EMLSAT00000003750, EMLSAT00000003750-699597 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003750
Unique NameEMLSAT00000003750-699597
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2015supercontigLSalAtl2s2015:18932..23770 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003750 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003750EMLSAG00000003750-686516Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000016343EMLSAE00000016343-725271Lepeophtheirus salmonisexon
EMLSAE00000016344EMLSAE00000016344-725272Lepeophtheirus salmonisexon
EMLSAE00000016345EMLSAE00000016345-725273Lepeophtheirus salmonisexon
EMLSAE00000016346EMLSAE00000016346-725274Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769433auto769433Lepeophtheirus salmonispolypeptide
EMLSAP00000003750EMLSAP00000003750Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003750

>EMLSAP00000003750 ID=EMLSAP00000003750|Name=EMLSAP00000003750|organism=Lepeophtheirus salmonis|type=polypeptide|length=655bp
MKMSGNSVKAGEGSAPQITYSQQTGFPTIXTTLGQGHQGIMSTHQGQFQV
ISSPPYGTSGATQNAASATTQYIPQFATYNQQGQLVISPSNFPASAYGQH
QIFLTAAPGMQQAQQTQQQAVQQQQVQQQQAAQHQQQQSNHQGGSAKGLL
TTTQGNKQSATLVPISQHQGYTLTHNGLVQSNSPGQQTYMFANTSPLMTA
SQPGLFTSLSSNEAKNDSSKQGQSGLAQQNTAGATTAQAHQGSFIMHNGI
AYMNPQHQQAILSSNGQIILRAPTSHETTQQPIMFSPSALTQQSHIQSPG
ATNQQQGQQQAGQQLSLAPPTLQPMSLSATNTAGTIRHVTTNSNNVSTQS
GAPPGKTAISRALPTILPTTNVRPTYTLPQTPVAQSSLQVNQQQQSSPKS
KNKFSPRGGMGSSAGRQQPGKVLSTSSTASKSKTSSGNNNSLIKAKPPTS
TPPPVTSVLNTSTTNGVTESGSVNNGTSGGRXTPKXFVKPNVLTHVIDGH
VIQESSQPFPLEAGDDKAQNPGGVPKKESLTEESFSHKHNSSSNSISSPA
TTGTCVVSLSVSSGSSSTPIMTTTTATTTSTKSNTSSTNSSVTTGXTTHA
EKKRGPGRPSGSTRQNIDNQRNPGSGNNQSSKGNNHHIKDGSGPPSEKRR
KLTED
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mRNA from alignment at LSalAtl2s2015:18932..23770+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003750-699597 ID=EMLSAT00000003750-699597|Name=EMLSAT00000003750|organism=Lepeophtheirus salmonis|type=mRNA|length=4839bp|location=Sequence derived from alignment at LSalAtl2s2015:18932..23770+ (Lepeophtheirus salmonis)
ATGAAAATGAGTGGAAATAGTGTCAAGGCTGGGGAAGGTTCTGCACCTCA
GATCACATATTCTCAACAAACAGGGTTTCCTACGATCGNGACAACTCTTG
GACAGGGACATCAAGGGATCATGTCCACTCATCAAGGACAATTCCAAGTG
ATTTCCTCTCCTCCTTATGGGACCTCAGGAGCCACTCAGAATGCTGCATC
TGCAACCACACAATACATTCCTCAATTTGCGACTTATAATCAACAAGGCC
AACTCGTCATTTCTCCCTCCAACTTCCCTGCTTCAGCCTATGGGCAGCAT
CAAATCTTTCTCACAGCTGCGCCCGGAATGCAACAGGCTCAGCAAACYCA
GCAGCAAGCAGTACAACAACAACAGGTTCAACAGCAGCAGGCGGCACAAC
ATCAGCAACAACAGTCTAATCATCAGGGAGGCTCTGCCAAAGGACTTCTT
ACGACCACTCAGGGGAATAAACAGTCTGCTACACTTGTTCCAATCAGTCA
ACATCAGGGCTATACTCTCACTCACAATGGACTTGTTCAGAGTAACAGTC
CGGGGCAGCAAACTTACATGTTTGCTAATACCTCTCCCCTCATGACGGCA
TCACAACCCGGCCTATTCACCTCTCTATCATCGAATGAGGCAAAGAATGA
TTCCTCCAAACAGGGGCAATCCGGTCTAGCCCAACAAAACACTGCTGGGG
CAACTACAGCACAAGCTCATCAGGGATCCTTCATTATGCATAATGGAATT
GCCTACATGAATCCTCAGCATCAACAGGCAATCCTCTCATCCAATGGACA
AATCATTCTGCGAGCTCCAACGTCTCATGAAACGACTCAGCAACCAATCA
TGTTCTCTCCCAGTGCTCTTACACAGCAGAGTCATATCCAGAGTCCTGGT
GCCACCAATCAGCAGCAAGGACAGCAACAAGCTGGACAACAACTTAGTCT
