EMLSAT00000003801, EMLSAT00000003801-699648 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003801
Unique NameEMLSAT00000003801-699648
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s206supercontigLSalAtl2s206:188864..197335 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003801 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003801EMLSAG00000003801-686567Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000016540EMLSAE00000016540-725468Lepeophtheirus salmonisexon
EMLSAE00000016541EMLSAE00000016541-725469Lepeophtheirus salmonisexon
EMLSAE00000016542EMLSAE00000016542-725470Lepeophtheirus salmonisexon
EMLSAE00000016543EMLSAE00000016543-725471Lepeophtheirus salmonisexon
EMLSAE00000016544EMLSAE00000016544-725472Lepeophtheirus salmonisexon
EMLSAE00000016545EMLSAE00000016545-725473Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774196auto774196Lepeophtheirus salmonispolypeptide
EMLSAP00000003801EMLSAP00000003801Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003801

>EMLSAP00000003801 ID=EMLSAP00000003801|Name=EMLSAP00000003801|organism=Lepeophtheirus salmonis|type=polypeptide|length=333bp
MLDVFRGVKTLLSVKHLKIDSSIFRLHYSLTVAFLLSFSLIVTTRQYVGN
PIDCVHTKDIPEDVLNTYCWIHSTYTIPSAFWKRIGIDVAHPGIDKTIDP
EERRYVKYYQWVCFCLFFQAIFFYVPRWLWKNWEGGKITSLKMDLDSGII
NESEKRQKKKLLLDYLYSNLKNHNFYAYRYFFCEFLGLINIMGQMLLMDK
FFDGTFLTFGIEVRTSGEVEKHDAMCILPLNIVNEKIYIFLWFWMLIMFV
LTFMVLVYRLCIIISPRMRAYLLYIRFRLVKKECINIIIKKTKMGDWFLL
YMLGQNIDSIIFKEVMHELARKLGYHNKDVYDT
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mRNA from alignment at LSalAtl2s206:188864..197335+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003801-699648 ID=EMLSAT00000003801-699648|Name=EMLSAT00000003801|organism=Lepeophtheirus salmonis|type=mRNA|length=8472bp|location=Sequence derived from alignment at LSalAtl2s206:188864..197335+ (Lepeophtheirus salmonis)
