EMLSAT00000003804, EMLSAT00000003804-699651 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003804
Unique NameEMLSAT00000003804-699651
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s206supercontigLSalAtl2s206:253247..255056 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003804 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003804EMLSAG00000003804-686570Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000016556EMLSAE00000016556-725484Lepeophtheirus salmonisexon
EMLSAE00000016557EMLSAE00000016557-725485Lepeophtheirus salmonisexon
EMLSAE00000016558EMLSAE00000016558-725486Lepeophtheirus salmonisexon
EMLSAE00000016559EMLSAE00000016559-725487Lepeophtheirus salmonisexon
EMLSAE00000016560EMLSAE00000016560-725488Lepeophtheirus salmonisexon
EMLSAE00000016561EMLSAE00000016561-725489Lepeophtheirus salmonisexon
EMLSAE00000016562EMLSAE00000016562-725490Lepeophtheirus salmonisexon
EMLSAE00000016563EMLSAE00000016563-725491Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775345auto775345Lepeophtheirus salmonispolypeptide
EMLSAP00000003804EMLSAP00000003804Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003804

>EMLSAP00000003804 ID=EMLSAP00000003804|Name=EMLSAP00000003804|organism=Lepeophtheirus salmonis|type=polypeptide|length=455bp
KGLPPDVNRHSVFANDYLDLSDIEIYGFDYDYTLTNYKKSVEIFLYNSAK
KDLIERLKYPKEFENFHYDDKYCIRGLHFDIEHGLLLKVDSFHQIQLGSV
YKGRRQLADEEVLRIYQRRHVPLKMIEERHHRKPRMSQMMDIFAKPFMCL
LADVIHWFSEKGIEYEPYSIHHDVWSSVQTSHPAFHKECVKYPEIYLEEF
PELSSFLENLIDQNKQIFLITNSTFDLVNAGMSFMIGKDWKSLFNLVITK
AKKPQFFRDKSLCFREFDPVKKILLYDKVWKLLPNKVYSGGNLHTIQKMM
KWEGSKVLYFGDHPYSDLEDLTLHHGWRTAAIIRELEDEIDTINKEEFKK
YQNWSITLQSLIENNQMYLSEDCKDVITSWVHELNDITLKMKKMSNPYFG
SIFRTHVSPTAFSRXLFRFADIYTSKLINMSPYSTDHVFYPRRGALPHEF
RHWTG
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mRNA from alignment at LSalAtl2s206:253247..255056-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003804-699651 ID=EMLSAT00000003804-699651|Name=EMLSAT00000003804|organism=Lepeophtheirus salmonis|type=mRNA|length=1810bp|location=Sequence derived from alignment at LSalAtl2s206:253247..255056- (Lepeophtheirus salmonis)
AAGGGACTTCCGCCAGACGTAAATCGCCATAGTGTTTTTGCAAATGATTA TCTGGATCTTAGTGACATAGAAATCTACGGTTTTGACTATGACTATACCT TAACCAACTACAAAAAATCTGTAGAGATTTTTCTCTACAATTCAGCTAAA AAGGATTTAATAGAGCGTTTAAAGGTTTTTCAAATTAATCAAAGTATTAA CTTTAAAAATTTCAATTCGTATCTTTTTTTCTGTATCCAGTATCCAAAGG AGTTTGAAAATTTTCATTATGACGACAAATATTGCATTAGAGGACTTCAT TTTGATATAGAGCATGGGTTGCTACTGAAAGTGGACTCTTTTCATCAAAT ACAACTGGGATCAGTCTACAAGTAAATGAGAAGCATATTATGTTTCATTT TGACTCATTTAATTATTTTTTTTAGGGGACGGAGGCAATTGGCAGATGAG GAAGTATTACGAATCTATCAAAGAAGACATGTTCCCTTAAAAATGATAGA GGAAAGGCATCACAGAAAGCCCCGCATGTCTCAAATGATGGATATTTTTG CAAAGCCTTTCATGTGTCTCTTAGCAGATGTTATTCATTGGTTTAGTGAA AAAGGTATAGAATACGAACCCTACAGTATTCATCATGATGTTTGGGTAAG AAAGAATTACAAAATTAACTTATGAACCTACTTTTTATTGCTCTTTTTCT TCTTTTTTTTAATAGAGCTCGGTCCAAACGTCCCATCCTGCATTTCATAA AGAGTGTGTGAAATATCCTGAAATTTACTTAGAAGAATTCCCAGAGCTTT CTTCCTTTTTAGAAAATTTAATAGATCAGAATAAGCAAATTTTTTTAATT ACAAATAGCACATTTGATCTTGTCAATGCAGGTTTGTTTTTAAGAGTATG CAAAAATATGATTTCATTTTGAAATTTTCTTCCTAAAAAAACAAGGAATG TCCTTTATGATTGGAAAAGATTGGAAAAGCTTGTTTAATTTGGTAATTAC AAAGGCTAAAAAACCACAATTTTTTCGAGACAAGTCACTCTGCTTTAGAG AATTTGATCCTGTAAAGAAAATATTGCTATATGATAAGGTCTGGAAACTA CTCCCAAATAAAGTTTACTCAGGGGTATGTATTTCTTTATCTATACTAAT TACATAGCTATTATAATTACTTAAATAACATAGGGTAATCTGCACACTAT TCAAAAAATGATGAAATGGGAAGGTTCTAAGGTTTTATATTTTGGGGATC ATCCATATTCAGATCTTGAGGATCTGACTTTACACCATGGATGGAGAACT GGTAAAATATTAATATACATATTTCATGAGAGAAAAGTCACTAAAAATTA CTTTTTTATTATTGTCAGCTGCAATTATTCGAGAATTGGAAGATGAAATC GATACAATTAATAAGGAGGAATTCAAAAAGTATCAGAATTGGTCTATTAC TCTACAGAGCTTGATTGAAAACAATCAAATGTACCTCTCTGAGGATTGTA AAGATGTTATAACGTCATGGGTTCATGAGTTGAACGATATCACGTGAGTT AGTTCAATACATTGTAGATATCCACATACTTTATTATTAAATGAATTTCA TGTAGGTTAAAAATGAAAAAAATGTCCAATCCTTATTTCGGTTCAATTTT TCGGACRCACGTGAGTCCAACAGCCTTTTCTCGTAASTTATTTCGATTTG CGGACATATATACTTCTAAACTGATTAATATGAGCCCATACTCTACTGAT CACGTATTTTATCCTCGTCGAGGAGCTCTACCTCATGAGTTTCGACATTG GACTGGATAG
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