EMLSAT00000003907, EMLSAT00000003907-699754 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003907
Unique NameEMLSAT00000003907-699754
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s211supercontigLSalAtl2s211:1027867..1030167 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003907 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003907EMLSAG00000003907-686673Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000016958EMLSAE00000016958-725886Lepeophtheirus salmonisexon
EMLSAE00000016959EMLSAE00000016959-725887Lepeophtheirus salmonisexon
EMLSAE00000016960EMLSAE00000016960-725888Lepeophtheirus salmonisexon
EMLSAE00000016961EMLSAE00000016961-725889Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780282auto780282Lepeophtheirus salmonispolypeptide
EMLSAP00000003907EMLSAP00000003907Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003907

>EMLSAP00000003907 ID=EMLSAP00000003907|Name=EMLSAP00000003907|organism=Lepeophtheirus salmonis|type=polypeptide|length=156bp
MTEENPIYAPFFGVMGATAAMVFSAMGAAYGTAKSGTGIAAMAXMRPEAI
VKSSIPVVMAGILAIYGLVVAVLIAGKVGKPAEYSLFLGFVHLGSGLSVG
LSGLAAGYAIGIVGXAGVRGTAQQPRLFVGMILILIFAEXLGLYGLIVAI
YMFTLG
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mRNA from alignment at LSalAtl2s211:1027867..1030167+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003907-699754 ID=EMLSAT00000003907-699754|Name=EMLSAT00000003907|organism=Lepeophtheirus salmonis|type=mRNA|length=2301bp|location=Sequence derived from alignment at LSalAtl2s211:1027867..1030167+ (Lepeophtheirus salmonis)
TGTATGGCTGAATTGGCGTATTTCCCTCTCTTTTTTTGGAGAACGGTAAA GAGTGACTTGTCCTATTTTTTTTCCTTTTTCTTTTCTCCTTCCTTTTATC TATTGGTGCTAGCTAGGCAGAGTTTGATATATTATTGTGAATTGTTGGAA TAGCACTTGGACAGTTGCAGCATCGCTTCACGTAAACTTGGAGAAGGAGG CAGAGTTTTAGTGAGAAGAGGACTCTTCATTATTCAATATTAAGACACCT TAAGATAGAATTTTCTGCATTCCTGGATAATTCATTGGATCGCACCTTTA TTGGAGTAAGTTATTATTATTAGTATTGTTAAGGTTCTTTGGGATGAAGA GTGGAATATGATATAAGGATGGATGAGGAGAATGTCTTGGGTTAGTCCTG TGACTCCTTTAGTGAATCACGTGCAGAATGAAGGAGAAGAAGTCTCCTTT TTGAGTGGGGGGAGGGCAGTAAGAAGGGATCGATAGAGCGAGAGCCCTGT GTGAGAGAAGGAGGCGGAAAAGAGAGAGAGAAAAGAAACGAAAAGCCTTT CCTTTACTTGATTTTCATCTTTAGCAATTCATTCCTCGAGACCCTATTTT AGTGAGTAAATCAAGACATCCTCCTTGATATTCCTTATTAGATATTGCAA AGAGTTCTACACGGGTGGGTTGGAGTAAGAAGAAGGAGTAGTTGCCATTG ATTCTGATAAGACAGAACGGAAATGCAATTTCCTTACTTTTAATCCCCTC CATTAAAAGCCTATGATTGGATATTATCTACTAATTCATCATCTTTCTCT TTTTAGAATCAAACCCATACGTTAGCAACTTTTTAATTCACAATGACAGA AGAAAATCCTATCTACGCTCCTTTCTTTGGTGTTATGGGCGCAACAGCCG CCATGGTCTTTAGTGCCATGGGCGCAGCTTATGGTACTGCCAAGTCAGGT ACTGGTATTGCAGCGATGGCTGMTATGCGGCCCGAAGCTATCGTCAAATC TTCCATTCCTGTCGTTATGGCGGGTATCCTTGCCATTTATGGACTTGTTG TCGCTGTCCTTATCGCCGGAAAGGTGGGAAAACCTGCAGAATACTCTCTT TTCTTGTAAGTGCGATAGGTTATATTATACTACTCACCTTTCCTTGAGGG TGTACATCTATTATATTTTATACCTATTTTCAGAGGGTTTGTGCATTTGG GATCTGGATTATCTGTCGGATTATCTGGACTCGCAGCTGGTTATGCTATA GGTATAGTGGGGGYTGCTGGGGTTCGAGGTACGGCGCAGCAACCGAGACT CTTTGTTGGAATGATTCTAATCCTTATTTTCGCTGAAMTATTGGGTCTTT ATGGATTGATTGTAGCCATTTATATGTTTACATTGGGCTAAAAAAATGGT CCATCAGCTCCTTATATCTCATTTATTACACAATTTTATTTATAATAATT CTAAAGCTCGTCAGTAGGAAAAAAGACCTTATTCCTTGTTGGTCCTCTCC ATTAGAAAAGAAAGAAAAAAGAAGTCATTCTCTCACCACTGAACAACGAG GAACCTAATTATATCATTGAAATGATGTTTACAAAAAGCCTATCCAAGCG TTTCACTAACTTATTCTTATCAGAAAACTTCAAATAATAGTCACAGCCTT TAACTGGAATATACACCTTTAATTTTTTAATGGTTATGAAGATGTTTACG TCTAGTAATTAAGGGATTAAAAAAATTGATCTTAGTAATTACATATATAT ACTTGATGCATTTTACTTTGGGTAGGCTTATGACGTGACTGTGCGACTTT AAATTATTTTCCTCTCCATACCATCATCAATTCATATGAATGGCTGATAA ACGATACAATTGTGAAATGTGTGCTTTATTTGTTATTTTTTTTCTTCATT TAGTCTGAATCAATTTTAACGAGAGTCTTTAAGGTTATAGATATGTACTG TAATTTTTATAACTTAAATTTAAAAAAGTTGTCAATCTTCATAAATTTTA TTTTCAAATAGTTCAAAAAAAAAAAGAAAAGAATATTTAACACTTTATTT CAACAAATCTGACACATTATTATCTTTGTATGAAACTTTCCAAGTATTTA TCTATTCTGATTGTCAAAAGGCACTGCAGTAGTTCATTTAAGGACAAACA GCTCAGATAAGTTATAAATGGCAATTTGTCATTTTAAAAAAAAGTTATCC TTAATGGATCTTCAGCGCCATTTTGAAATTTTCATTTCTTTTGTATAATT ATAATTATTATTTGATGTGATACATCCCCAAATATACCCTTTAATATATA T
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