EMLSAT00000003839, EMLSAT00000003839-699686 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003839
Unique NameEMLSAT00000003839-699686
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2089supercontigLSalAtl2s2089:76..636 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003839 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003839EMLSAG00000003839-686605Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000016688EMLSAE00000016688-725616Lepeophtheirus salmonisexon
EMLSAE00000016689EMLSAE00000016689-725617Lepeophtheirus salmonisexon
EMLSAE00000016690EMLSAE00000016690-725618Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto767791auto767791Lepeophtheirus salmonispolypeptide
EMLSAP00000003839EMLSAP00000003839Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003839

>EMLSAP00000003839 ID=EMLSAP00000003839|Name=EMLSAP00000003839|organism=Lepeophtheirus salmonis|type=polypeptide|length=118bp
SVHLAKCRDNNGACYRDGVEECFLPHIAKDCPKTCAGCDECEDLISIEFC
ELYQNRCNTDTPIRYSCRKTCGLCKSDCNNAYYDDAVCEEYKARNTCEDV
FRSTKMKEMCKKTCSDCE
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mRNA from alignment at LSalAtl2s2089:76..636+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003839-699686 ID=EMLSAT00000003839-699686|Name=EMLSAT00000003839|organism=Lepeophtheirus salmonis|type=mRNA|length=561bp|location=Sequence derived from alignment at LSalAtl2s2089:76..636+ (Lepeophtheirus salmonis)
TCCGTTCACTTAGCTAAATGTAGAGACAATAACGGTGCTTGCTATAGAGA
TGGTGTAGAGGAATGCTTTCTACCCCATATTGCAAAGGATTGTCCAAAAA
CGTGTGCCGGATGTGACGGTTAGTATCAAAGTTGTTCCTTTATAATACAG
TAACCAATTAAATGATCTTGTAAATAGAATGCGAGGACCTGATTTCTATT
GAATTTTGTGAACTGTATCAAAATCGATGCAACACGGATACTCCAATTCG
ATATTCTTGTCGAAAAACCTGCGGCTTATGCAGTAAGCTTATTACTTATT
ACTATCTTACCACATAACGCAGCCTTTTTAAATTTAGAGAGTGATTGTAA
TAATGCATATTATGACGATGCAGTTTGTGAAGAATACAAAGCTAGAAACA
CCTGTGAGGATGTATTTCGTTCAACAAAAATGAAAGAAATGTGCAAGAAA
ACCTGTAGTGATTGTGAATAAATACAAAACAAAATTGTTCTACTGAAAAT
AAAAAATAAAAAAAAATTGCAATTGTATCATTTCTTTTTTATTTTTAAAA
ATGAATTATAT
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