EMLSAG00000004224, EMLSAG00000004224-686990 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000004224
Unique NameEMLSAG00000004224-686990
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
BLAST of EMLSAG00000004224 vs. GO
Match: - (symbol:TIGD6 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR004875 InterPro:IPR007889 InterPro:IPR009057 Pfam:PF03184 Pfam:PF04218 PROSITE:PS50960 GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR006600 Pfam:PF03221 SMART:SM00674 PROSITE:PS51253 TreeFam:TF101131 GeneTree:ENSGT00740000115260 OMA:KAVCRED OrthoDB:EOG71G9TH EMBL:AAEX03003103 RefSeq:XP_005619359.1 RefSeq:XP_005619360.1 ProteinModelPortal:F1P9F2 Ensembl:ENSCAFT00000028968 GeneID:100856203 Uniprot:F1P9F2)

HSP 1 Score: 53.5286 bits (127), Expect = 7.215e-8
Identity = 25/73 (34.25%), Postives = 43/73 (58.90%), Query Frame = 0
Query:   27 GHKRKLLVDRRFKYSTVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLSRNQLS 99
            G +RK +  R   Y  ++K V  W     +KN+L+TG++I +KA   A  +G ++F+ S GWL +F  R+ ++
Sbjct:   64 GPQRKRM--RNALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANMLGYDNFQASVGWLNRFRDRHGIA 134          
BLAST of EMLSAG00000004224 vs. GO
Match: - (symbol:TIGD6 "Tigger transposable element-derived protein 6" species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] InterPro:IPR004875 InterPro:IPR007889 InterPro:IPR009057 Pfam:PF03184 Pfam:PF04218 PROSITE:PS50960 GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689 eggNOG:NOG265486 InterPro:IPR006600 Pfam:PF03221 SMART:SM00674 PROSITE:PS51253 TreeFam:TF101131 EMBL:AL136539 EMBL:AK056604 EMBL:AK096325 EMBL:CR533559 EMBL:BC117249 RefSeq:NP_001230182.1 RefSeq:NP_112215.1 RefSeq:XP_005268573.1 UniGene:Hs.169333 ProteinModelPortal:Q17RP2 SMR:Q17RP2 BioGrid:123582 MINT:MINT-4718610 PhosphoSite:Q17RP2 DMDM:124053415 PaxDb:Q17RP2 PRIDE:Q17RP2 DNASU:81789 Ensembl:ENST00000296736 Ensembl:ENST00000515406 GeneID:81789 KEGG:hsa:81789 UCSC:uc003lri.3 CTD:81789 GeneCards:GC05M149372 HGNC:HGNC:18332 HPA:HPA044599 neXtProt:NX_Q17RP2 PharmGKB:PA38525 HOGENOM:HOG000136548 HOVERGEN:HBG095356 InParanoid:Q17RP2 OMA:KAVCRED OrthoDB:EOG71G9TH PhylomeDB:Q17RP2 GenomeRNAi:81789 NextBio:72092 PRO:PR:Q17RP2 Bgee:Q17RP2 CleanEx:HS_TIGD6 Genevestigator:Q17RP2 Uniprot:Q17RP2)

HSP 1 Score: 53.5286 bits (127), Expect = 7.323e-8
Identity = 25/73 (34.25%), Postives = 43/73 (58.90%), Query Frame = 0
Query:   27 GHKRKLLVDRRFKYSTVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLSRNQLS 99
            G +RK +  R   Y  ++K V  W     +KN+L+TG++I +KA   A  +G ++F+ S GWL +F  R+ ++
Sbjct:   64 GPQRKRM--RSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANMLGYDNFQASVGWLNRFRDRHGIA 134          
BLAST of EMLSAG00000004224 vs. GO
Match: - (symbol:TIGD4 "Tigger transposable element-derived protein 4" species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR004875 InterPro:IPR007889 InterPro:IPR009057 Pfam:PF03184 Pfam:PF04218 PROSITE:PS50960 GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689 eggNOG:NOG265486 InterPro:IPR006600 Pfam:PF03221 SMART:SM00674 PROSITE:PS51253 TreeFam:TF101131 EMBL:AC106882 EMBL:BC037869 EMBL:AK058054 RefSeq:NP_663772.1 RefSeq:XP_005262864.1 UniGene:Hs.301243 ProteinModelPortal:Q8IY51 SMR:Q8IY51 BioGrid:128403 PhosphoSite:Q8IY51 DMDM:296452928 PaxDb:Q8IY51 PRIDE:Q8IY51 DNASU:201798 Ensembl:ENST00000304337 GeneID:201798 KEGG:hsa:201798 UCSC:uc003imy.3 CTD:201798 GeneCards:GC04M153690 H-InvDB:HIX0004573 HGNC:HGNC:18335 HPA:HPA035649 neXtProt:NX_Q8IY51 PharmGKB:PA38528 HOGENOM:HOG000154580 HOVERGEN:HBG086852 InParanoid:Q8IY51 OMA:SSKCIAM OrthoDB:EOG7TXKHG PhylomeDB:Q8IY51 GenomeRNAi:201798 NextBio:90202 PRO:PR:Q8IY51 Bgee:Q8IY51 CleanEx:HS_TIGD4 Genevestigator:Q8IY51 Uniprot:Q8IY51)

