EMLSAT00000003946, EMLSAT00000003946-699793 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003946
Unique NameEMLSAT00000003946-699793
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s211supercontigLSalAtl2s211:896432..899360 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003946 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003946EMLSAG00000003946-686712Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000017110EMLSAE00000017110-726038Lepeophtheirus salmonisexon
EMLSAE00000017111EMLSAE00000017111-726039Lepeophtheirus salmonisexon
EMLSAE00000017112EMLSAE00000017112-726040Lepeophtheirus salmonisexon
EMLSAE00000017113EMLSAE00000017113-726041Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780030auto780030Lepeophtheirus salmonispolypeptide
EMLSAP00000003946EMLSAP00000003946Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003946

>EMLSAP00000003946 ID=EMLSAP00000003946|Name=EMLSAP00000003946|organism=Lepeophtheirus salmonis|type=polypeptide|length=203bp
MINWLNEMNNRDVVVLYFGAIDFEESTYPALEKLLKVPLINERLNKDYKT
NKKWPTLGKAIGEKNNIFIFMRTNNPIDDKEFHREVPFHKKHKQTLSKDD
IIITSTYKDGPIGTDCKTYVDNAMELCHNQGDLLKVAAFGAGFKVWTCLW
ESARICNPRLKDAIEGCQSKTEIINFIQMDFPNYLGKNGKVPIDVIHNMN
HLN
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mRNA from alignment at LSalAtl2s211:896432..899360+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003946-699793 ID=EMLSAT00000003946-699793|Name=EMLSAT00000003946|organism=Lepeophtheirus salmonis|type=mRNA|length=2929bp|location=Sequence derived from alignment at LSalAtl2s211:896432..899360+ (Lepeophtheirus salmonis)
CTAAACTTGACAAAATGAACACCGGTACCGTAATCTGGTAGTTACTAATT
AATTACTCAGAAGAGATTTGTAACAGATACTCAACTATTCTACCATGACA
GAGTGTTTCATTGTTATAAACCTTTATTGTTTAGGCCCCCAAATGGACAA
CATCAAAATTGTGACGTCAGAATAGGCCAGAGGGAGACTCATTTTTTTAT
TATTATTACTAATAATATATTATCAAGTGTTAAAACATTCATGATTTTTA
TTATKTTCCCCAAMATACAAGACGTGACGATCAATATTCAGTGTATCAAA
GCTGTGTAATATAAGAACAGTTTGAAATATTTCGTTTCAAATCATGTTCA
TGAACAATACCTATTGTTGTTTCTATATTATATTGAGTCTATGCGTTGCT
ATTATCGTCCTCATTGAGACGGCTAATGGATTCAAATTACGCATTGCTCA
ATTTCAAGTTTCGAACAAGAAAAGTGCAGGAATGGATGGAGGTTTCCTGG
GTTTTCTCAACCTTGGAGGAGGGGAATTTCGCATTAAAGTATAGAAAATC
TAAACTTTTTTAAGCAATGACATTCTAATTATTACTATGTGAATATATAT
GTTTTTTTATAAACTACTCATCAGATATGCAATGAGATGACAAATATTTG
TTGTGAGACATTAGATCCATTAGAGACACAAAATAATGATTGGGAACAAT
