAtl2s182:497236..498488+ (Lepeophtheirus salmonis)
TTTCGAAACACCAATCCCCCCTACTATAAAACCACTATTCAGACTCAACT
TTTTTCTCACTGTATTCAAAAAGTTTGAACCTGTTGGTGATTATTAGTTG
TTTAAAAAAAATTCTTTTTTTTTCTGTTTTGAAAAGAAAATCTTCATAAT
CTCAAAAGGTGAGCTATTTATTTATTTCATATATTCCCTATAAAGCATCA
TCAATCTAAGAGAATAATATGTTTGTAATTTGTTTTTTTCTGCACCCATC
AAAAGCAATGGGGATAGATAATCTTAGTTGAGTGATAGAAGAAGGTTGTT
AATTATACATAAATGTATAAATCCTAAAGTTTATCGAATCTACAGATTAA
ATATTATATATATATACTATATTTGAAATTGGGGCATAGTTTAACCTTTA
AAGTATTATAGGGAGTAACGTGATATGTTTCTAAAGTATCTTGTTAAATT
TTTATTTGATCTTTTCGAAAAAAAAAAATCGTAATTACAGAAAAAAAATA
TTCTTGAGGAACAATTCCCTAAAAAATAATAGATANTTACAAAACATTCT
CCTTATTAATTTCCCGTGTCAAAAAAAAAAAAAATAGTATTGTTCCTCTC
ATTTCTTTGGCCAATTGCCCGGGCTATATTATTAATTCGGATACTAACTA
AGCAGACAATATATGAAGAAAAAAAAATACGTACGCATACTTTTATAATA
ATTTCATTAGTAATCAATATTATTTTATCCATTCTACATAGAACCAAAAT
GGCTTACAGCTGGGATAACCGTGTTAAATTCGTTGTTCGTTACATGTACG
ACATTGACAACAATGGCTTCCTTGATAAAAATGACTTTGAGTGCTTAGCT
GTACGTAACACCGTCATGGAAACTAAGGGCAAGTGGTGTGCCGATAAGTT
CAAGAAGAATCAAGAGATCATGTACAACCTCTGGAATGAAATCTCTGAGT
TAGCTGACTTTAACAAGGTAATTTATTTACATACACTGTGTTGAGAAGGG
AGGTTTTTTAGGAGCAATGAATTGTGCATTAACTAATTAATTATATTTTA
AATAATGCAATTAAATATGCTAAAAGATATCAATTGATATCACCATATAG
GATGGAGAGGMCACAACAGAAGAGTTCAAAAATGCTATTAAAAAAGTTTA
CATGGGAAAGAGTTTTGATGAACTGCCCCTTGGAGTTCGATCCTTTGTTT
CAGCAAAATTCAGAAATTTAGATATAAATGGTAAAATTAGTGATCATTGG
TAG
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