GGGATGGGTCGTTCTCTAAAAAGAAAAAAGAAAAAAAAAATGTCCCAATT ACCCAATAAGAAGGAGAATATGAAACATACATGAGCGTGAAAGGACAGGC GTACAAAAAACAAAATTTAGTTATATTGTACGTATGAATGTATTGACAAC TTCTTGCATCTTTTAATATCATAGAAAATTGTGTTTGTGTTTTTAAAAAA ATCCATCCTTCTACTGACATTAACGAAAGAAAAAGGAAGATAGAAATAAA AAGAAGAAATTAAAAATGTGATTCTTTTAAAAAAAATTATCAAGATATTT TTTTTATAACATCCAAATATGAGAGTATCGTTCCATGGTATGTGTCCATG ATTCATCTTAATCTGTTTTTAGTGAAGGTCAGTACACCTAACCTCTTTTT ATCACTCCCTTCTCCAATGTATTCCCCCTATATATCCACTTAGGAACACA CACAGCAGCTAACAAAATGAAAGTCCTTTTTTGCCGGAACATGCAGATAT ATATATGTTTAATATTTTTGCAATAAATTAAAAATTATTTAAGGCTCTCT ATATTATGGATGTGTGTATTTGGAGGTTTTGTTTGAGATTTTTAATCCTG TTTTGTAGAAATCTTTTACAATAATTCAGTGTGTGTTTCTTTTGGCAATT TGCCGAATTACATACAAAATACAAAAATATATTAGTTCATCTAACTTTTT AAACTAGATTTTTGTTACATCTGTGGAGGAAAAACGTTTTGGAGAGGTTA AAAAACATTATATGTACTTATATATATATATAAGAAAAAGGAACAAACAT TTATCTAATTTTTTTGCTATTTTTTAGATTACTTTTTTGTTATATTGTTG TTGTTTTTATCTATCTTTTTTTGAGTAGGGCTTCATTGTTGCCCGTATAT TGGATAAACTTACATATAGGTGTTATATTAATGTATAGATAGATCTCGTT TCGGGCATATATTATGCATGCATAAAAATCAAATTTTATAAGAAGAGATC ATGTGTTTAGGAGAGTTAATACAAAAGAATCTGAAACAAAACAAATCATG TAAATGATAAATACACAATTTATTTTTTTACAGAATGTCTTACGAAGCTT CATATTTCATTCCATTTTTTGGACAATTTTTGGCCTTGTATTCAAATTTC TCGTATAAGTCAAGAAGCCTAAGAATTTTAATTATAATTTAAAACTTTTA TTTGNATTGATGATACTTAATTTGTCCTCAATATAATATATTTCGAATCA AATATAACTGTACCAATGAATTTTTGTTAATTAAGTAGGATTTGCGGGAC CTCTAAAAGAATAATCAGAATAATTTGTTCCTCGAAATTGACGAGCATTC GTTAAAGAATTAAAATATGAAAAATCCTTTTAGTTTGCTTTTGTGTTTGA CGACATCATAGTTGTCTTTTAGGATCAAAGGAATTTTTTTTTTGAAAAAA GAACCCTTATTTAAATTAGGGAATCAAAAAAAATCCTATTATTTTCCTCT TCTCTAATTATTATCCTAATTTTCCATTCATTCCAGATGACTGTCAAAAA GGAGACCATCAGTAGTTCTGACTATTATAATGTAAAAAACAGGACACAAA TCTCTCCTATCAAATACAACAATACGAAACAAGGGCTCAGAAAATGAGAC ACTTACTTAGTTGGTATATATACTTATGTAATTATTAGGGGGAACAAAAC TTCTTCTTGGAGTACACCCTTTCTCCTCTTTTAATACCACTGCAGAATAT ATCAAAGTCTACCTACATATTTATGATCATTGAAGAATACTTTTAGTTAA AAAAACTTTAAAAATGTTGGATGTGTTCAGAGGAGTAAAGACTTTACTTA GTGTTAAGCATTTAAAAATCGACTCATCAATTTTTCGCCTTCATTACTCA CTCACAGTGGCCTTTTTACTCTCATTTTCTCTCATTGTGACGACAAGACA GTATGTTGGTAATCCTATAGACTGTGTTCATACCAAAGATATTCCTGAAG ATGTGCTCAATACTTATTGCTGGATTCATTCCACTTATACCATCCCAAGT GCATTTTGGAAACGTATAGGGATCGATGTTGCACATCCGGGGATTGACAA AACCATCGATCCTGAAGAGAGGAGATATGTCAAGTATTATCAATGGGTCT GCTTTTGTCTCTTTTTCCAAGTAAGGGCGGGAAGTTGTGCATCCTTTTTA AGTGTAGGGTTCTAATTTTTTGGAATTATCATATTTATCAAAAAATTAAA AAAAACACCAATTATTAAATCAAAATATATGTAATTGTACATAGATATAG