EMLSAT00000003461, EMLSAT00000003461-699308 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003461
Unique NameEMLSAT00000003461-699308
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s18supercontigLSalAtl2s18:1046240..1047427 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003461 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003461EMLSAG00000003461-686227Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000015058EMLSAE00000015058-723986Lepeophtheirus salmonisexon
EMLSAE00000015059EMLSAE00000015059-723987Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780312auto780312Lepeophtheirus salmonispolypeptide
EMLSAP00000003461EMLSAP00000003461Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003461

>EMLSAP00000003461 ID=EMLSAP00000003461|Name=EMLSAP00000003461|organism=Lepeophtheirus salmonis|type=polypeptide|length=217bp
MIPVLIGSYNPNHQRCRRGKYAIKTNTCLPSFSSEELKVINDVQEIGSGV
RCITQVIPKCRKVKKVVNKKICYNTYIESSEYSKVETHEISYTNEKKDLL
SIDCWEERYKTVGHHHIGHWFCDSQCKNNHFKVPSQSRPIVKDVTCNGVT
SKKVCIPYKIELEENVCKEEKVKKCITINTLVHRNATYHHSNYELTKPRC
TWRRLILHYKKCDSKQY
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mRNA from alignment at LSalAtl2s18:1046240..1047427+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003461-699308 ID=EMLSAT00000003461-699308|Name=EMLSAT00000003461|organism=Lepeophtheirus salmonis|type=mRNA|length=1188bp|location=Sequence derived from alignment at LSalAtl2s18:1046240..1047427+ (Lepeophtheirus salmonis)
ACTCAGAGCCTAATAGTTATTCTAATGATTCCTGTACTAATTGGCTCATA
TAATCCTAATCATCAGAGGTGTCGAAGAGGAAAATATGCAATCAAAACCA
ATACTTGTCTACCCTCTTTCAGTTCTGAGGAACTCAAAGTTATCAATGAT
GTTCAGGAAATAGGTTCAGGCGTACGCTGTATTACACAAGTGATTCCAAA
ATGTAGAAAAGTAAAAAAAGTTGTCAATAAGAAGATTTGTTATAACACTT
ATATAGAGTCTTCAGAATATTCAAAAGTAGAAACACATGAGGTGAGTTAT
TTAACTGTTTTGGTATCTAATTAAACTTGTGATTTCTTTTATGCAGATAT
CCTATACAAATGAAAAGAAAGATCTTCTCTCAATTGACTGCTGGGAGGAA
CGCTATAAAACCGTTGGACATCATCACATAGGCCATTGGTTTTGTGACTC
TCAATGTAAAAATAATCATTTCAAAGTACCATCACAATCCAGGCCGATTG
TGAAAGATGTGACCTGCAATGGAGTAACCTCAAAGAAGGTTTGCATTCCT
TATAAAATCGAATTAGAAGAAAACGTTTGTAAGGAAGAAAAAGTGAAGAA
ATGCATCACGATAAACACATTAGTTCATCGTAACGCTACGTATCATCACA
GTAACTACGAGCTTACAAAGCCTAGGTGTACATGGAGACGGCTCATACTT
CATTATAAAAAATGCGATTCAAAACAATATTAGTTTTTAACGGATTAAAA
AACAAACATATTTGAAGGGGGAAAAAAGATTTTTATACAAATAAAGTTTT
GCATTTACAATTCATTGATTATTGGCAACATTTCTTTCAATACGTTTTCA
TTTCCCATTAGGAATGACAAAAAAAAAACTAGTTTTTTCATTTTTGAAAA
TGTCTAAGTCTCAAAGAAATTAAATCGTGTTTAAATTTATTATTTAAAAT
CTAATGGGATGTCTCAAGTTACTCCCTCTCATATCATAAATTTCTAAATT
GCTTAAAAATATTGTTAATACCCTTCGTTTATTTTGAGAAGAATATGCCT
TAAAGGATTTATCATTGTGTATAGACAAAGTTGTTTCATTTTATCTATCA
ATGAGGCGTAAAATAAGGGGGGAGACCGTTCTAGGACATTTACTCCTCGC
AAAACTATTATCCCATACCACCAACTCCAATAATTACC
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