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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s2108 | supercontig | LSalAtl2s2108:805..3601 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000003878 >EMLSAP00000003878 ID=EMLSAP00000003878|Name=EMLSAP00000003878|organism=Lepeophtheirus salmonis|type=polypeptide|length=606bp
MNYKSVSYFHYNIKDIAMCNSRIYSINFFFCIVLTITQRPIPAEFTDNVC
SIQNKCCNMAKNNCCTQGNCYTVWERICDSAIEDHQCQTVGKKVCIPMEV
NSCRTVREKIFRNYIISHCAQSPLRKCFNYKKKICIAKEIVSTKNISWEN
EKLVLDNATAIKKCFDLNTVSCQTVWEIKKIPIPVKKNKTIPKVSKECKM
QNIRETDKVIKVPVSMIINQKVCWIIPEVKCLNKRFPCSQNCPMGDSCHS
LQFQQPLSICPSSYNGKIPTTRYMNNNCININPPICEESICKPYSPNNNQ
KDFNNQQCCRQKKKKICRQVPTRITKLMNKVIPGRVSYKKTCKNVINVIT
KYYWGHEMKIQNKSRNVCKPSLKNECVNITIRTYNIEYETKSNQVNIRLP
VCEYKEVNSEFCHTFPEGNIICRNATVPKSFNLHKIKCDVKKQMNQCAIV
PIVNCKNETLAGSCQLIPRVICPNRKECKSGEACNICEHFRRNIGFHKCQ
FNKCSNFVASDNWKDEKNANNFYRRFHNSFPSDYYQSKPWDYNKNIPSFQ
KTKTNQPMIASKYFTGNIEGPSVHNVIVTEDSDLFMDKXXXXXXXXXXXX
XVIKHT back to topmRNA from alignment at LSalAtl2s2108:805..3601+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000003878-699725 ID=EMLSAT00000003878-699725|Name=EMLSAT00000003878|organism=Lepeophtheirus salmonis|type=mRNA|length=2797bp|location=Sequence derived from alignment at LSalAtl2s2108:805..3601+ (Lepeophtheirus salmonis)
GCAGCACATTAACATTAGAGCAAATCTTTGAATGAATTACAAGTCAGTTA
GTTATTTTCATTATAATATAAAAGATATTGCGATGTGTAACTCGAGAATT
TATTCGATAAATTTTTTTTTCTGTGTGAGTTCTATCTATTTATAATGATG
GATTGTACTGAACATTCAAAAATCAAACTAGTTAGATTAATATATATTTT
AAGTATATAATTGAATTTAAATTTATTATTTGAATATTTTGTTTTTACAA
TTTAAAATGATATTACTATTTCCATTTATTATAATATACATATTAAAAAT
ATGCATAAAATCTATAATGTATTTACTATAATTTACATACTTCATTTCTT
GGAAATTGTTATGCAATCCAAAATATTAAACTTAATAAGATTAAATGTAA
TTAATATTATTTCCAAGACATTTTTCTGTTTTAATTAAACACTAACATCC
TAAGCACTATCATATTTAAGTCTATTGAATGGATGACATGAGAAAAGAAA
TGTATCAAAAGGCTCCAAATCGAGAGAGTTTAGGATAATGTGTTCTAATA
AATATAATCAGCTAATACCTGATAAGTATTTAGAAATAATATACTCTAAA
TCATGTACTCTATTTAAACCAATTTAAATCCAGATCGTCTTAACCATTAC
TCAAAGACCAATTCCAGCAGAATTCACTGATAATGTTTGTTCTATTCAAA
ATAAATGTTGTAATATGGCGAAAAATAATTGTTGTACTCAAGGAAATTGC
TATACAGTTTGGGAAAGGATTTGTGACTCAGCCATAGAAGATCATCAATG