CCCTTAAAAATATGTCCAAAAATTACAACACAATGCTCAAACAGACGGGA ACGAGCCATTATTTTTGTGCACATAATCATTATAAATTTGTCCTTCCAGG CTATCTTCTTTTATGTGCCCAGGTGGCTTTGGAAGAATTGGGAAGGAGGG AAAATCACTTCTCTCAAGATGGATCTAGACTCTGGAATTATCAATGAGTC AGAAAAGAGACAAGTAAGTAATATTTTTCTAGTATAGGTATTTAAAKGAG KCCATCGGGGGGGGGGGGGAAAGTTCAAATCCCATCTCTNATACAAAAAA TTAATCTGGTTRTTNTTTGATTTTTTTTTCTCCCAAAATTTCAAACAGTC ATTCTCTAAAAAAATGGTTCTTTTCAAACAAATACGAAGAAATATACCGT TTTAGAAAAATAAATTAATGTTTTGATGTTGGTCAAAGAATTTAAAGTTG TAAAGCTCACAATTTGATGAAACAAGTAGAATTTTGACCTAAAAAAATAG TCAATCGCAGTCAAAAACGCTTCTCTAAAAAAGTTTACCTCTTACAATAA TACTTTATTTATAATAAAAAATCATATAAAAGGACAATTATATACAAACT TTAAAATATTTTTGATCCATCTAAAGTAGTTATTTATAATAAATAGCTCT ATTTAGACCCTAACCGACTTTAGGGTGAAATTGACAATTCCAAAGACTGT GTGCAGCCTGAAAACATTGACCAAGATTACTCAAATTTAATATTTTTTCT ATTTTTTCCACCTGACATATGGAAAAAATTAATCAAGTAAGAACCTCTGT AATGTCCATAGTTTTTCCGCATCCTCATACAAACAAAGGCATGGCTCAAC ACTTACMCAGTACGTGCCCTTCTAACCTTTTGGACATCGGCTGCTGGYAG ACTTTGATGGACTGAAGGGATACTAATATATTTTCAAGTTGACTCATTTA AATTATGTATCCACTACTGGTTTCTATTTAAATGTATGTTTTTCTTTCTA ATAGAAAAAGAAACTTTTGCTCGACTACCTTTATTCCAATCTGAAGAATC ACAACTTTTATGCCTACAGGTAAGACAATTAATTATAAATACATTCACAA TAAGTCTTCATTACTGCTACCATATTGTAAATCTTATACACTACGAAAAA ATTCCTTAGAGAGTTGGAAAAATTACTATGACAACTCTAACTGATTAAAA TTAATCATCCAACACCATTAGCACATTCCCCTATTTTTTTATTTTTCGTG TTTTGTTTGCGTACATCATTCTATTTGTTCTAGTAAGGATGAACACAAAC ATTCTTCAATATTTGTTATTAATATTTCTATGGTCATTCTTATGCAAATA CTCACATTGCTGTTCAAGAACACAATTTGATACTGTTTATGTAATTACAT AGGTGTTATATTAATATCCCCATTCCAAAGATATTTTCTTTGGGGGATAA TCAAAAAGTTGATGTTAGTAAAGTTAGCCTGTTAGGCCTTTTTTGGCGTG GTGCAGGATATTTTCATTTGAAAAGAAAAGCGATTCGCTATTTCTAAGCC TCACGAACCGTTCCAAATATGATGCTATAAGGCTAACATTGTATATTTAA AAGTATTCAGTTAATCAGTTCAAAATATTGTGTACCTTGTTTTAAATAAG TTAAGGGGTCTACAATTCCTGTTTAACTATGTTATCATACATAACATAGC GAAATATAACTCCTAGTTGAACAGCAAGAAGAAACATAACCTAATATTAC GAATCAAATACTGGACACAGATAAACTGATACAAAGCGTCCTTCTTTTTA ATAGCATATAAATTTGATTGTAATTATCACATTATATTAAGATTGTGTCG TATATTAGCATTCTTGAGAGATTAATGGTTGAAGAAATTAGTTGGAGTGG ATAAATTGACATGTATTTAAAACAGGATGATTATTTTATTTGTCTAGTTT TTCAATGAGTAGAGAACAACATCTTAAATGTTGATATGGTTCAAAACTAT TTGAGGATCATTATGTACTAAATACATTTTTGGTTCAATAACAGTTTGTT