EMLSAT00000004077, EMLSAT00000004077-699924 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004077
Unique NameEMLSAT00000004077-699924
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s216supercontigLSalAtl2s216:800720..802148 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004077 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004077EMLSAG00000004077-686843Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000017697EMLSAE00000017697-726625Lepeophtheirus salmonisexon
EMLSAE00000017698EMLSAE00000017698-726626Lepeophtheirus salmonisexon
EMLSAE00000017699EMLSAE00000017699-726627Lepeophtheirus salmonisexon
EMLSAE00000017700EMLSAE00000017700-726628Lepeophtheirus salmonisexon
EMLSAE00000017701EMLSAE00000017701-726629Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779767auto779767Lepeophtheirus salmonispolypeptide
EMLSAP00000004077EMLSAP00000004077Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004077

>EMLSAP00000004077 ID=EMLSAP00000004077|Name=EMLSAP00000004077|organism=Lepeophtheirus salmonis|type=polypeptide|length=252bp
MNMDKEDYNKKKEDSSPHEEFQDAFDTFQAPKPSEDKFQDVEGSGEEDEA
EAVDEEKRLENERRAKEDKMSPEERNTLKEEALELKKKGNEAYLSGDNEA
AFQLYSQAINTCPLTFTEDRSYIYSNMAXSRLKQDRKEEAKXLCXTAIEL
NPSYVKALARRATLYEGLDKPHEAFEDAKKILELDPRHKESLSAIQRLPD
KIKEKDEKMKAEMFDNLKKLGNMVLNPFGFSTENFKFTQDPNTGGYSVNF
SK
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mRNA from alignment at LSalAtl2s216:800720..802148-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004077-699924 ID=EMLSAT00000004077-699924|Name=EMLSAT00000004077|organism=Lepeophtheirus salmonis|type=mRNA|length=1429bp|location=Sequence derived from alignment at LSalAtl2s216:800720..802148- (Lepeophtheirus salmonis)
ATGAATATGGATAAGGAAGATTATAATAAGAAAAAAGAAGATTCTTCTCC
ACACGAGGAGTTCCAGGATGCTTTTGACACGTTCCAGGCACCTAAACCTT
CGGAGGATAAGTTCCAGGATGTTGAGGGGTCGGGAGAAGAAGATGAAGCA
GAAGCAGTGGATGAGGGTTGAGTTCCATTTGATTTTATTTTTCTTCCCAG
TTTTCGGGAGAATTTTTATTAATTTCCTAAGTTTAGAATCCTAATTTTGT
TCCTCCTACCTTTCAGAGAAACGTTTGGAGAATGAAAGAAGAGCCAAGGA
GGATAAAATGAGCCCTGAGGAACGGAACGTAGGTCTWCTTMCCCCCCCCC
CCCCCAAATTTACCACAACATCCAGATACGTCACTAATTAATCTCTTTTC
TCCAGACATTAAAAGAGGAAGCTTTAGAACTTAAAAAGAAGGGGAACGAA
GCCTACCTCAGCGGTGATAACGAAGCTGCCTTCCAACTCTACAGCCAAGC
AATCAACACATGTCCCCTTACCTTCACAGAGGATCGTAGCTACATTTATT
CCAATATGGCTGSATCTCGCCTCAAACAAGATCGGAAGGAAGAGGCTAAA
GAWCTTTGTAGSACTGCCATCGAATTGAATCCGTCTTATGTTAAAGCTCT
TGCTCGAAGAGCCACTCTATATGAAGGATTAGATAAACCGCATGAAGCTT
TCGAGGATGCCAAGAAAATTTTAGAGTTAGATCCTAGACACAAAGAGAGT
CTCTCCGCAATACAGGTAATTAATTTGAAGTCTATTTATTAGGAATACAT
ACATAATTAATGTGCTCACTATCAATAGTAGAAATAGATACAATGTACAT
GTAATATAAAAATAAATAATTTGTAGACATGTTAAGGATAAATTTGAAAA
ATAAGTTTTGAGTACATGAATACAATAAATATTTTAATACAGTAGTAAGG
ATTTGTTATGAGTGAAATGGTGTTGCTAATTTTAATGACATAAAATAGGG
TAGAGTAATGAAGATAATTACGATTCAATCATTGCATTGGTGTATGACGA
TTGGCGATTTCGTATTTGTTGGGGTTTTTTCTTCTTAATGGAAAGAAAAT
ATTTTTATTGTCTTATTATTTAAGCTCTGTATCTTGATTTGACTAGTATA
TGATATTTCGATCCCTTTATTATTTTCAGAGATTACCTGACAAAATCAAA
GAAAAGGATGAAAAGATGAAAGCAGAGATGTTTGGTACGTAGAACGTTGA
TCCTTTGTTAGTTAGTTGTTATCCATCGAATTATTACTGAAATCCTTGTT
ATTATTATTTCAGATAATCTTAAAAAGTTGGGAAACATGGTGTTAAATCC
CTTCGGTTTCTCCACTGAGAATTTTAAATTCACGCAGGATCCAAATACTG
GGGGATACTCTGTCAACTTTTCGAAGTAA
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