EMLSAT00000003873, EMLSAT00000003873-699720 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003873
Unique NameEMLSAT00000003873-699720
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2103supercontigLSalAtl2s2103:8079..11261 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003873 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003873EMLSAG00000003873-686639Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000016842EMLSAE00000016842-725770Lepeophtheirus salmonisexon
EMLSAE00000016843EMLSAE00000016843-725771Lepeophtheirus salmonisexon
EMLSAE00000016844EMLSAE00000016844-725772Lepeophtheirus salmonisexon
EMLSAE00000016845EMLSAE00000016845-725773Lepeophtheirus salmonisexon
EMLSAE00000016846EMLSAE00000016846-725774Lepeophtheirus salmonisexon
EMLSAE00000016847EMLSAE00000016847-725775Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768763auto768763Lepeophtheirus salmonispolypeptide
EMLSAP00000003873EMLSAP00000003873Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003873

>EMLSAP00000003873 ID=EMLSAP00000003873|Name=EMLSAP00000003873|organism=Lepeophtheirus salmonis|type=polypeptide|length=278bp
KSVPHSSINNLKNLDRLDLSENKIDEIHAGEFYGLEKLDTLILNDNQITA
LTENNFEDLDGLTSLYLDRNQISQIHENAFIGLEENLQSLTLTGNKLTEF
PSEALRKLHQLTTLHIDDNSVTTIYENSFQGFGEHIRNLWFQNNHINNIP
APAFQYLHSLEWIKLYNNELKTLSYELMEPVLDTLMHIDIHSNPLECDCN
LRWYRQWITEEWNEIDEDWLKETYCQDPSDNDREHNIAEVAISHMFCEDE
YLDKFAVDDGGGASTYSKDLTNYTTLFI
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mRNA from alignment at LSalAtl2s2103:8079..11261+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003873-699720 ID=EMLSAT00000003873-699720|Name=EMLSAT00000003873|organism=Lepeophtheirus salmonis|type=mRNA|length=3183bp|location=Sequence derived from alignment at LSalAtl2s2103:8079..11261+ (Lepeophtheirus salmonis)
AAAAGTGTTCCACACTCTTCAATTAATAATCTTAAAAATTTGGATCGGTT
GGATCTTTCCGAAAATAAAATAGACGAAATTCATGCTGGTGAATTTTATG
GTAACTTTACATCCTTCACAACTTGTTGTGTTTATGACTTCTTTTTCTTT
TTTCCATAGGATTAGAGAAATTAGATACATTAATTCTGAATGATAATCAA
ATAACGGCTCTTACCGAAAATAATTTTGAAGATCTTGATGGACTCACATC
TCTTTATTTGGATAGGAACCAAATTTCTCAAATACATGAAAATGCGTTTA
TAGGTTTAGAAGGTACATTCCCACGGTCTGCCGCCTAATCCTTGGATATT
TGAATTTAATTAACACTTTATTTTAGAAAATCTACAATCATTAACACTCA
CTGGCAACAAACTCACAGAGTTTCCCAGTGAAGCACTCCGAAAACTACAT
CAACTTACAACACTGCATATAGACGATAACAGTGTGACAACAATTTATGA
AAATTCCTTCCAAGGATTTGGGGAACATATTCGTAATCTATGGTTCCAAA
ACAATCAGTGAGTTTTCATTTGTTTGTCAATAGGATCCATTCAATAATGT
TTGGTTTTAATATTTACTTAGCATCAATAACATACCAGCTCCCGCATTTC
AATATCTTCATAGTCTTGAATGGATCAAGCTTTACAATAATGAATTAAAA
ACTTTGTCCTATGAACTTATGGAGCCAGTTTTGGATACATTAATGCACAT