TCAATTAAACAAAAACCTTCATTTTTGGAATATTTGATTGGAAGCCTTGT ACTAGATATATATTTTTTAATTTTAAGAATATGTACTTAAAAGAAAATGA TTGATATTTTTTTTTTTTTTAAATCGATGATACAAAATAAAATAAACAAA AATATTTAACTAAAAGAAAACGCCATTACTTATAAAATGGTCATTTGAAA GAATGAAATTTAAATTTTTTTTTAAATTATAATTCTTTTTTTTTAAATAC TACATTTAAAGAAAGAAGTAATATGCACAGTTCCATTTGCACGAGGCCAC CTTTCACGCTATAAACAGCTCTGATTATACCTCAAGTTGGCACAAAATTG AACACATTAAAATTAATATTAAAGCTGCAGTACAATTTATTTTGCTATGA CGTTGATGTGCCAAGTTGGCCATTGTTTTGAACTTTGCAAATAAAATAAT TGACGTATCCTGTGTCACCTTAAATGAGTTTTGTGTCAACTAACCCCTTT TTTTTTACTACAAAAAACATAAGAAGTGATGTTTACTTGAATATTTATGG GCATTATATTAAAGTTAATGTTTCTTACATACACATCATATGTGTACATA TTTATCCGTTTCTTATCATCAAACACATGATGTAAGTAAATTGTTTGGTG GTTGTTTTGGACAATTACTTTATTTTTATTTTTTACATTCTATAGTGAGA CTACAACATCAAAACACCTTATATATACATTTTGTAATAGGCACTACACA AAATATTGTTAAGAGTAGACTAAGAATATAAAACAAAACTTTTTTATGGA TGATAATATTTGAATTTATTGTTAGTATTGGACAATGATAAAGCACTTTA TAACTCCCCTAAAAAAAACACAACACATAAAGAGAAAGTCATTATTGGCA TGTAGTATTTGTATTTATGTACTTAGTGATATCAAAAGAACTCTATTTAA TTCTTCTTTTTCCATTCTATGAATAATCCTATAGATATTTCTTCTGTGAA TTCCTGGGGTTGATCAACATAATGGGACAAATGTTGCTAATGGACAAGTT TTTTGATGGCACTTTTCTGACTTTTGGAATTGAAGTAAGTCAAATCGTAC ATAATGTAGTCCTTGCTGATTCGCGGATTTTTGTGTAGTTAATATAAACT TAATAATAGTTAATAATAACATTAAAAAATCAAAGGGATTTCGATTGGTA GTTCGACATAGCAAGGCTATAATATATTAAAAACTTCAGTCTGTTGCTAT AAATGGAGGCTATGTTAATGGATATAAAAGTTTCAAAGTCGGCTAATATA AAGAAGATTATTAACTAAGCTTTTGTCACAGAGTAAATCAGAGTTGTATA CAACTTCCCTGGTAGGAATTGCTGATTGTCACATCAATAAAGGTTAATAA ACTGTTTATGCAATAGAAAAAATAAATATAATGTCATATACCCTTTGTGT CAGCTGAAGACTTTGCATAATCATTAACGCATTTTTTAGCGTAAATGTGT AATGGATAATACCAACAACTATAAAAATTACTATAAAGTACTTTTATAAA CGTCAATATCTATAGTACTTTTTTGTGATATTTATCTTTTCAATGTATAA ACTTATCCTTATGACGAACAAAATCAACAGATAAAGCATATAGAGTGATT AATTATTGAATTTCTAGATATACATACGAGTACACTATTACTCATATCCA TGTATATAAGATCTAACAGATTAATCCGGCCAAATTTTGACAATATCAAT AACAAGAGAAACATGGTTAAGGTCTACTGCCTTTATTTAACCATATAGTT GGAGAAGTTAGATTTTATTCGATTCGGTCAATGTCAACCGCCACTACGAC CTTCATCCTATACCTAAAGGTAGTACAGGCGTTTGTGACATAGCAGGATC TACCTTCCTGACTTCACGCTCGATGCTGGCCTTCACACAAGGGTAGGACT TAGACTTGGCTTCTAATTCCTAAAAGAGGTAGAAGTGAAAGGGATTCGCG TCGAGGGAGGTAGTGGCCAGTTCTTGACGTCTAAAAAACCTAAGACATTA