CTGAGATCAACTTTTTCATCGGAAGGCAACTACAAGATTGTGAAAACTTT
GAAATGACAGGATGCATTTCTTTAACAATGATCCACGAAGGCAATGACGG
AGGMGAGTTGGAAAATGTCACATTTTATGGTTCAGACTTTGGATATGGAG
AAAATAATCGGCAAGAATACATATGCCCTATTAGGGTCAAGTTGGATGGT
TACAACTCAATAAAAGTGGCATGTACATCAAAAAATAACACTTATGATCC
AAATAGTAAATTCTTCTTTACCACATATTTAATACATATTAATAACTAAA
CGGATATTACAGGAGCATGTAATGGAGATGAAAGGTTTTGCCATATACCA
TTTAGTCGATTTACATTTTTTGGTACTCACAATGCTGGTACTGGAGAAGA
TATCTCCAGCATTTCCAAGATTAATTGTGCTTTTAAAAATCAAGATTTGA
ATGTGAGGGAGCAACTTGACTTTGGAGTTCGCTTCTTTGATCTTGATATC
ATTCAGAGGTTTGAACAAAAAAAAACTTAACTTTTAAAAAATATTAGCAC
GAATAATTTTCTTCTTTCCAAAAATGTTAAGTAAAAACCTATACAACTGT
GATGGCTTAGAATCTGGACATGGCAAATACCCAGAATTGGGCTTGTACCG
CTGTTTCGGTAAATTGGAAATATTCGTAGAGGAAATGATCAACTGGTTAA
ATGAAATGAATAATAGAGACGTTGTTGTTTTATATTTTGGTGCTATAGAC
TTTGAGGAGTCCACGTATCCAGCACTGGAAAAACTATTAAAAGTTCCTTT
AATCAATGAAAGACTAAATAAGGATTACAAAACGAATAAGAAATGGCCGA
CTCTTGGAAAAGCAATAGGAGAAAAAAACAATATCTTTATTTTTATGAGA
ACTAACAATCCTATTGATGATAAAGAATTTCATAGAGAGGTTCCTTTTCA
TAAAAAACATAAACAAACCTTATCTAAAGATGACATTATCATCACAAGCA
CGTATAAAGATGGGTAATAACTATACTTGTACAGTTCTAGACTATAACTT
CGATTTTACATTCTTGTTTATATTCAGACCCATCGGCACAGACTGTAAAA
CTTATGTGGATAATGCTATGGAACTATGCCATAATCAAGGCGATTTATTA
AAAGTAGCGGCTTTTGGAGCAGGATTCAAAGTGTGGACGTGTCTTTGGGA
ATCAGCTAGAATATGTAATCCAAGATTGAAGGACGCTATTGAAGGCTGTC
AATCCAAAACTGAAATAATCAACTTTATACAAATGGACTTTCCTAATTAT
TTAGGGAAGAACGGRAAAGTACCCATCGACGTTATACACAACATGAACCA
TCTTAATTGACACTTGAATATACTTTTTAATAATTAAACTACTGTAATTG
AAATTTACAAAAAATAAAAAAACCCTTGCTACTTACATATTAGTAGATGA
GAGGGGCTCCAAGAATGTCTTTTGAATAGCGGTCAAGCAACGAATAAAAT
CCATTTCCTTTTTGAGCAGATCCTCTATCACTTGTTTTCGATTATCAATA
CCTTTTTGAATGATAAGGGAGCCGAGCATGAGCTGGGCTTTGTCGTCGTC
TGTCATGTCCTCAGTCTTAGGGATGCAATACTTGGAGTTGTCTTGGGAGG
AATCATCCAAGACTCGAACATAGTTTGAAGGAAACCAGCCTGTCTTTCCT
CTTCGGGAATGCGTTCCCTCCCACCAACCACCATCTTCGCGCTGGGTTAC
CGTTATCACATCTCCGATATCAAACATTAACTACAAATACAAGAGCACTC
CCATTACATACACAATCACTTCTGCCTCAACATAACAACAACAAAAATTA
GGAGTCAAACTACTGCCATGAGTTTTAGGTGTAGTTTAGAATAGGGCTAC
TTTAAGTGGAATAGACGCCACACCCAAAGGGATCATAAAAAAATACAAGA
GTAGAAATGAGTCATTCTAGCTTGCTTATGTATTGACACACTACAACTGT
GGAGGACAACACGAATCCAAAATACACATTCCATCTATCCAATCCTAATT
ACAAGTCAGGAAAAGTCAGGAAAAGTCAGGAATTCATGAATGGARCCCAA
GCCCTGGCCTGCCTATTAGTTACTCAAAAGGATGCATCCTCAAGTCCCGA
GGGGATTTTTTTTTCTTTCCAACCCACCTCATCATTGTTGCTGCCTTTGA
ACTTATAGATGGCTTGTACCAAATTCGAA
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