EMLSAT00000003515, EMLSAT00000003515-699362 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003515
Unique NameEMLSAT00000003515-699362
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s191supercontigLSalAtl2s191:6249..9076 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003515 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003515EMLSAG00000003515-686281Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000015297EMLSAE00000015297-724225Lepeophtheirus salmonisexon
EMLSAE00000015298EMLSAE00000015298-724226Lepeophtheirus salmonisexon
EMLSAE00000015299EMLSAE00000015299-724227Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768637auto768637Lepeophtheirus salmonispolypeptide
EMLSAP00000003515EMLSAP00000003515Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003515

>EMLSAP00000003515 ID=EMLSAP00000003515|Name=EMLSAP00000003515|organism=Lepeophtheirus salmonis|type=polypeptide|length=708bp
MATVISRFVKMSLSEEERPSLTAEDSDDSGVHLKQSRMSDCDPDSDGRTQ
GCVEMDFSQKIHKSCSLSDQMTIEGCLLWAKIRGFSYWPGITTVDPYEGV
TSKVIESSKRTKTHIHFLAYDNLRAWVNESDVLSYEGYEKFKELAYKFPK
RKKDFEPGKKFRNIFERAVKEAEAXMCIPVALRLEKLGFVYIPTNIDGAT
RNVLAKKKKSRRRSSKTSESENISSKFPLYQTVSRNDHQNIQGRQLPRRN
PSHLIDTKSKDIYEFVDDETNASDSDLLSDYENTCDNTKDNLPKLGTLIW
GHMAGFPYWPCFVTRSSDGDYIREAKNKISVHVQFFNWNDESGWVTKTMP
WCSVAEFRRFAKEAIKEDVSCSMDWSPVGKMLHKWKNAALQAESTVHLSR
KERHKRFLVKIKKNIVMNRRIINNGFRVSDDHININASKSPISKFKTPPP
PIVTTSTRLPPGWIIRCYKEEDYGKESRTEYQSPDGAVFLKIENAISYLF
QQNNSGIRKRSYSTPGGCIASDYSSLSCLSPSPACKKRRLDAGWFIYESD
QHRYSSXLLHTSLPRGWSVKRIRMGRNPEVQSSYLSPECKTYSKVPQEWP
SRREFFSKAAAASYLEGMGHPAVELEHVIVTGMIQCLSRKDHFLKVDDYL
DYRLSETPELRKIVDPTFVKVTPLPKDIYRHSSVLVEEKDGKFQLKDVNS
VPLSLNGN
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mRNA from alignment at LSalAtl2s191:6249..9076-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003515-699362 ID=EMLSAT00000003515-699362|Name=EMLSAT00000003515|organism=Lepeophtheirus salmonis|type=mRNA|length=2828bp|location=Sequence derived from alignment at LSalAtl2s191:6249..9076- (Lepeophtheirus salmonis)
ATGGCGACTGTCATATCAAGGTTTGTATTTGAACTTGATATAAAGAACTA
GTATATGTACATTCAAAAAGGGAAGAATCAAATCATTAGCAAAAGAATCC
TTTTGACATTGTCCTCCTTAATTTATCTAATGGATGAGGATTTCAACGTT
AGATCCATTGTTTGCTAAATAGTTGATATCCAAGTGAGGAGGCCGATTGT
TATGAATTATGAGCTTATTTCGTTATTCATCTATGTTCTGAGACAGATCT
TCCATATTTTATTTATTGATCATCATTATGTATTACAAGTTACAAAGATT
ATATTTTTATAATCAAATAACTAATCAGGGTTGTCATTGTATATATCTTA
TTTTCATTAATTGTATCAAATAGAATAACACATCTTATAGTTTATCCAAT
GATGTGAACATCATGATAATGACCTGTTCATTTCAAATTCATGACAGTGC
