EMLSAT00000003384, EMLSAT00000003384-699231 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003384
Unique NameEMLSAT00000003384-699231
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1865supercontigLSalAtl2s1865:52365..54222 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003384 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003384EMLSAG00000003384-686150Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014766EMLSAE00000014766-723694Lepeophtheirus salmonisexon
EMLSAE00000014767EMLSAE00000014767-723695Lepeophtheirus salmonisexon
EMLSAE00000014768EMLSAE00000014768-723696Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770744auto770744Lepeophtheirus salmonispolypeptide
EMLSAP00000003384EMLSAP00000003384Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003384

>EMLSAP00000003384 ID=EMLSAP00000003384|Name=EMLSAP00000003384|organism=Lepeophtheirus salmonis|type=polypeptide|length=424bp
MTVAEERREVVQGLNYLPNSNTRQHAKREWKMRDDHECKEKGPYSYLLDS
KDDDEPPYIQSKTGNIIIDVGGQIHNTRIDNLKNFLPASRLGKLVRAKSL
IDVLKLCDAYVEEEKQESEKKAKDIIIQRAKEETFGDTRLAKVRKRLWNL
IEYPESGKDAQIMAFFSLIVVIVSXGTFILGTLEEFRELEHGEVIREGET
YYPNVVFAISIFDTLCVAFFTIEYSIRLICCPVKLRFVLEPMNLVDLFAI
LPFYLSLFLRSLEDIQIIVRHFAGLQSLIHTMKQAYKELGLLLLLIGVAV
LTVAXLXXFXEXEGSGWTFVDSFWFSLMTLTTVGYDLNPSTLGGKITGGF
CALMGIFILTLPIPIVVNSFASYYKNRLWRNEVAAKKRERIRETGNVGVL
SLMEGIETSDSYSELYGIEMKELS
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mRNA from alignment at LSalAtl2s1865:52365..54222-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003384-699231 ID=EMLSAT00000003384-699231|Name=EMLSAT00000003384|organism=Lepeophtheirus salmonis|type=mRNA|length=1858bp|location=Sequence derived from alignment at LSalAtl2s1865:52365..54222- (Lepeophtheirus salmonis)
ATGACTGTTGCTGAGGAGCGACGCGAAGTCGTACAAGGTCTTAACTATTT ACCAAACTCTAACACAAGGCAACATGCAAAGCGAGAATGGAAAATGCGAG ATGACCATGAATGCAAAGAAAAAGGTCCTTATTCCTATCTCCTTGACTCC AAAGATGATGACGAACCTCCTTATATTCAGAGTAAAACAGGGAATATCAT CATTGATGTTGGAGGTCAAATCCACAACACTCGAATAGACAATTTGAAAA ACTTTTTGCCAGCATCCCGGCTTGGGAAATTAGTTCGTGCCAAAAGTCTT ATTGACGTCTTGAAATTATGTGATGCCTACGTTGAAGAAGAAAGTAATAA TTCTCCTATCGTGTTCTATGATAGGAATGGACAAGGCTTTAATACTATTC TGGATATTTATCGATTCCAAATCCTTCATTTTACGGAANNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNCCTAAAGTATTATCCCGAGATGGAAAT TTGTGTAAAAGAACAAGAAAGTGAAAAAAAAGCAAAGGACATAATTATTC AACGGGCTAAGGAAGAAACGTTTGGAGATACACGACTAGCAAAAGTTCGG AAACGGTTATGGAATCTAATAGAATATCCAGAGAGTGGGAAAGACGCTCA AATCATGGCATTTTTTAGTCTGATTGTTGTGATTGTTTCCAYAGGGACTT TCATCCTTGGAACACTGGAAGAATTTCGAGAATTGGAGCATGGAGAGGTC ATTCGTGAAGGAGAAACTTACTATCCTAACGTMGTCTTTGCTATTTCCAT CTTTGATACGCTATGTGTGGCCTTTTTTACAATCGAGTACAGTATTAGAC TCATTTGTTGTCCTGTCAAACTTCGCTTCGTCCTTGAGCCCATGAACCTA GTGGATCTTTTTGCCATTCTACCCTTTTACCTCTCCCTTTTCCTWCGGAG CYTAGAGGACATACAAATCATCGGTAAAGCTGGGAAAATCATTCGTCTTG TACGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNTCATGSGGATTTTACGTGTATTCAAATTAGTTCGTCACTTTG CCGGACTCCAAAGTCTTATTCACACTATGAAACAAGCCTACAAAGAGTTG GGTCTACTTCTTCTTCTTATCGGAGTTGCTGTGCTCACAGTGGCTTMRCT CKTTTWCTTTWCAGAAAYAGAAGGCTCAGGCTGGACATTTGTTGACTCTT TTTGGTTCAGTCTCATGACCCTTACAACAGTCGGCTATGACTTAAATCCC TCTACACTCGGTGGAAAAATTACAGGTGGATTCTGCGCTCTCATGGGGAT ATTCATTCTGACATTGCCCATTCCAATTGTTGTGAACAGCTTTGCTTCCT ACTACAAGAATCGGCTTTGGAGAAATGAGGTAGCTGCTAAAAAGCGGGAA CGGATTAGGGAGACGGGGAACGTTGGTGTACTGAGTCTTATGGAAGGGAT TGAAACGTCTGATTCATACAGTGAGTTGTATGGAATTGAAATGAAAGAAT TGTCTTGA
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