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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s197 | supercontig | LSalAtl2s197:385553..390105 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000003606 >EMLSAP00000003606 ID=EMLSAP00000003606|Name=EMLSAP00000003606|organism=Lepeophtheirus salmonis|type=polypeptide|length=155bp
MPTTLEVKHEYLQGWPGRVKLGELIVGILALACCAPGFHSTQHWFLLVAS
IAFLGTLFFTAFYLFLDVNLRNYNVNWLQVEFWFTTAITFFYFTAFVAQL
AEFAGLGSSTWVDLQVAAGVFGLFNDILYGIGAYFVYLEWKANPLGPGEA
LPPSV back to topmRNA from alignment at LSalAtl2s197:385553..390105+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000003606-699453 ID=EMLSAT00000003606-699453|Name=EMLSAT00000003606|organism=Lepeophtheirus salmonis|type=mRNA|length=4553bp|location=Sequence derived from alignment at LSalAtl2s197:385553..390105+ (Lepeophtheirus salmonis)
GTGTGTAAAGCGTACGCGTTTGGCCCCTCCTCCTCCTATGTACATTTCCC
CAGATGCGCAGATTTCCTTCAGCATAGGAGTAGCAACCTTTAAAATAAAA
ATACGGGAGCATGATTTCCCCCCTCCCCTCTTTTCTCTCTTTTTGAATCG
GATCGGACATTGAGCCAGCCAGTTCCTAGTAGAAGATACTAACCTTCGCA
AGTGCTGCGTCAATGTGTTCATAGTTTTTGTGAGAGCCTTTTATTAAACA
AGACTTTTATTAATAATTTATTTGTAGAAAAGTGTGACCTCATTATGCCT
ACAACGCTTGAAGTGAAGCACGAATATCTACAGGGATGGCCTGGAAGAGT
TAAACTTGGAGAATTGGTAAGAAAATACTACTACATATGTACTTATTATA
TGTGTAAATATGATGAGGGAAAGCAAAAATAAAATAGGAAATCGGCCTTT
CAAAAAAATTCATACATTGCCAAGTTATTTATAACCTTAAGGACAAATCT
TGAGAGTAATTATATTGGAATGCTTGAGTATATTATGTTAAAATGTTGGG
GGGAAATGGATACCAAAGTAAGAAAGAAATCCTCACATGGGGCAAGCAAA
ACTTGTATTTAAAAAAGTAAAATAGAGTCCAAATGTATAAATATATAATA
TGTATAAAAATAAATATATTCTTAACAAAGCAAGCTTCAATTCAAAAAAG
AGTTCTTACGTAATGGACTTATGAATCTCTATACATACACATACAAGAAT
CTTTTGTTCAGTCAAACCCGAACGTGTGAGCGATCCTTTTTTAACTCATC
ATTTTAATCAGATTAAAACACTTTTGTTCTCAAATTCAATTATAATTAAA
GTATTAGTTTAGAAGTATCTTTGAAGTCTTCTTTTGAAACAAATTGTTAT
TGAATTACCTATTATTAGAATAACACTTTTATTGTGTTGATAATTAATCA
TATGAATCCTAAATATCATACGAAACAAAAAACATATTAGTACATACATT
TTTTTCCATTCTATTAATCACCTAATTATCTCCACTTCCTATGACATTTA
AAAAATTAAATATTGAAAAAAATAAAATAAAAAAAAATCCAATTGTCTGC
TTTATTACTAATGTCAATGTTTGTAAATTATTTTTTTATTTAAAAAAAAT
TGTGAAAGACTTCGATGCAAGAATCTTGAATGAGAAATTATGTATCCTTA
TTACTTTTTTTTAAGCACATACAAAAATAAATATCAAGGACAGATTTGTA
CTAAAAATATGCATTGAGCTACGTGGAAACAAGACCTGACTAGTTTTCCC
AGGTTGAGTGATTATTTAATATGGTCAAAGTTTCGTTTTTTATTTTTTAT
CTAAAAGCAAAAACTGGGTCCATTTTAAAAATAACATCTGTATTTATTTA
CACTTGCCTCATAAGTAGATTTTATCATGAAATATCCCTAAATTTCATTT
CTTACACAATATCTCCTTTCCTCTTCCAGTATATATGAACGTATATTTTG
CTGAATACACTAATTACATCGTTATCCATGTATAAAAGAGTTGAAAGATT
AAGATAAAATATCTACAAATATATATATATAAAGTTAATAAACTTATATG
TGNNNNTTACATGATTTATATGAGTTATTTTTTTGTTGCTATTTCAATAA
GAACTGTAATAGATTTWCATGTACGTAAWTTCATAAAGATTTTYTAWTKA
TAATAAWAATTTTTAGAATTTTTTAAAGTTCCTCTTCATTCATTATTTCA
AATCATATACCGGATTGTCCATTGAAATGTGATCACTTAATAATTCATTA
ATTAATGAAGGTTGAGTGATTAAAATTAATCCATACTTGGATATATTACA
