EMLSAT00000004224, EMLSAT00000004224-700071 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004224
Unique NameEMLSAT00000004224-700071
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s222supercontigLSalAtl2s222:1022886..1023397 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004224 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004224EMLSAG00000004224-686990Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000018324EMLSAE00000018324-727252Lepeophtheirus salmonisexon
EMLSAE00000018325EMLSAE00000018325-727253Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780275auto780275Lepeophtheirus salmonispolypeptide
EMLSAP00000004224EMLSAP00000004224Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004224

>EMLSAP00000004224 ID=EMLSAP00000004224|Name=EMLSAP00000004224|organism=Lepeophtheirus salmonis|type=polypeptide|length=113bp
MSLKNTRKRIVLTVEQRLKCIKMNEEGHKRKLLVDRRFKYSTVNKRVIEW
VMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLSRNQLSN
AEGTEVQPDTIEE
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mRNA from alignment at LSalAtl2s222:1022886..1023397-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004224-700071 ID=EMLSAT00000004224-700071|Name=EMLSAT00000004224|organism=Lepeophtheirus salmonis|type=mRNA|length=512bp|location=Sequence derived from alignment at LSalAtl2s222:1022886..1023397- (Lepeophtheirus salmonis)
ATGTCCTTAAAGAATACACGAAAAAGGATTGTTTTGACGGTGGAACAGCG
ATTGAAGTGCATAAAAATGAATGAAGAGGGTCACAAAGTTTGTACAGCAC
TCAATACATAGGTAGTTTAATAAAGAATACGAATGTATTTAATATTATCT
TATGCTACAAAGATTCAATAGATTCTTGGTGTCGGTAAAACTACGAAATG
CTGAAAAATAAAGAGAAAATCCTAAGTGATTATATTTCTGGTACTCTATC
TGGTTAGCGTAAACTTCTCGTGGATCGTCGTTTCAAATACTCTACCGTTA
ATAAAAGAGTAATAGAATGGGTTATGGCTTKTCGTTCAAAAAATGTCCTA
CTAACTGGAACTCTCATCATGGAAAAGGCAGCTACTTTCGCTTTGTCTAT
GGGTTTGAATCACTTTGAAGTGTCTCAGGGATGGCTGCAGAAATTTCTCT
CAAGGAATCAACTCAGCAATGCTGAAGGGACGGAAGTTCAACCAGATACT
ATTGAAGAATGA
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