EMLSAT00000003941, EMLSAT00000003941-699788 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003941
Unique NameEMLSAT00000003941-699788
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s211supercontigLSalAtl2s211:791582..792177 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003941 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003941EMLSAG00000003941-686707Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000017085EMLSAE00000017085-726013Lepeophtheirus salmonisexon
EMLSAE00000017086EMLSAE00000017086-726014Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779732auto779732Lepeophtheirus salmonispolypeptide
EMLSAP00000003941EMLSAP00000003941Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003941

>EMLSAP00000003941 ID=EMLSAP00000003941|Name=EMLSAP00000003941|organism=Lepeophtheirus salmonis|type=polypeptide|length=158bp
MNKTSRKIVPGDPFVFHFKCTWDESPGHTRHLVLIFYREDETLEIRENHG
VNCGRYKAPIFLKRGRPLKSNPEGYLPPPGFREDRILLNVVRSRGPGKLR
DNYLKDNADDSYAKKRAYYTEDDFDVGKILKIEGREILIIDCDPATRNYY
KKAHLRGE
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mRNA from alignment at LSalAtl2s211:791582..792177+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003941-699788 ID=EMLSAT00000003941-699788|Name=EMLSAT00000003941|organism=Lepeophtheirus salmonis|type=mRNA|length=596bp|location=Sequence derived from alignment at LSalAtl2s211:791582..792177+ (Lepeophtheirus salmonis)
ATAATATTTAAAATAAATTGTTCACAAAAAGTAAGGAGATAATATGAATA
AAACAAGTCGCAAAATAGTTCCAGGAGATCCTTTTGTCTTTCATTTCAAA
TGCACTTGGGATGAGTCCCCCGGACATACTCGTCATCTCGTTTTGATTTT
CTACAGAGAGGATGAAACACTTGAAATAAGGGAGAATCACGGTGTTAACT
GTGGTCGCTATAAGGTATATAACTGTAAAATAAATTGGCCAAATCATCAT
CATATTCATTTTTACACCACCTACGTACATATTTATATAGGCACCCATAT
TTCTAAAAAGAGGAAGGCCATTAAAGAGCAATCCAGAAGGATATTTGCCA
CCTCCTGGGTTCAGAGAAGATCGTATACTACTTAATGTAGTAAGAAGTCG
AGGCCCTGGTAAACTTCGGGATAACTACTTAAAGGATAATGCGGATGATT
CATATGCCAAGAAAAGAGCCTATTACACAGAGGATGATTTCGATGTTGGG
AAAATCCTTAAGATCGAAGGAAGAGAAATTTTGATAATCGATTGTGATCC
TGCTACCAGAAACTACTATAAAAAGGCACATTTAAGAGGTGAGTAG
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