EMLSAT00000003820, EMLSAT00000003820-699667 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003820
Unique NameEMLSAT00000003820-699667
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s206supercontigLSalAtl2s206:655159..656551 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003820 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003820EMLSAG00000003820-686586Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000016603EMLSAE00000016603-725531Lepeophtheirus salmonisexon
EMLSAE00000016604EMLSAE00000016604-725532Lepeophtheirus salmonisexon
EMLSAE00000016605EMLSAE00000016605-725533Lepeophtheirus salmonisexon
EMLSAE00000016606EMLSAE00000016606-725534Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779150auto779150Lepeophtheirus salmonispolypeptide
EMLSAP00000003820EMLSAP00000003820Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003820

>EMLSAP00000003820 ID=EMLSAP00000003820|Name=EMLSAP00000003820|organism=Lepeophtheirus salmonis|type=polypeptide|length=322bp
MTVNAAFRKAFEFPFRSNPNWYPGHMRKSLKQLQSLLSITDCVLEVHDAR
IPLSGRNVDFKRTLTGVRPHILVLNKADLSLHGNQDRKNLITQLKMQDPS
LSEVLFTSCLNSSIKKVLPKNXXFXISGDATRVGALPGVTRALQTKIRVN
QDPLTYVWDSPGILFPSMKNESVALKLAVCKCLRDDLIGEKIVADYLLFH
LNKYQHFKYVKTLGLEAPTDNIDTLLTQIAVNHNWINKGGNDAMSRSKIQ
SQVLSLYKQCMRAGETKVGFNVSIRNEFKKNKTIPKTDSIYIEYLLRGGK
RKLNMIKDPHVSGIGYFVDDEK
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mRNA from alignment at LSalAtl2s206:655159..656551-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003820-699667 ID=EMLSAT00000003820-699667|Name=EMLSAT00000003820|organism=Lepeophtheirus salmonis|type=mRNA|length=1393bp|location=Sequence derived from alignment at LSalAtl2s206:655159..656551- (Lepeophtheirus salmonis)
ATGACCGTCAACGCAGCCTTTAGAAAAGCTTTTGAATTCCCATTCCGTTC
CAATCCGAATTGGTACCCTGGACACATGCGTAAAAGTCTGAAGCAGCTGC
AAAGTCTTTTGAGTATTACAGACTGTGTTTTGGAAGTTCATGATGCGCGA
ATTCCACTCTCAGGGCGGAATGTAGACTTCAAACGAACCCTCACTGGGGT
CCGTCCTCACATCCTTGTTCTGAATAAGGCGGATCTTAGTCTTCATGGCA
ATCAAGGTGTAATAAATACAAATAAATATCACTTCTAAGTCTAATATTAA
TAGATTAATATTTACAGATCGTAAAAACCTCATTACTCAACTCAAGATGC
AGGATCCAAGTCTATCCGAGGTTTTATTTACTTCCTGTTTGAATTCTAGT
ATTAAGAAAGTTCTTCCTAAGTGCCTGGAGGTCATTGAAAATTTTCCTCG
CTASGYGCGYGGAGGGGGGGCTGAAAGAAACANTTATTGTCATTGGAATT
CCGAACGTCGGAAAATCATCACTCATTAATCATATTAGAAATAAMCSATT
CAAMATTTCTGGGGATGCAACTCGAGTTGGAGCTCTTCCCGGTGTAACGC
GTGCTCTTCAGACTAAAATACGTGTAAACCAGGATCCATTGACATATGTG
TGGGACTCGCCTGGAATTCTTTTTCCCTCCATGAAGAATGAAAGTGTGGC
TCTGAAATTAGCGGTTTGCAAATGTTTACGAGATGATCTCATTGGGGAGA
AAATTGTCGCAGACTACTTACTTTTTCATTTGAATAAATATCAACATTTT
AAATATGTAAAAACTTTGGGCTTAGAGGCTCCCACCGATAACATAGACAC
TCTTTTGACACAGATTGCAGTGAACCACAATTGGATCAATAAAGTAAAAA
ACCTTGTGAATAACAGCATGGAAGAAATGCCGAATAAAAAACAGGCATCC
ACTTATTTTTTAATGCTATTTCGAAAAGGAAAATTTGGTAGCATCAATTT
AGACTCTGATGAATTAGACACAAAAAACAAAACCTCGGGCAAAATATTAA
TTACTATATAATATATAATTTTCTTATTAATTCATTCCTTTGATTAAATC
CTCATTATCTCAATTCAAATTATTTTTAACTCTTACAGGGTGGAAACGAT
GCAATGTCTCGTAGTAAAATTCAATCTCAGGTTTTAAGTCTTTACAAGCA
ATGCATGAGAGCTGGCGAGACTAAAGTTGGATTTAATGTCTCCATTCGAA
ACGAATTTAAAAAGAACAAGACTATTCCAAAAACGGACTCAATTTATATA
GAGTATCTTTTGCGTGGAGGTAAAAGAAAACTGAACATGATTAAAGACCC
TCATGTGTCCGGTATTGGATACTTTGTGGATGATGAAAAATAA
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