GCATAAACAATTAGTTACAAGACAGAACATAGCTGAGCTCTCTACCTTAC
GTGCAAGTCGAGATAATGAGACTTAAACCTGATCGGCGAATTTCCATTCG
TGCGCTCCCTGCAGTTGGCTGTCTCCCGCAACACCTTTTACGCCATTAGA
AAGTCCAAAACGTTGAAGAGAAGAAGGGCTCTGTCAGACAGGTCAAACTG
GACCCGGAGGAGTTAAAGAGAACAGTCCAGGCCCATCCCTCTAGTCCATG
AGGGCCCATGCAAGAGATATCGTGTTTCACACAAGACTGTCCAGAAAGCT
ATAAAAAAGTGGGTGGAAAGAGCCTTGTGAGGGTGGAGAAGTCACTTTTC
TTCTTCTTTTCATTGCTGAAAGAAACTCATCTTCNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNGACTCTTTTAGTGAGTCTTTTG
AACTCTTTTTTGACATTCGACTAGACCTTTTGGGTGGATGTCGTAGTCTC
CGTCATCCAAACATAGAGGCCCTCAAAACCACTTTCAGCCAGTACTTGGA
CACCATGACAGAGGAATACATCTGCAGCAGGTCCGAGGCCTTCCATTGCC
ACCTAGAAGCCATCATTGCCGCTAAAAGCGGCTAAATTAATTATTAAGAG
AGCTCAGACACATATCTATTTATAGTATTAATTATGTTAAAATTATATTT
TAATTAATAAATTATAACTTGTTGAAGTTTCAAATTCAAAGTGTTCAGAT
TTTAATGGACCACTTGGTATATATCTAGGACCAAAAACGTAAATTTTAAT
GTTTTAAAACATACATTAAGTGAAGTAATTCTTTACTTAAATAGGATCTA
TTTGAGAATATAATATTTCAACATATTATTTCTTATGGCGGKGGGSTATG
GKCTTKCAAAWCATTCATCATAGATTGTTWATATTTAAGCAGCTCTAAAT
ATCTGGAATTAGGCTGAGCATTGGCTCTAATATGAAAAATTGACACTTTT
TAACAAAATTGATCAAACATTGTACAATTGCGCCAATTAGACAGATCTTG
TTATATAATGAATGAAGCAAGTTTTTCTTAATCTATGATTGAATACGTGA
TTCATGGTCAAACAAACTTGTGATTACATAGTTAGAAATGTAAAAGCAAA
ATCAAGTTTGCAACATAGTAACGACTTTTCGGTGACCTAGAATTAAATTG
TGCGTGAATATTTAAGGCAATTTTTAAACTATCTTATTTAGTGTACAACT
ATATTGGATAATGCATTCCAGTGAATAATTTTGCTTCCATAATATTTTTT
TTTTATTAAGCTGGTACAAATAATGCAACAATAGCTATCGACCATATTTA
AAGACCATAAATGTAAGGTATAAAATGACATACTTCGTTGAAAAATTGCA
AAAAATGACTTTGTGTGGAAATGATCAATTTTAATAATGACTTATATATA
TGTATTTTTTTAGATAGTAGGAATTTTGGCTTTAGCCTGCTGTGCTCCTG
GATTTCACAGTACACAACATTGGTTCCTCCTCGTTGCTTCCATCGCATTC
TTAGGGACACTATTTTTCACTGCCTTTTATTTATTTTTGGATGTAAATTT
ACGTAATTACAATGTGAACTGGTTGCAAGTTGTAAGTACCTTACTTTTTA
GTATCCCAATTTATAATGCATTTTGTTTTTATCGTATTTATCATAATAGG
AATTTTGGTTTACGACAGCCATAACTTTTTTCTACTTTACGGCTTTTGTA
GCACAATTAGCGGAATTTGCTGGATTAGGCAGCTCTACATGGGTTGATCT
TCAAGTAGCAGCAGGAGTAAGTCTAGAAATTAATAACATTTCTATTTAAT
ACATACATATAACTTTAAATGTTACAATATTCATACTTTCAGGTGTTTGG
ACTTTTCAATGATATCCTTTATGGAATAGGAGCTTATTTTGTATATCTAG
AATGGAAAGCAAATCCCCTTGGACCTGGAGAGGCCTTACCTCCATCAGTT
TAATAAATCCGGTTTTTTTAAAATCACTGGTTATGAAAATAGATTATTTG
AAGCCAAATAGTTTTTTAACCAATACTTTCAGCCATGTCCGCTTATAACT
ACCTATGATATTAAGGCTTCTCCTCTTATACAAATCATCTTCCTGAGGAG
TTACCTCCTAAATTTTTTTAACGCAATATCATAACTTAAATCATGGTTTA
ACGGAATTCGTTTACGGACGTTTATATTGTTTTGTTTCTTAAGATGTTAT
AAATTGAATCAGTTATATGAATCGCAACATACTATTGATTGTTTATCTTT
GATAATAATAAAAACTACCCTTAATGACCAATTTTTATACATGTTTGGTT
AATTCATAATTATATATATATTGACATTTACTAACTATGCAGGTTGATGT
TCCATGACTGATGTGGAACCCCTTTAGTTTTGCTACATTTTATAATTAGT
TTTTTTTTCTATTTAAATATTGAGTGATGAAATAAAATATTAACTGTGCC
ATAATATTAGATAATAAAATCATTCAATAAATATCTATTTGTGCTGCGGG
TAAATTATGTTTCAAAGTTTATTAGTTTTGAGATATTTTATAGCTTAGGG
GAGATTGGGGGCACTTGCAACACTTCTTGTAATTGGTTCAATTACTCCTA
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