GATTGGAGCCAATATATGACAATTTTGGCGCCATTCAGAGTCCTGTAGGA ACAAATACGGGAGCTGATTACTACCTTGTTCATCCAGGGAATGACGATCT TCTCGAGAAAATCCCCCATGGTCAACTCCAGACCTAAAACAGCAACTTTA ACTCAAGGGTATATGTTTATATTGCCTTGACGTAGTTTTTGTATATGTTG GGGTCCTATTCTTTGACATCKCCCGACTCATTCAGGGGGTTAAAACATTG TAGACGGTCTGGAATACCCGGTTTAGTTTATGAAAGCCCTGGCTTTGTTT CTTGCTCAAGGTGATTCAGTAATAGTCACTCTTCCATGGTTAATGGTGAC ATATTTGTAACAAAAATCAAAAGTACAAAATAGTTGCTAAATCTCTTGAT CCCTCAWATATGGCCATTAACTAACCGCAATACGGTCAAACATTGTTCGG ATTTATCTGTTAGACCCTGCATAAAATACATTTATGTGGGGTATTTCTAT GAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAATAG TCACTCTTCCATGGTTAATGGTGACATATTTGTAACAAAAATCAAAAGTA CAAAATAGTTGCTAAATCTCTTGATCCCTCATATATGGCCATTAACTAAC CGCAATACGGTCAAACATTGTTCGGATTTATCTGTTAGACCCTGCATAAA ATACATTTATGTGGGGTATTTCTATGAGGGTATCAGTTGTTAGTAGTAGG CAAGGGTACATCTACATATATTGGACGCGAATAATGGGAGCTCACTATAT ATATATATATTTAAAAAAAACAAGCCAAACATCATCTTTTTTTGTTTTGT AATCATAGGTAATATCATTTGCTGAAAGAGACCAAGAGGACCGTATCGAT CCTATGGTGTATATATTTCCAAGAATGACGAAATGTACCTTCCACAAGTT TGGTAAGTGTCTCTTTTTAAAAATGTCCTTAGTTAACACAAAAACAATCG TGAACAAAAATCTTCAAATAAGAATTTTCAAATTTATTTCTTTACATCGT CGACATATTTATTTTATGTTTATTCAATTTCAAGGATGATTTGAGATACT CAACAAAATTATTGACTACAGCCTAGAATTTTCATTTGATTTGACCATAA TATGCCCCTTTCAAATAAAATCAATCAGTTTCAAATTATTTTTTTTGACT ATTGTTACATTAAGTACAATTTGAGGTACCTCCAAAGGATTAATCAGAAT AGATTGATAATAGAAATAGACAGATATTCGAATACTCAATTATGAGAAAA GTAACAGTAGCTGGATTTTGTGATAGGTGATCACAAATGGATATGTAGTT ACATAGTGCTAATACTCCTCTTTGATTGCTTTCAGGAACATCGGGTGAAG TGGAGAAGCACGATGCCATGTGCATCCTTCCATTAAACATTGTCAACGAA AAAATCTACATTTTTCTATGGTTTTGGATGTTAATTATGTTTGTTCTGAC CTTTATGGTTCTGGTGTATAGACTTTGTATCATAATTTCTCCACGTATGA GAGCCTATCTCCTTTACATACGCTTCCGCCTAGTCAAAAAAGAATGTATC AATATAATTATCAAAAAAACAAAAATGGGAGACTGGTTTCTACTCTATAT GTTAGGTCAAAATATAGATTCTATTATTTTTAAAGAAGTGATGCACGAAC TTGCAAGGAAGCTTGGATATCATAACAAGGACGTCTATGATACTTAATAA TTAATTATACACCCTCATTAATTAATCCACGCCTTCCCTACTACATACAT ACCTAGATACATATTATAACAATAATTAATAATTATCTTATACTTTTTTT ACATAAAATACGTCTTATTTAAAATATTTCATATTTAAATTATATGTAAC TATATATAAAAGATGTATGTACAAAACAGTGAGATGAAGAAATTCTTTCA GTTTGATGCATTTTACAAAAAATATTACATACCAATACTTTATATAATAA ATTCTTTTTTTAATATGTATAC
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