EMLSAT00000003813, EMLSAT00000003813-699660 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003813
Unique NameEMLSAT00000003813-699660
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s206supercontigLSalAtl2s206:356922..359066 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003813 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003813EMLSAG00000003813-686579Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000016581EMLSAE00000016581-725509Lepeophtheirus salmonisexon
EMLSAE00000016582EMLSAE00000016582-725510Lepeophtheirus salmonisexon
EMLSAE00000016583EMLSAE00000016583-725511Lepeophtheirus salmonisexon
EMLSAE00000016584EMLSAE00000016584-725512Lepeophtheirus salmonisexon
EMLSAE00000016585EMLSAE00000016585-725513Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776819auto776819Lepeophtheirus salmonispolypeptide
EMLSAP00000003813EMLSAP00000003813Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003813

>EMLSAP00000003813 ID=EMLSAP00000003813|Name=EMLSAP00000003813|organism=Lepeophtheirus salmonis|type=polypeptide|length=426bp
MDEEDQLLLKWDDHHKSFFSLASELXDREELIDVTLITGDSSFPAHKLIL
SICSPYFRSLFVRNPCSHPMVVLKDVEAKYLRLXLIYMYEGQVACPSAEL
SGLLATAKSLQIRGLLELEKKRRRAXSSSDDXSSSXASGXLHPLHTHNNN
NNILVEEERLMKKEQSSPLDMHVDERASPSLQTYVKPNQDSSLMNNXSHN
THGGXHAPSNGLNYTTKGASSGQPPSSNMLPPNALDPSDPMASMNALLAX
AASXXRKGHSXLLVQVQQNHQIKGGDKSNSKLDPNNXTSASNEINQAAAM
ANLQLYYYMQKVAGIGNGGPPSSTPSSSSPKERKECHVCGKTLYDRSTWN
RHMRIHTGEKPYPCRFCGRRFRTNYNKLGHEKKCPDRHNGEGTDGGGREK
GLAPSANKNTNNTSSSNNNNTSVTIS
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mRNA from alignment at LSalAtl2s206:356922..359066+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003813-699660 ID=EMLSAT00000003813-699660|Name=EMLSAT00000003813|organism=Lepeophtheirus salmonis|type=mRNA|length=2145bp|location=Sequence derived from alignment at LSalAtl2s206:356922..359066+ (Lepeophtheirus salmonis)
ATGGATGAAGAGGATCAGCTCCTTCTCAAGTGGGATGATCACCACAAGTC CTTTTTCTCTCTTGCTTCCGAGCTTKTGGACCGTGAGGAGCTCATCGATG TGACCCTCATCACGGGCGATTCCTCCTTCCCGGCACACAAACTCATTTTG TCCATTTGCTCTCCCTACTTCCGCTCCTTGTTCGTGCGCAACCCTTGCTC CCACCCCATGGTCGTTCTCAAGGACGTGGAGGCAAAGTATTTGCGGCTCC RTCTCATCTACATGTATGAGGGCCAAGTGGCCTGTCCCTCGGCAGAGCTG AGCGGTCTCTTGGCAACGGCCAAAAGTCTTCAGATTCGAGGKCTCCTTGA GCTGGAAAAGAAGAGGCGGAGAGCCKCCTCCTCCTCGGACGATCKCTCCT CCTCARCCGCCTCAGGGKCTCTCCACCCTCTCCACACCCACAACAACAAC AACAACATCCTCGTGGAAGAAGAAAGGCTGATGAAGAAGGAGCAGTCCTC TCCCCTGGATGTAAGTTTGTCCATTCTCTTGGCACTTGGCGGAGCCCCTG ACTTAGTTCTCTCCTTTCTTTAGATGCATGTAGACGAACGCGCGTCGCCT TCGCTCCAGACCTACGTGAAACCCAATCAGGATTCCTCCCTCATGAATAA CAKCAGTCATAACACTCATGGCGGCRCCCATGCCCCTTCCAATGGGCTCA ACTACACCACTAAAGGAGCAAGCTCTGGGCAGCCACCCTCATCCAACATG CTGCCTCCTAATGCATTAGATCCCTCTGATCCCATGGCATCTATGAATGC ACTATTGGCAGSAGCGGCCTCTCKGGMAAGGAAAGGGCATTCCCRTCTGC TTGTAGTTCGTTTTTGAATCATTGAAATCACATCCACTTCCTCCACGTCT CACTTTAGCAGGTACAACAAAATCATCAAATTAAAGGCGGCGATAAATCC AACTCCAAATTGGATCCCAATAATRCCACGTCAGCCTCGAATGAAATCAA TCAAGCAGCTGCTATGGCCAATGTAAGTGCTTTGTTTTATTTTTTGTACA AAAAAATAATTGCTTATTTCCTTTCGCCTTAAATTGTGAATTCATAATGA ATTGTCTTCTAGTTACAGCTTTATTACTACATGCAAAAGGTGGCAGGCAT TGGAAATGGAGGACCTCCTAGCTCCACTCCATCATCTAGTAGTCCCAAAG AAAGGAAGGAATGTCATGTCTGTGGTAAGACACTCTATGATCGCTCAACT TGGAATCGTCACATGCGGATTCACACTGGGGAAAAACCCTATCCCTGTCG TTTTTGTGGAAGGCGTTTCCGGACAAATTACAACAAGTTAGGTCACGAAA AGAAATGCCCAGATCGCCATAATGGGGAGGGTACAGACGGTGGTGGMAGG GAAAAAGGCTTAGCGCCATCAGCAAATAAAAATACCAATAACACTTCATC CTCCAATAATAATAATACGTCGGTTACTATATCCTGATCATGTATTTCAA TCCTGCAAGCAATCGTCGTCGTCGTCAACCTGATCTCATATCGATCTCAA ATAAGTGTTATATACATAAATATTATATAAAGATCTCATTTTTTATATTT TACAAGCATAATTTAAAATNNNNNNNNNNAAAACAAACAAACTAATTAGA AACAAACAACAAAAAAAAAAGAACATAAGTAAANNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNAAGCTATAATATAAACATACATATTTATATATATAT TTTTATACTTTCTACTATTACACAGTACTTTTTACATTTTTTTGCTTTCA AAAGTTAATTTTTTGATACTTTTTTTAAGTTCCTTTTCATAAGTGTAACT GAAGTAACAACCTACTACATTCATTCAATTGTTTATCTTCGAATTCAATA ACTGCCAATTTTTCAACAACAAATAATAAGAATATCCTGTTCCTAACATG TGTTTTTTTTTTTCTGTTAATGCAAAGCTAGCTAATAACGAGCTTCGAAT GGGAGATCTGAGCTTCTATTATTATTATTACTACAATTATAATTACTATT AATTATTATATGTACCTATACACAACTTTTTTTTCTACTTTTATAGATTT TCTCTTCTACTTTTCATATGAATATATATTTATAATACCTTTTTT
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