EMLSAT00000003358, EMLSAT00000003358-699205 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003358
Unique NameEMLSAT00000003358-699205
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s183supercontigLSalAtl2s183:541770..542708 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003358 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003358EMLSAG00000003358-686124Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014638EMLSAE00000014638-723566Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778494auto778494Lepeophtheirus salmonispolypeptide
EMLSAP00000003358EMLSAP00000003358Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003358

>EMLSAP00000003358 ID=EMLSAP00000003358|Name=EMLSAP00000003358|organism=Lepeophtheirus salmonis|type=polypeptide|length=312bp
MKAFILFLNYFILSVSSHCQAPFPQCCPKGMVYDMKTCRPILGASITKLT
XLELQQSKTNXPPPAVNIPHCINESAKLVSFAGETEYSQIYDGIYATRIT
LEDSGEERLSYFNNHRQTYFPAFCFHESLKGKALICPSTQLERAQIKKCC
PFGEKLGLPLFEGCFKSDSNFEWNIRVNGYKKVLKDLIKFPYENVIHKGS
EFLKILQSNSCDLEQVRAFDIEAFEINMKGDLVFANGKAVDISNDGYCVD
SVQDPSVAIDQQLMVVLYCSSNKKVTKIANSEFKDFLNVKSGAITRSFSL
IWMSTFLLAFHA
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mRNA from alignment at LSalAtl2s183:541770..542708-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003358-699205 ID=EMLSAT00000003358-699205|Name=EMLSAT00000003358|organism=Lepeophtheirus salmonis|type=mRNA|length=939bp|location=Sequence derived from alignment at LSalAtl2s183:541770..542708- (Lepeophtheirus salmonis)
ATGAAAGCATTTATACTCTTCTTGAATTACTTTATTCTCTCGGTTTCAAG
TCACTGTCAGGCTCCCTTCCCTCAATGCTGCCCAAAGGGAATGGTCTATG
ACATGAAAACATGTCGCCCCATACTTGGCGCAAGCATTACAAAGTTAACG
GMCCTTGAGTTGCAACAGAGTAAAACCAATTSCCCTCCYCCTGCCGTCAA
CATACCACACTGTATCAATGAATCAGCCAAATTGGTATCCTTTGCGGGAG
AGACAGAGTATTCTCAGATCTACGATGGGATCTACGCCACAAGGATCACT
CTAGAAGACTCTGGTGAAGAGCGCCTCTCCTACTTCAATAATCATCGCCA
GACTTACTTCCCTGCATTTTGTTTCCACGAATCTCTCAAAGGAAAGGCCC
TCATTTGTCCAAGCACACAACTAGAGCGCGCTCAAATTAAGAAGTGTTGT
CCGTTTGGAGAGAAGCTAGGACTACCGCTCTTTGAGGGTTGTTTTAAATC
CGACTCAAATTTTGAGTGGAACATCCGTGTTAATGGATACAAAAAAGTTC
TCAAGGATCTCATCAAGTTCCCCTATGAGAACGTGATCCACAAGGGTTCT
GAATTTCTCAAGATACTTCAATCCAACTCCTGTGATCTTGAACAGGTGAG
AGCGTTTGATATTGAGGCATTTGAAATCAACATGAAAGGGGATCTCGTCT
TTGCAAATGGAAAGGCAGTTGATATAAGCAATGATGGATATTGTGTGGAC
TCTGTTCAGGATCCAAGCGTGGCGATTGATCAGCAGCTCATGGTAGTTCT
CTATTGCTCATCTAATAAGAAAGTGACAAAGATTGCCAATTCAGAATTTA
AAGACTTTTTGAATGTAAAAAGTGGAGCAATAACTCGATCTTTTAGTCTC
ATTTGGATGTCTACATTTCTCCTTGCATTTCATGCTTAG
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