EMLSAT00000003684, EMLSAT00000003684-699531 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003684
Unique NameEMLSAT00000003684-699531
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1supercontigLSalAtl2s1:1001708..1005062 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003684 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003684EMLSAG00000003684-686450Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000016026EMLSAE00000016026-724954Lepeophtheirus salmonisexon
EMLSAE00000016027EMLSAE00000016027-724955Lepeophtheirus salmonisexon
EMLSAE00000016028EMLSAE00000016028-724956Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780233auto780233Lepeophtheirus salmonispolypeptide
EMLSAP00000003684EMLSAP00000003684Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003684

>EMLSAP00000003684 ID=EMLSAP00000003684|Name=EMLSAP00000003684|organism=Lepeophtheirus salmonis|type=polypeptide|length=150bp
MIIVYLLLSSYFQRSSGINILCKSEKDCPKPFACFFSLLTPTKCNPPKER
NISCGKDIDGKTVPDHEVCIQDQVKTDNLKDRSLAVYRCYNSSCVNREFK
NGRAKVCIPRMFSGGYGGCINGFSCGFFLLSQTWATCVNGDCDGFIRKRQ
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mRNA from alignment at LSalAtl2s1:1001708..1005062-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003684-699531 ID=EMLSAT00000003684-699531|Name=EMLSAT00000003684|organism=Lepeophtheirus salmonis|type=mRNA|length=3355bp|location=Sequence derived from alignment at LSalAtl2s1:1001708..1005062- (Lepeophtheirus salmonis)
ATGATAATTGTGTATCTGTTGTTGTCAAGTTACTTTCAAAGAAGTTCTGG
AATTAATATTCTATGTAAAAGTGAAAAAGATTGCCCAAAGCCATTCGCAT
GTTTTTTCTCTCTTTTGACTCCAACTAAATGTAACCCACCCAAGGAAAGA
AATATATCCTGCGGTAAGGATATCGATGGAAAAACAGTTCCGGATCATGA
AGTTTGTATACAGGATCAAGTCAAAACCGTAAGTATTCAGATGCTAATTC
GATTAGGAATTTGATGAGTTTGGCAATGATGTAAATATTTTCATGTTCTG
TTTTGCAGGACAACTTGAAGGACCGGAGTCTCGCCGTGTATCGCTGTTAC
AATAGCAGGTAAAAGTGTGATAACCGAAATATTTAATTACTTACTTAATT
GATGAAGCTACTCGCAATATTTAATACAGTACCGTAATCAGGGTTTAGTT
ATTGGATAGGGTTATTTGAAGCGCTTATATGTACTAGGTGTATCAAAACT
ATTTCTCGATTAGGAACTCCGAACTTAATCCAGAACTATGTACTTAATGA
CTCTAAAGTTGTTACGCCTTTTTTATTTGTTTACTTCTTTACATACAGTA
TTAGTTTATTACAGCTCAATACAATCTCCGTTAGCCTTAATGATGACCTC
CAACCAGGGCCTGAAGGCACAGTATGACTTCTTGACCAATCCTTTGTCCA
TATTGTCCCAAATATAATTGACAGAAGCTTTCAGGGCTTTAGTTTTGGGT
TAGTGTTTGTCACAGCCCTTGCTCTCCAAATGCAGACATAAGGCAAAGTC
CAACGGGTTCACGTCTGGTGAGTATGGTGGCCACATTGTCTTATCCTAAA
AAGACTTGTTCTTCTGAAGAAAGGGCTGGGTCACTTTGGTGGTAAGTGCG
TACGCTACATCTTGTTGGACATAACCAATTAACGCATACCGCTTAACATG
CATACAACGAGATTACAAGGAATACAAATAACCAAAGTTGGATTTTTTAT
