EMLSAT00000003544, EMLSAT00000003544-699391 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003544
Unique NameEMLSAT00000003544-699391
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s194supercontigLSalAtl2s194:214320..215229 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003544 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003544EMLSAG00000003544-686310Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000015422EMLSAE00000015422-724350Lepeophtheirus salmonisexon
EMLSAE00000015423EMLSAE00000015423-724351Lepeophtheirus salmonisexon
EMLSAE00000015424EMLSAE00000015424-724352Lepeophtheirus salmonisexon
EMLSAE00000015425EMLSAE00000015425-724353Lepeophtheirus salmonisexon
EMLSAE00000015426EMLSAE00000015426-724354Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774649auto774649Lepeophtheirus salmonispolypeptide
EMLSAP00000003544EMLSAP00000003544Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003544

>EMLSAP00000003544 ID=EMLSAP00000003544|Name=EMLSAP00000003544|organism=Lepeophtheirus salmonis|type=polypeptide|length=217bp
MFEIVQINHYISPSPLKVNTMIKHAKVLFMLFYSLIGLSLGSNIDYENLY
ENLSTEELKNLIKEIDYMEDELRVNPDDYYDEWTLPKINTRSDEDKDYAT
KAEALSXKNPSIRXNNQGNKAVLPAYCDPPNPCPIGYTSNDGCIDDFENS
SDYSRNFQSTQNCLCDSEHMFNCPDEKIPEDKSFLASLPDITDDASIRNP
FFAGQRLPIAAKKGFAF
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mRNA from alignment at LSalAtl2s194:214320..215229-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003544-699391 ID=EMLSAT00000003544-699391|Name=EMLSAT00000003544|organism=Lepeophtheirus salmonis|type=mRNA|length=910bp|location=Sequence derived from alignment at LSalAtl2s194:214320..215229- (Lepeophtheirus salmonis)
ATGTTTGAAATCGTACAAATAAATCATTATATAAGTCCTTCTCCACTGAA
AGGTAACAATATTGTCATTAAAATTAGAAGTATATTCATTATGATTAATT
TGCAACTCGATTTCAACAGTAAATACAATGATCAAACATGCCAAGGTACT
ATTCATGCTATTTTATTCATTGATTGGACTTAGTTTGGGGTCAAATATTG
ACTATGAAAATTTGTATGAGGTAAGTTAACAATTTTTTTTTTACATATGG
TTGGTTATATATGTTGTGAGTTGTTTTTTAATTGATTTAGAACTTATCTA
CTGAGGAACTAAAGAATCTCATTAAGGAAATTGATTATATGGAAGATGAG
TTGCGGTAAACATATGTGAGTGATTTAAATAAAAGTAAAACTTTGAATTA
ATTTTAGGGTTAATCCTGATGACTACTATGATGAATGGACATTACCAAAA
ATAAACACTCGCTCTGATGAGGATAAAGACTATGCTACAAAAGCTGAAGG
TAGGTATTCATTGTTATCTCAATAGATATTTGAGGCTAAAACAACCTTTT
ACACCCCTCAATTTAGCCTTGAGTCWAAAGAACCCATCCATTCGTGSAAA
TAACCAAGGCAACAAGGCTGTTCTTCCAGCCTACTGCGACCCACCTAATC
CTTGCCCCATCGGATATACTTCAAATGACGGATGCATAGATGACTTTGAG
AATTCTTCTGATTATAGCCGCAATTTCCAGTCCACTCAAAACTGTCTCTG
TGATTCTGAACATATGTTCAATTGCCCTGATGAGAAGATACCCGAAGATA
AATCATTTTTGGCTAGTCTTCCAGACATCACAGATGATGCTTCTATTCGA
AATCCATTCTTCGCTGGACAAAGGCTTCCTATTGCCGCAAAGAAGGGATT
TGCCTTTTGA
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