EMLSAT00000003498, EMLSAT00000003498-699345 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003498
Unique NameEMLSAT00000003498-699345
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1910supercontigLSalAtl2s1910:42262..46415 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003498 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003498EMLSAG00000003498-686264Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000015209EMLSAE00000015209-724137Lepeophtheirus salmonisexon
EMLSAE00000015210EMLSAE00000015210-724138Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770507auto770507Lepeophtheirus salmonispolypeptide
EMLSAP00000003498EMLSAP00000003498Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003498

>EMLSAP00000003498 ID=EMLSAP00000003498|Name=EMLSAP00000003498|organism=Lepeophtheirus salmonis|type=polypeptide|length=134bp
MIMEQRIRNTIGLFLVLFSAECNSIVLFDAAPQTSPAFIDYSSYEPKVIN
SARQDSQDSNSLFPKERAVNGDDEQVEEQPEENISSDEFPFHKIVRILAP
QQLTKPNVVRRNYLRFGKKRSSPKKSSRIRKKRL
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mRNA from alignment at LSalAtl2s1910:42262..46415-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003498-699345 ID=EMLSAT00000003498-699345|Name=EMLSAT00000003498|organism=Lepeophtheirus salmonis|type=mRNA|length=4154bp|location=Sequence derived from alignment at LSalAtl2s1910:42262..46415- (Lepeophtheirus salmonis)
ATGATAATGGAGCAACGGATTCGCAATACAATAGGTTTATTTCTCGTTCT
GTTCTCTGCAGAATGTAATTCAATAGTCTTGTTTGACGCGGCTCCACAAA
CATCCCCCGCTTTCATCGATTATTCATCCTATGAACCCAAAGTGATCAAC
AGTGCCAGACAGGATTCTCAAGATTCAAATTCACTCTTTCCTAAAGAAAG
AGCCGTCAATGGAGATGATGAACAAGTGGAGGAGCAGCCGGAAGAGAATA
TCAGCTCAGATGAATTCCCTTTTCATAAAATTGTGAGGATTTTAGCTCCA
CAACAACTCACAAAACCAAATGTTGTTCGGAGAAATTACCTTCGATTTGG
TAAAAAGAGATCATCTCCAAAAAAATCCTCCAGGATTAGAAAGAAGAGAT
TATAGGTATGAGCCATCATGCTAAGGTGTATATTATAAACTCAGGAGACA
ATGATTTTTGTCTAAAAAGTAGACTGATCAGCCGTTCAGCAGGAATAAAT
CCCTTTTCATAAAAATATATTTTTTCATACGCAAGATGCCACTTTTTATA
ATACTAGAGAGAACAGGTCTTTCGTCATTTTTGTCACTTTCTCTCATGAC
GTGTCCAACCTTTTCTTACCTTTGCATAATTCAACCTCTCAATTAAGTGA
AAGGGTGGATCTGTGGAGGTTGCAGAGTTAGTCATAGATTAATATAGAAG
TCAACTCGAGGCTCCCTGTCCTGCGTTAAAAAAACAATGACATAGACAAC
TATGTATATATTTGGAGAAATATAGATCGCATTGTCTCCGTTTTGCCACT
TGGGCTTAAAGCTTCAGTTGGTATCATTGATAAGTATAGATTGTTKGAGG
TAGCCGTTGTACCACGATTTTGTTGTCAACTGTTGCAGGAGGAACTTTTT
GACATACATTATCATATGATGGCGTTATCTGGCGAATACAGAAAGTCCCT
ATGTATTTTATTGTCAGCTGTTTATTCCCTAGTATCACTTGATACGTCGA
TGGCTATTTCATAATATATTCTTTTTGTGAAATAAACTAAATAATAGGTC