ACATATATGCATTTTCATCTGATATTAATTTGACGAAAATCAAATGTGAT
AATTTGCAATTACTATTGGACAAAATCTATGATCGTGACAAAAAAAAAGA
AGATAGGGAACTTCATTTGGCAAAGTTGAAGGTAGCTGCAGCTACAATTA
AGTTGAATGAAATAAATGGGATATTTACTTCCTTTTTTATCCGGTCATTT
CAATACTATAAAATTTAAATAATCGGAACTCGACCAATATTTATTTAGCA
TGCTTTTTAATTACAAGCTTCTATAATAAGCAATATGCAAAAGTTTTAAG
TCTAGGTATCAAGTCAGATACTAACAACACTATACAAAATTATACAATTC
CATTATATGAATATATAGGCAAAATATGAACAAACTCATCAACAACTCAA
AAAAATGTATTAACTCAATTTATATTTTTTTATAATTTATTATATTAATA
TAAAAACCGCGATATCAAATAATTCCAAACACCGCATTATGCAAAATCTG
CGTTATTTGAAACCACTTTATGCTGGGACCCTCCGTATAAATAAATTTTA
AAAAAAACGTATTATATAAAAGTAACTACCAGAGGGTGCCGGGGTTGAAG
TGCTGAATAGAGAGGATTAAAAACAAAAATTGAAGGTCAATCATAGAAGA
AAAGAGACAGAGAGAAGGGATGGAGCATAAGACAAAGGGAGAAGAGGAGA
AGGGAAAGACTGAGAGAAGGAGATAGATATAGAAAAGTTTCTGACCTCAA
CGTGACGATAGGTACACTCGTAAATAAAAGATAGTCGCATCTATATAGCA
TCTGTTGATAGTTACTCACCAAGTTACTAAATGATCCATTAAAATCTGAA
CACATGTGTGTCTGAGCTCTCTTAATCATGAATGTAGTTGCATTTATTAG
TAAATATGGCTTYCRGGCGRCGGSAGAASCCCCCGACACACGCTGCAGTT
GTAGTCTTCTTTCATGGCGTCCAAGTTCTAGCATACAGTGGCTTCGGCGT
TTAGATCAAAGACACTGCAGGCCTTCTCCTTAACATGCATCCAAAACGTG
TAGTCAAGGGATTGGTATCAGGGCTGTAGCGGGGGAGGGTGGCAAAAGTG
TCAAAAAAGAGCGCAAAAGAATAACTAAAGAGAGTTTTTCGACGGAGGAG
ATGGGTTTCTTTCATTGTTGGTGTCAAAAGTGGCGTCTCCAACCACACAA
GGCTCTTTCCGCCCACTTTTTTGACAGCTCTTTGGTCAGTCTGGTTCTTT
TAGTCTCTGTTTATTTGTCTCAAATCAATACAATCTCAAATCTCGAAAAG
TTTTTCAAATATCTAAAGAAAATGTTTTCTCTGCGAAATACACTTCTCAA
ATAGATGATTTAATTATTGTTACTATTGAAATAATATGTTTTTGAAAGAT
TTATCAAATAATAAACACCAATGATTTAAGAACATCTAATGTTTAGAGTA
TTAAATACTGTTTTAAATAATTAATTATTATCAAATGGGTTTGATTTTCA
TGTGCATTTACTTATATACAAAATAATAATCACATCACACTCTAACTCAA
AATTAATGAACCTTTGTCTTCTATATTATTATATTTTCAGAGGGTCCTAC
AAATGCCAAAACGCATACTCAAATTATTGTGTTACAGATTATTCTATGGA
AGAACCCATCAAAGACGTATGTCCACCATATTTTGAGTAAAGGCAACATA
TCCAGTACCTACATGGCCGTCGCTAGGGCTTTTCTAGAGGGGATGTTAGA
TATTTTTTCCTTCAAATCGACTTATTTATCAGATAAGAAAAAACAAGAGT
GTTTAAAAAAAAAAAATTAGTAACACTTATGAATTAGATTCCATTTTATT
TTTAGAAAATTATGCTTTATTTTATTTTTAAAATGACCTTTTCTAATAAA
TTGTGTACATATTTATTTTTATTTATAAAATAGTCTAATCTATAAAATAA
TGGTTAATTATATTTTTCCATTTTTATGTTATAAGACCATTTTTTTCGAC
TCAAATATGAATGACATTTTTTAAGGATATATTTTTCATTTTTTACAATA
ATTACATTAAAAATCCTAATTTTCTGAATAAGGTCCTTGTTTTTGAGTCA
TATAATCCATGGAGGCGACGGCCTTGAGTACATAATATAAATAATAAACA
TGCAATTTGATAATTATGTGTCCATTTCAGCTGTGTAAATCGTGAATTCA
AGAATGGAAGGGCAAAAGTGTGCATTCCACGTATGTTTTCTGGAGGTTAT
GGAGGATGTATTAATGGTTTTAGTTGTGGATTCTTCCTTTTATCTCAGAC
TTGGGCCACATGTGTAAATGGTGATTGTGATGGATTCATTCGAAAAAGAC
AGTAA
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