EMLSAT00000003353, EMLSAT00000003353-699200 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003353
Unique NameEMLSAT00000003353-699200
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1834supercontigLSalAtl2s1834:174757..175847 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003353 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003353EMLSAG00000003353-686119Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014625EMLSAE00000014625-723553Lepeophtheirus salmonisexon
EMLSAE00000014626EMLSAE00000014626-723554Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773875auto773875Lepeophtheirus salmonispolypeptide
EMLSAP00000003353EMLSAP00000003353Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003353

>EMLSAP00000003353 ID=EMLSAP00000003353|Name=EMLSAP00000003353|organism=Lepeophtheirus salmonis|type=polypeptide|length=280bp
MYSFINAFYKSTLIYCFVKQFPTDFNTHHSSIINMKVFIAFSTLLALASA
DQSSHQTIQHGHAAPVHTSIHKPHGSYHASVVSQPAADPNDVHNPYNADY
KPIAAVHAPAHVPVHSSYSPSSYHPAPYHSAPVVHRPAVYHPAPIHRPAV
YHTAPAVHRPAPYHPAPPTYHSAPVVHKSSPYHAAESYADTPAVYQYGYA
VADDYSGTNFAANENRDGYSTYGEYRVALPDGRTQVVNYNVADAYSGTVA
DVKYEGTAHYDTYKPAPYHPAPHHLAPYHA
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mRNA from alignment at LSalAtl2s1834:174757..175847+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003353-699200 ID=EMLSAT00000003353-699200|Name=EMLSAT00000003353|organism=Lepeophtheirus salmonis|type=mRNA|length=1091bp|location=Sequence derived from alignment at LSalAtl2s1834:174757..175847+ (Lepeophtheirus salmonis)
GCTACGCACTCAACAGAATTATTTAAAAAAAAGCGTTGGGTGTTGTCTAT
TTGACAACTGTTTTACGAAATGTACTCTTTTATCAACGCATTCTATAAAA
GCACTTTGATTTACTGTTTTGTTAAGCAGTTTCCCACTGATTTCAATACT
CATCACAGTAGCATCATAAACATGAAGGTAGATCCATTCTATTATTCATA
TCATGGATTCATTAAACAAAATATTATATTTTTCTTACAGGTATTTATTG
CATTTTCCACACTCCTGGCTCTTGCCTCAGCTGATCAATCCAGTCATCAA
ACCATACAACACGGGCATGCTGCTCCCGTTCATACTTCCATCCACAAACC
TCACGGAAGTTATCATGCATCTGTAGTCAGTCAGCCTGCTGCAGATCCCA
ATGATGTTCACAACCCTTACAACGCTGACTACAAGCCTATTGCTGCTGTT
CACGCTCCTGCCCATGTCCCTGTTCATTCTTCTTATAGCCCATCTTCTTA
CCACCCAGCTCCCTACCACTCTGCCCCTGTTGTTCACAGACCAGCTGTCT
ATCATCCAGCTCCTATTCACAGACCAGCTGTCTACCACACAGCCCCTGCT
GTTCACAGACCTGCTCCATACCACCCTGCCCCTCCTACATACCACTCAGC
TCCAGTCGTCCACAAGTCTTCTCCTTATCACGCTGCTGAGTCATATGCTG
ACACACCAGCCGTCTACCAATACGGGTATGCCGTCGCTGATGACTACTCT
GGAACCAACTTTGCAGCCAACGAAAACAGAGACGGATACTCCACCTACGG
TGAATACAGAGTTGCTCTCCCTGATGGTCGTACTCAAGTCGTCAACTACA
ACGTTGCGGATGCTTACTCTGGAACTGTCGCTGATGTCAAATATGAGGGA
ACAGCTCACTATGACACCTACAAGCCAGCTCCCTATCATCCTGCTCCTCA
TCACCTAGCTCCTTATCATGCCTAAGATTATTATACAATCATTCTTCTTA
AGAATATATTTATTTTGAAATAAAGAGTTAAAATTGTAACCTATATCTTT
ATGTTTATGCTAAATACTATTTTATACTCGTTAACTCAGGG
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