TCAAACAGTAGGTAAAAAAGTTTGTATACCAATGGAAGTCAACTCGTGTC
GTACAGTTAGAGAAAAAATATTTAGGAATTATATAATATCCCACTGTGCT
CAGTCTCCTCTGCGCAAATGCTTTAATTATAAAAAAAAAATTTGTATAGC
AAAGGAAATCGTATCTACTAAAAATATAAGTTGGGAAAATGAAAAACTCG
TCCTGGATAATGCAACAGCGATAAAAAAATGTTTTGATCTCAATACTGTG
AGTTGTCAAACTGTTTGGGAAATTAAAAAAATACCAATACCAGTTAAAAA
AAATAAGACTATTCCAAAAGTTTCCAAGGAATGTAAAATGCAAAATATTC
GTGAGACAGATAAAGTCATAAAAGTTCCCGTGTCCATGATAATTAATCAG
AAAGTTTGTTGGATAATTCCCGAAGTTAAATGTCTCAATAAAAGATTTCC
TTGTTCACAAAATTGTCCCATGGGCGATTCGTGTCATTCTCTACAATTTC
AGCAACCTTTGTCAATATGTCCTTCATCATACAATGGAAAAATTCCTACA
ACAAGATATATGAATAACAATTGTATAAACATAAATCCCCCTATATGTGA
AGAAAGTATATGCAAACCATACTCACCAAATAATAATCAAAAAGACTTCA
ATAACCAGGTAAAGATAATGACATATTATCTTAAAGAAAATTACATTTAT
GTTATAAGTTAATGATCAAATTTTTTCATCTGATATTTTATTAAATATCT
TTAAACACTAACAAAGAATTATAATTTATTTTTTTAGCAATGCTGCCGTC
AAAAAAAAAAAAAAATATGCCGTCAAGTGCCGACAAGAATTACTAAATTA
ATGAACAAAGTAATACCAGGAAGAGTAAGCTATAAAAAAACTTGTAAAAA
TGTTATAAATGTGATAACCAAATATTATTGGGGCCATGAAATGAAAATTC
AAAACAAAAGCAGGAACGTTTGTAAACCTTCACGTATGTGCTATAAATGA
TGTTTTTGTATTTTTATACTAACAATCAGGTTATTTTTTTTTATAGTAAA
GAATGAATGTGTTAATATTACTATTAGAACCTATAACATTGAGTATGAAA
CAAAAAGCAATCAAGTCAACATTCGTTTACCAGTCTGTGAATACAAAGAA
GTAAATTCTGAATTCTGTCATACGTTCCCAGAAGGTAATATAATATGTCG
TAATGCAACGGTTCCAAAAAGTTTTAATCTACATAAAATAAAATGTGATG
TAAAGAAACAAATGAATCAATGTGCAATAGTTCCTATTGTCAACTGCAAA
AATGAAACCTTGGCTGGTTCTTGTCAGTTAATTCCAAGAGTGATTTGTCC
AAACAGAAAAGAATGCAAGTCAGGAGAAGCATGCAATATATGTGAACATT
TTAGAAGAAATATTGGATTTCACAAATGTCAGTTCAATAAATGCTCAAAT
TTTGTAGCATCTGATAATTGGAAGGATGAAAAGAATGCAAATAATTTCTA
TAGACGATTTCATAACTCTTTTCCTTCTGATTATTATCAATCAAAGCCTT
GGGACTATAACAAAAATATACCTTCCTTTCAAAAGACCAAAACCAATCAA
CCAATGATAGCTTCGAAGTATTTTACAGGAAATATTGAAGGCCCTAGTGT
GCATAATGTCATAGTAACTGAAGACTCTGATTTATTTATGGATAAATNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTCATCAAACATACA
TGAATAAGAATTTTGACATTAACTTCAACATTGATAAAAATTGACATATT
AAGATAATAATAAATATTGATATATCAAGGAAATGGACACTCGATGGTTG
CAGATAGTATTTCATCATACAAATATATATATATATTTTTAATATCAACA
AAAATTATATATTTTTTTTAACAATTTTTGATAAAAACAACAATGATTAA
AAGTAATATTGTAAACTTATAATTATTAACTCATCAAATTATGTTTG back to top
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