AGCKCCTCCAACATTGCAGCCTATGTCACTGAGTGCAACCAACACTGCAG
GAACTATTCGTCATGTAACGACTAATTCTAACAATGTGTCTACACAGTCT
GGAGCKCCTCCCGGTAAAACTGCCATCTCTCGTGCTCTCCCTACCATTCT
TCCCACCACGAATGTTCGACCCACTTACACTCTTCCTCAGACCCCTGTTG
CACAGTCCTCTCTTCAAGTAAATCAACAGCAACAATCGAGCCCCAAGAGC
AAGAATAAGTTTAGTCCTCGAGGTGGTATGGGTTCTAGTGCTGGACGTCA
GCAGCCAGGAAAGGTCAARTCATCAGTYGGKGGASCRKCAGCCAATTCCA
TTCTGAAGCCCTCTATGGTTCAACAGAGAGCTACACCTCCTGGAACCATT
ATGAGTTCCTCTCCAAGTCCTCTAGCCATGGGCCCACCAATTTTNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNCATCAACCAAGGTTCTTTCCACTTCATCCACCGCTTCCA
AAAGCAAAACTTCATCGGGGAACAATAACAGCCTCATCAAGGCTAAACCT
CCCACCTCTACTCCACCTCCAGTTACTTCTGTTTTAAACACATCAACAAC
CAATGGAGTGACTGAAAGTGGATCCGTCAACAATGGAACTAGTGGCGGSC
GKGRTACTCCCAAANCCTTTGTCAAACCCAATGTTTTAACGCATGTCATT
GATGGTCATGTTATCCAAGAGTCCTCTCAACCCTTTCCTTTGGAGGCCGG
AGATGATAAAGGTAGGTCATGAAGGAAATATTCTTTTAATRCATAACAAC
GGTGTGTTCAGTTTGTATTGATAATAGCATTAGGCAGCGCCCCTTCTCTC
CTAAGTTGGGGTGTTTTGGGAATTCCTGGGCTCTGTTTCCCTAGCAGTAT
TTATTATACTATATAACCAAATATGGTTACTCGTTCAAAGTACGTTCAAA
GTACTCAAGGTTGTGTGATATCTCCCTTTTCTTCAAGAAAGGGAAAGTGA
ACCAACAAATGTTGTATATTTCTATTTGAAAAAGAGAGGGAGAAGAAAAA
AGAAGTCTCTTTTACAGACTTCTTTTTTCGCCCTATTCAATGATAAATTA
CATATCTTTTTATTTTTCGTTGGATGAGAAGAAGTCCTTTTATATTTAAT
TATATGTATATATTTGATGGAAAGAAGGAAACATCCGGTGGTCGTATACA
TAATAGTATTATTAATATAAGGGAGTCAGAATAATTATGACATTTGTAGG
GGAAGGAGAGAGAAAAGGTCGTACAGCAGCAGCTGAGCTTCTTTTCTTTC
TAGCTTTTTTTGTATTAAATCCTCCTCATCAAATAGTTAGTTGTACAGAC
ACTCATCAAATTAAATATAAGGAGGAAGCATCCTCTCATTGGATTTTACA
GAATAATTTGTATGTTTAGTACCCTACGCGCTCACTTACTCCTTAAACGC
GCCTGTAATTGAGAGAAGCAGAGAAGAATTCTCTATAATCTGGCAGTCAG
CGCAACCATATAAACTCCTCCTGCTTTGTTCTGCTCTCCTAATATTTTAT
TCTGTATTTTACTTCTTCAAGCCTCACTAAGTGAAGTAAGAATAAATATT
CTTCTCTCATTGGAAAGCGCTTCTTCTACAAGAAGAATACAATAATAGTT
CCCTCCCACTTTTCAAAATTTATTATTATCATTATGTTGCTCCTTCCATA
TATGACAAGTCTGTTTATGTAGGATGAAAATACGCCTTGAGGGCTTATAG
AATAGACTCTACGGGGCTGGAGGCGAATGTGTCTACGGAGACACACTCTA
TGTGGAAAAATTTATAAATAAAATGTGGCCCTTCATGTAGAAAGAGATAG
AGTGCGAGGATCAAAGTTTCGAGCTTGTGTGGGACGTCCTCGACGTGGTA
CTTTACACATAAATTAGGATGGAGTGTGTTTCTAATAAGAGGGAGGCATA
ATATTGATTGATAAATTTAATGATAATGGAAAGGAAAGTTTGTCAAAAAC
TGTTTTTCTTTTCCCTTTTCATACCATAAGAAGTAACTAGGTGGAGTGAT
GATGAAAAATGTAATGTACTACACCTCATGTTTGACGGAGATCGAATTAA
ACCTCTTATTTATTTATTTATAATACTAAGTGCTTTAAGGAAATGAAAAA
ATCTCTTCCATTTCGTCATTCCTTCCTCTATAAGTTCAGTTTTTTCCTCT
CCTTCTTGCCTGCATTAATRAAATTCCTTTTACTAGCTACTACTAAAAGA
GGGGAACCGTCCCTTACAAATCTTAATACAAACACAAACCATTTCCAGAT
GTTTTCCTTCACAGAAAAAAAAAAGTTTTTTTCCTAAACAAATATATGTA
CATAGATAATGGAAAGAAAGACTGAATAATTTTAACATATTCCTTTTTTT
TATATCTTCCAGCTCAAAATCCCGGAGGTGTACCCAAAAAGGAGTCTTTG
ACGGAAGAGTCCTTCTCCCACAAACATAACTCTTCTTCAAACAGTATTAG
CTCCCCCGCTACCACTGGCACATGCGTTGTTTCTCTGAGTGTCTCTTCTG
GGAGCAGTAGTACTCCTATTATGACCACCACCACCGCCACCACCACATCT
ACAAAATCAAATACTTCCTCGACCAACTCCTCAGTGACTACAGGAMCCAC
CACGCATGCCGAGAAAAAGCGTGGTCCTGGTCGACCGTCCGGTAGTACGC
GTCAAAACATTGACAATCAACGCAACCCTGGCTCTGGGAACAATCAGAGT
AGTAAAGGTATGTTGAAATATAGTTATTGTATCTTGAATCATTCTTAATC
ATGCATTGATTTGTTTTGTAGGAAATAATCACCACATCAAAGATGGGAGT
GGTCCACCCAGTGAAAAACGCAGAAAACTAACGGAGGAT
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