EMLSAT00000003887, EMLSAT00000003887-699734 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003887
Unique NameEMLSAT00000003887-699734
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s210supercontigLSalAtl2s210:227711..228889 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003887 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003887EMLSAG00000003887-686653Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000016891EMLSAE00000016891-725819Lepeophtheirus salmonisexon
EMLSAE00000016892EMLSAE00000016892-725820Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774886auto774886Lepeophtheirus salmonispolypeptide
EMLSAP00000003887EMLSAP00000003887Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003887

>EMLSAP00000003887 ID=EMLSAP00000003887|Name=EMLSAP00000003887|organism=Lepeophtheirus salmonis|type=polypeptide|length=330bp
MSSIFITTTLLTEEVGNWYLATESSRLRIANSVSVKDTCGPEAAKRVRNS
RSWMKGAFIYYVNESPVHDCQFDFNLYDGVFNWTMDYLPNADIPSMYGNT
YKVKKIQPVPNIKSILRKKKQLLFWISTHRLSRGKRDDYFELLTEHISAD
KYGALGPNYCPDSPNPMRVDCKKHFSPYYKFYFASENSLCNDYVTEKYFQ
ALRLPIVPVVYGKANYTVISPPHSFIDVRDFKSPKALAEYLTYLDKNDTA
YAEYFQWKLDGHYIVSSTAQEAKKTLCRLCDKLNNLDHSPAYTSAEMNKY
WRGTNGKPACSTPEDIIPGLKEGISKRRKT
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mRNA from alignment at LSalAtl2s210:227711..228889+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003887-699734 ID=EMLSAT00000003887-699734|Name=EMLSAT00000003887|organism=Lepeophtheirus salmonis|type=mRNA|length=1179bp|location=Sequence derived from alignment at LSalAtl2s210:227711..228889+ (Lepeophtheirus salmonis)
ATGTCAAGTATATTTATTACTACTACACTGCTTACGGAGGAAGTTGGGAA CTGGTATTTGGCTACGGAAAGTAGCCGTTTGAGAATTGCGAATTCAGGTA TTTTAAGTCTTGAAGACATTACAATACATATTTTATTAATATATCTGTCA TTTCTATACATATTAAGCGTTGTACAAAAAATCATTATAGTCATAATTAA ATATAAATATTCCTTTAGTAACTGCTATCTCTCCGGAGACTACTCAAAAC CTATTCCATTTCATAAATATTCGGCAACTATAGTTTCTGTCAAAGATACT TGTGGTCCAGAAGCTGCTAAACGCGTACGAAACAGTCGAAGTTGGATGAA AGGCGCTTTCATCTATTATGTAAATGAGAGTCCAGTACACGATTGCCAAT TTGATTTTAATCTATATGATGGCGTATTCAATTGGACAATGGACTATCTC CCAAATGCTGATATTCCATCAATGTACGGTAATACCTATAAGGTGAAAAA AATACAGCCCGTTCCGAACATTAAAAGTATTTTGAGGAAAAAAAAACAAC TTCTATTTTGGATTTCTACACACAGATTGTCAAGGGGGAAAAGAGACGAT TACTTTGAGCTTCTAACTGAACATATTTCTGCAGACAAATATGGAGCATT AGGTCCTAATTACTGTCCTGACTCACCCAACCCCATGAGAGTCGATTGTA AGAAGCATTTTTCTCCCTATTACAAATTTTACTTTGCATCTGAAAATTCG TTGTGTAATGACTATGTGACGGAAAAGTATTTTCAAGCACTACGTCTCCC TATTGTACCTGTGGTATATGGTAAGGCCAATTACACAGTAATCTCACCTC CACATTCATTTATCGATGTAAGGGATTTCAAGAGTCCAAAGGCTTTAGCC GAATATCTCACATATCTTGATAAAAATGATACTGCCTACGCAGAATACTT CCAATGGAAACTAGATGGTCATTATATAGTTAGCAGTACAGCACAAGAAG CTAAAAAGACTCTTTGTCGTTTATGCGATAAGTTAAATAATTTGGATCAT AGTCCTGCATATACGTCAGCTGAAATGAATAAGTATTGGAGAGGAACAAA TGGAAAACCTGCTTGTAGCACACCTGAAGACATAATACCAGGTTTAAAAG AAGGAATATCAAAGAGACGCAAAACATAG
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