TGATATTCATAGTAAGGTTTTTTTTATAATGGTCACATCAGGTATTCGGG
CAAAATTGTATCAAACATAACAATGTAGATAATGTATAAATATGTAGCCC
TGGTTGAACAAAAACGTAGATACTTATCTTTTATATAACAGGAAACCCCC
AAAAATCATAACCTTATCATTATTTTGAATATACATTGTATCGTCAATAA
TTTTTAGAACACTACTCAAACAGTAATTTTGAATATATGATATTCTGTAT
TTATCTTAATAATGCCTTGTATAGGCATTATTCGTATATTTAGCGATTTT
GTTCAGCTTAAAAGTTGTTGCATATGCAGCAATAACAAATAAATATGTTA
ACAACAGAGGGTGCTTTAAATATTTAGTAGATTTGATCCTTTAATGTATT
TTACATTTGATTATATGTTTCCTTCTCAAACTCTTCAGTTTTTATAGAAG
TATAGAATACTTCCATCTTTATTTTCCATTGTTTCAGTGTTTTAATTGAT
ATTTATTTACCAGTGCACAATGGAGGAATTATTTAATAAACTGATACAAA
ATTTAAATCACACAATAATTTCAATCATTTAAACAGTTTATCGTATAATT
AAACATGTTTATTTTCTGCGATTTATTTTTTGACCAGTTGGCTAACCTCG
TTGTAAAAAGAATATCCATTAATTGAGCACATCTTATATCCTTTAAATCA
TTCAAAACAATATTTTCAACTGATAAACTAAATACAAAAAAAGATATTAA
ATACACCATTGTTTGATCTTTATATATGTTTAATAGACTGTTGTGTTTGG
TCAATGTTGTAACAGTATATGAAAAATAAAAGGAAAAAAAGAGTAGAAAG
CGATGGATATGGACTGTTGAGTGATTTTGTCTGTCGGTAAATAAACAGTT
TTCCTAATAACAGTAAAATTAATTACTATGACTTGTATGAGGTCATTTCA
AAATGGTGCATCTCTATTTTTTTTTTAAAAAACGCTTCTCAAATTCGAAT
AAGATATCGAATATGTCTCTAACGCAAGGTTGTCAAACATTCGATCCGAG
GGACGTATCCAGCCCCCTATTTTCTTATTAATCTGTGATTCCTATATTCT
CAGTCAAGGACGCCGTGTTTTAGTACTAGTAGACAACATGAAAGTAATAC
TGTGGCAGAACTAACCCCAGTAGGTGGTACCATTTGAGTCTGTTTTGGAT
CTATTAGCAGCAATTTCTTTATTATGTGTTTCCTTTAGCCTCTCACCCTA
ATCAGCGGAATGGCTTTGTCAAGAAGAAAAAAAGTAGACACAAAGAAAAT
GAAGAGAATAAAGAAAATATCATTTTCTCTTATGTTCACAAAAGTGAATG
GAATTGGTATACTACAAGAAGCTTTGATGTTTAAAGAATACAATATTTGG
CACCATTATGAAACTCAGCAGAGTGAAAAAAAAAATACAAGAGCTTCCAG
GGAGAACTGAAAAAAACAAATTGTTAGGGAAGTCATTCACTTGTTGAATG
TGCATTGGAGATGTTAAAAACAGTATTTTAAAGTTCCACAAGGCTGTGAA
CAGATGTTTTGCATCATTGTTACTACCCTCTGATCAGTTATTCATAACGG
ACTTAAATAAATGTTAAACTGAATTAAATGTGTTGTTACAATTGAACATG
CTTTTTGAGTTCTTAGGTCGTTTATAGTCTATTTAATAAAAGGAAAATTC
ATACAATAAATGTGTGTATAAGTGATTTATTCTTCTTTACACTAAGGATT
AGTATTAATAACTAATACAAGTAGCGATGATTTTACTGGCCGCCCCCCCC
CGCCCCYAGAGMTCAAATTAAGCTGTAAAATGAGTTGGACATCTCATCCC
TTAGTTATAACAAAGTTAACAGCTGAAGTCAAATTGAACAGCGTTTGTCT
CTTTTCTGTTTATCTTTTCTCTACGTACATATTTTGAAAAGTGTTGAATA
ATGTTTGTTATTTATATATTAACAGGTAACCCCCTGGAGTGCGATTGTAA
TCTCCGTTGGTATCGACAATGGATTACAGAGGAATGGAATGAAATCGATG
AGGATTGGTTAAAGGAAACTTACTGTCAAGACCCGAGTGATAATGATCGT
GAGCATAATATTGCAGAAGTCGCAATTTCGCACATGTTTTGTGAAGATGA
ATACTTAGACAAATTTGCGGTCGATGTAAGAAGGGGAAAGCATTGAATAG
GGCATGAGGGCTGTGTTCTTAGCCGTAGTTTGTTCACATATCACATTTTC
TCGTTTATTAGTCGTACTTACTGCACCATCTTGCAGATATTTATAATCTT
TTTATTTTGCTCATGCCCTATGCAACATCAAAAGCTCTATTTTATTATTA
TTATTTGTATTTATCTTTTGCAGGATGGGGGTGGAGCTTCAACGTACTCA
AAAGATTTAACGAACTATACAACGCTATTCATT
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