ATTCAAAACTTTGGGTTGCAGTTCAAATTGGATACATTTTAATCACTTAT
CGCGTTTTTTATAAATATATATTAATATATAGTTCTAAAAACGCTCATTT
TTTTTTTTTTTCTAGGATCTAAAAAGKGATCACAAGAACTAACTTTAAAT
ATCAAGCCCATGGATTTATAAATACCCATTGTTACAAGATAGAATATTTA
TAAATAACTACCATTGAAGGTTTGTAAAAATGAGCTTATCAGAAGAAGAA
CGACCTTCATTAACAGCAGAAGATTCAGATGACTCGGGAGTTCATTTAAA
ACAATCAAGAATGTCGGACTGTGATCCGGATTCAGATGGTAGAACTCAGG
GATGTGTTGAAATGGATTTTTCTCAGAAGATACACAAGTCATGTTCGCTG
AGTGATCAAATGACTATAGAAGGTTGTCTTCTCTGGGCTAAAATTAGAGG
GTTTTCTTATTGGCCTGGAATAACTACAGTTGATCCATACGAAGGAGTTA
CGAGCAAAGTTATAGAATCATCCAAGCGTACGAAGACTCATATTCATTTC
TTGGCATATGATAATCTACGCGCTTGGGTAAATGAATCGGATGTATTGTC
CTATGAAGGTTATGAAAAGTTTAAGGAGCTTGCATATAAATTTCCAAAGA
GGAAAAAGGATTTTGAGCCAGGGAAAAAGTTCCGTAATATTTTCGAACGG
GCTGTTAAGGAAGCAGAGGCTGKTATGTGTATCCCTGTTGCATTGAGATT
GGAAAAACTAGGATTTGTATATATTCCAACAAATATTGATGGGGCAACAC
GAAATGTACTTGCTAAGAAAAAGAAAAGTAGGCGAAGGAGTAGTAAGACC
TCCGAGTCTGAAAATATTAGCAGTAAGTTTCCTCTATACCAAACTGTATC
TCGCAACGATCATCAAAATATTCAAGGTCGACAATTACCTCGAAGAAACC
CATCTCATTTAATCGATACTAAATCCAAAGATATTTACGAATTTGTTGAT
GATGAGACAAATGCTTCAGATTCTGATCTCTTGTCTGATTATGAAAATAC
TTGTGATAATACCAAAGACAACTTGCCAAAACTTGGAACTTTAATATGGG
GTCACATGGCTGGGTTCCCTTACTGGCCTTGTTTTGTGACTCGAAGTTCT
GATGGGGATTACATAAGAGAGGCTAAAAACAAGATATCTGTGCATGTTCA
ATTTTTCAATTGGAATGATGAGTCTGGTTGGGTAACTAAGACAATGCCTT
GGTGCTCTGTGGCAGAATTTCGTAGATTTGCCAAAGAAGCCATTAAAGAG
GATGTTAGTTGTTCAATGGATTGGAGCCCTGTTGGAAAGATGCTACATAA
GTGGAAGAATGCTGCATTACAAGCTGAGTCAACCGTTCATTTATCTCGGA
AGGAAAGGCATAAAAGATTCTTAGTTAAAATAAAGAAGAATATAGTAATG
AATCGAAGAATAATTAATAATGGTTTCAGAGTGTCTGATGACCATATTAA
TATCAATGCTTCAAAATCTCCCATTTCTAAGTTTAAAACMCCTCCCCCTC
CCATTGTTACAACTTCTACTCGTTTACCTCCAGGTTGGATCATCCGTTGT
TACAAAGAAGAAGACTATGGAAAGGAATCAAGAACTGAGTATCAGAGTCC
AGATGGTGCGGTTTTCCTTAAAATTGAGAACGCTATATCGTATTTGTTCC
AACAAAATAACTCTGGAATAAGAAAACGGTCCTACTCTACCCCTGGTGGT
TGTATAGCATCTGATTATTCAAGTTTATCATGTCTTTCCCCCAGTCCTGC
TTGTAAAAAACGTCGTTTAGATGCTGGATGGTTCATTTATGAGTCAGATC
AACATAGATATTCTTCTMCMCTCCTCCGTCCACAAATTAATTATCTAGAT
TTAGACGATTCTGTACANGTATATTCAAGATACTTCTCTTCCACGGGGTT
GGTCAGTCAAACGCATTAGAATGGGAAGAAATCCTGAGGTGCAATCATCC
TATTTATCACCAGAATGTAAAACATACTCGAAAGTTCCACAAGAATGGCC
ATCACGAAGAGAGTTTTTCTCAAAAGCCGCAGCTGCCTCTTATCTCGAAG
GAATGGGCCATCCAGCAGTTGAGCTTGAACATGTCATTGTTACAGGGATG
ATCCAATGTCTCTCGCGTAAAGATCATTTTTTGAAAGTTGATGACTACTT
GGATTATCGACTTTCAGAGACCCCTGAGCTGCGAAAAATTGTTGATCCAA
CATTTGTAAAAGTGACTCCACTTCCAAAAGATATCTATAGACATTCAAGT
GTTCTTGTTGAGGAGAAAGATGGAAAATTCCAATTGAAAGATGTTAATTC
TGTTCCTCTTTCTTTAAATGGAAATTAA
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