ATAATATACTTATACTCCAAATCCCAACNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNTTACAATTTTTTTGCTAATAATTATT
CTTTTTGTWWYCAACTYTTSATTTCTGGAATAATAAAATTCTCACAAATT
TAATTTAATTTTTTGAAGAAAAAAAATCCAAAAACCAAACCCTCTCTCAA
AAAATAATGTATAGATAGATCACTCTACGGACGCTTCTGATTATACAATT
CCATATACACTCAGATTGTTTTAATTTAAGAAATCCTTGCCAATCAAATA
GGAAGTTTTTCTTGACGTCATATATCCTATGTTTTGATAAGAGACAGCTA
CAAAAAAGATAATAATAGTCTTCATATTCTTTAGACTAAAATCATGAATC
ATGAGTATTTAAGAAAGTAAATTTATTAGGTCATGTACCTATGTATCAAG
ATTTATAGCTTTGTGTCCGATCGTCTGCGTACATACATACTTTTAATGAT
TTCTAAAATAAATACATATCTTGATGGTCAAGAAACCTACATTTTCATTG
TGATAACGCTGGAATATGATTGATATGATTTCCGTTTTATCATAAGCAAT
TAAATTATCCTTATTGGATATTGTCAATGTTCGATCCAGGATGATATATA
TTGTATTTTATTTCTTTTTTGAGTTCAAAGAGACTTTCGTACAAAAAATA
AATAGAAAAAACATTAATAGTACAAGGACAAAAATGGTTTATGTAATTTT
CCAGGTGCTAGAATTTTTTTGGTTTTCAAATGAAAAAATTTAACAGAAAA
ATTAATTTATTTTCTTAAAAATAAGAGGATTCAGATAAATTTTTGTAAAA
AGCTTTGAATTTGGATCCAAAAAATTTAATATATGAAATTAAATTTTCTG
TAAATAGTTAAATCAAAAAATTTATGTTTAAAATTTTTTGTGAATAGCTT
TAGAATTTACAAAAAAAAAGTAAATCTTTGGATTTTTTTTCTTTAAAATG
AAAAAAGACAAAAAATGTATATCTCTTTAGGCCTGTTTTTTAATATTTGT
CAGACACTAAAATGTATTTCAAATATGCCATTACATGGTTATACAATCAT
ATTTATATATAGTAGATACAAATTGACTATAACAGGTAGCGTTTTGTTAG
CACTTATTTAGGACTGTAGACTGTTGTCCCGCCACGTTCAGTCCTGTATA
TCAATTAGAGGTGAATTCGGTCTAGCCCAGCCCTTTGAACCTCATTTAGC
CAAGCCCAAAAGTACATGGCTCGAATCTTCCAGCCCAACCATTGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NGAACAACCTTTCCTAAATAGATTCCATTATATTCAAGAACTTTTTGCAC
AATTATGAGATATATTTGTTAGTCCCTGTTGGACTCAGAGTAGAATTGGG
TACCGAAATCGGATTAATTCTAGCAAATTTAATTGTTTATATCCTTTTCT
CCTTCCTGTTTTGTAATAGCTGATTGTAACTGATCTAATGAAACGTCATG
AGTATTATTCTTTCTCTTCTCCAAAGCAGACTTAAAATTGGCAGGGTTAC
CATGTTGATTTTCGGTTTCTTTTTTTAATTTGTCCATTCTACACTGGGTT
TTCATCATTGATGAAAACATTCATTAAAGTAATGACGAAGCATTATGATG
ACATAAAACTAGACAAAAATGATTACGATGAATTAATTATAATCTCGTCC
ATGACATTAAATTAAAATATGACTTCTTAAGTATTTATTATCATTAAAAT
CCTATTTTCCTGATTGATTTCGTACCGATATTTGTTTAACTCCTGATGTT
AAATCAACAATCAATACTATAAATTTAAAAAAATAGGCATTTTTGTAATA
TTCGAAAAGTCAAAAACCATCCAAATAAGTTATAATAAGATTTTTTTAAA
CTAGAACTAATATTAAACTTCCATATTATAATATTGCTTTTTTAAATATT
TTATTTAAAGCGTCGCTATACATTTGTATTTCTGTACGATAGCCAAAATA
TCAGCTGTCAATAAAATAAATAGGGTATTTATTATTTACTAATTATGTGT
TAGCGAGGTAAAGGCGTCCGTACAATGGGAAAACAATCATTTTTCTAACC
AATCTAGAACAGTCAAGATCAGTCATGTACCAAATTGGTTTTCTTTCACA
AAAATAAATCACACTTTGTAACGTGTCCCGAATTCCTCCAAACCGAAATC
CAACACTAATACAAACTTCTATATTACAGGGAATTTGTTCGATTTGGCAA
ACGC
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