EMLSAT00000003342, EMLSAT00000003342-699189 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003342
Unique NameEMLSAT00000003342-699189
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1831supercontigLSalAtl2s1831:12868..14303 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003342 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003342EMLSAG00000003342-686108Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014595EMLSAE00000014595-723523Lepeophtheirus salmonisexon
EMLSAE00000014596EMLSAE00000014596-723524Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769103auto769103Lepeophtheirus salmonispolypeptide
EMLSAP00000003342EMLSAP00000003342Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003342

>EMLSAP00000003342 ID=EMLSAP00000003342|Name=EMLSAP00000003342|organism=Lepeophtheirus salmonis|type=polypeptide|length=405bp
MDACVGVKKEVDKVISKINEWNKTKNEDLDGHISRVQEIIEKLKQHEDEE
KLNPVEIYVIRIALINIKKFITQIASQHRDLHSSVSKVGKTIDRNFISDF
NSVSQEEFFSEESKTRFLHQVILEHFYRQGRLEISDILSKEAQINEYQAL
KEPFFDLNSILESLRNKDSGPALTWAFTLRSEWNARVKYGPYVKNVQSDG
NIGSPLELRLHRLRFIEMLRSGKRLEAIKYARQHFPQFVDGHEKEIQCLM
GACMYPNIAESPYAHLLSPSLWTDACDHFVREAXALMGXSVESPLSVVIN
AGSQALPALLNIKQVMLHRQVSGTLWNAKDELPIEIDLGNNCRFHSVFAC
PILRQQTSDLNPPLRLTCGHCISRDALTKLSTGQKIKCPLCPIEQNPNDA
RQITF
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mRNA from alignment at LSalAtl2s1831:12868..14303-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003342-699189 ID=EMLSAT00000003342-699189|Name=EMLSAT00000003342|organism=Lepeophtheirus salmonis|type=mRNA|length=1436bp|location=Sequence derived from alignment at LSalAtl2s1831:12868..14303- (Lepeophtheirus salmonis)
ATGGATGCATGTGTAGGAGTAAAGAAAGAAGTGGATAAAGTCATATCCAA
GATTAATGAATGGAATAAAACTAAAAACGAAGACTTGGATGGACACATTT
CTCGAGTCCAAGAAATCATTGAAAAGCTAAAGCAGCACGAAGGTACTTTC
TTCACTTTCTCGCATGGCTATTACTTTTCCTTCTTTCAAACGATGCAATT
TCCCAACATTCATTAAGGTTTTTCTTCTTCTTTCATGTCATTATTATTAT
TATCAAATATGATAATATCTGAGTTGTAAACTCAAACTGTCTACCACTGT
TCTTCCTGGCTTTATGTTTGATCAATTTTCATGCACCAATGTCTGCATTC
TTTCTTTCAGATGAAGAAAAGTTAAATCCAGTGGAAATCTACGTGATTCG
AATTGCCTTGATCAACATTAAAAAGTTCATTACTCAAATAGCTAGTCAGC
ACCGTGATTTACATTCATCTGTGTCAAAAGTCGGAAAGACAATTGATCGC
AATTTCATATCAGATTTCAATTCAGTTTCTCAAGAGGAGTTCTTCTCAGA
GGAATCCAAAACCCGCTTCCTCCATCAAGTCATTCTTGAGCACTTTTATA
GACAAGGACGCCTGGAAATTAGCGATATATTAAGTAAAGAGGCTCAAATT
AACGAATATCAAGCCCTTAAAGAACCGTTCTTTGACTTAAATTCAATCCT
CGAGTCGTTAAGGAACAAAGACTCTGGCCCTGCACTTACATGGGCTTTTA
CTCTTCGGTCAGAATGGAATGCAAGGGTGAAATATGGGCCATATGTAAAG
AATGTTCAAAGCGACGGAAATATAGGTTCTCCTTTGGAGCTGCGTTTACA
TAGACTACGTTTCATTGAAATGCTTCGCTCTGGCAAAAGATTAGAAGCCA
TCAAATATGCACGCCAACATTTCCCCCAATTTGTTGATGGGCATGAAAAA
GAGATTCAGTGTTTGATGGGTGCCTGCATGTACCCTAATATAGCAGAATC
TCCTTATGCCCACTTGCTTAGCCCCTCACTATGGACTGATGCTTGTGATC
ATTTTGTCCGAGAGGCTTMTGCATTGATGGGCGMATCTGTAGAATCTCCT
TTATCTGTTGTTATCAATGCTGGATCCCAAGCCCTGCCTGCTCTCCTCAA
TATTAAACAAGTGATGCTCCATAGACAAGTATCGGGTACACTTTGGAATG
CAAAGGACGAACTCCCCATTGAGATTGATCTAGGAAATAATTGCCGTTTT
CATTCCGTTTTTGCTTGTCCCATTCTGAGACAGCAAACGTCCGATTTAAA
TCCTCCACTTAGACTCACATGTGGTCACTGTATCTCTCGAGATGCGCTTA
CTAAGTTATCTACTGGTCAGAAGATTAAATGTCCTCTATGTCCTATAGAA
CAAAATCCTAATGATGCACGACAAATAACATTCTAA
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