HSP 1 Score: 46.595 bits (109), Expect = 1.379e-5
Identity = 34/114 (29.82%), Postives = 53/114 (46.49%), Query Frame = 0
Query:    4 KNTRKRIVLTVEQRLKCIKMNEEGHKRKLLVDRRFKYSTVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLS------RNQLSNAEGTEVQPDTI 111
            KN+   I+   ++ L+  +      KRK L  R   Y+ + + ++ W    +  NV + G ++  KA  FA  +G N F+ S GWL +F S      R Q   A G  V P T+
Sbjct:   50 KNSLSSIMKNKDKVLEAFESLRFDPKRKRL--RTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGHNDFKCSNGWLDRFKSRYGLVFRAQPVEATGVPVDPSTV 161          
BLAST of EMLSAG00000004224 vs. GO
Match: - (symbol:Tigd4 "tigger transposable element derived 4" species:10090 "Mus musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150 "biological_process" evidence=ND] InterPro:IPR004875 InterPro:IPR007889 InterPro:IPR009057 Pfam:PF03184 Pfam:PF04218 PROSITE:PS50960 MGI:MGI:2685264 GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689 eggNOG:NOG265486 InterPro:IPR006600 Pfam:PF03221 SMART:SM00674 PROSITE:PS51253 TreeFam:TF101131 GeneTree:ENSGT00740000115260 CTD:201798 HOGENOM:HOG000154580 HOVERGEN:HBG086852 OrthoDB:EOG7TXKHG EMBL:AK081667 RefSeq:NP_997161.1 UniGene:Mm.83086 ProteinModelPortal:Q8BUZ3 SMR:Q8BUZ3 PhosphoSite:Q8BUZ3 PRIDE:Q8BUZ3 Ensembl:ENSMUST00000062623 GeneID:403175 KEGG:mmu:403175 UCSC:uc008pqh.1 InParanoid:Q8BUZ3 OMA:NVFNVKE NextBio:406328 PRO:PR:Q8BUZ3 Bgee:Q8BUZ3 CleanEx:MM_TIGD4 Genevestigator:Q8BUZ3 Uniprot:Q8BUZ3)

HSP 1 Score: 46.2098 bits (108), Expect = 1.826e-5
Identity = 33/114 (28.95%), Postives = 53/114 (46.49%), Query Frame = 0
Query:    4 KNTRKRIVLTVEQRLKCIKMNEEGHKRKLLVDRRFKYSTVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLS------RNQLSNAEGTEVQPDTI 111
            KN+   I+   ++ L+  +      KRK L  R   Y+ + + ++ W    +  NV + G ++  KA  FA  +G N F+ S GWL +F S      R Q   A G  + P T+
Sbjct:   50 KNSLSSIMKNKDKVLEAFESLRFDPKRKRL--RTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGHNDFKCSNGWLDRFKSRYGLVFRAQPVEATGISIDPSTV 161          
BLAST of EMLSAG00000004224 vs. GO
Match: - (symbol:CELE_Y48G1C.6 "Protein Y48G1C.6" species:6239 "Caenorhabditis elegans" [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR009057 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR006600 Pfam:PF03221 SMART:SM00674 PROSITE:PS51253 OrthoDB:EOG7KQ24B EMBL:FO081457 GeneTree:ENSGT00640000092472 RefSeq:NP_490670.1 UniGene:Cel.16421 ProteinModelPortal:Q9N3P2 SMR:Q9N3P2 STRING:6239.Y48G1C.6 EnsemblMetazoa:Y48G1C.6 GeneID:171597 KEGG:cel:CELE_Y48G1C.6 UCSC:Y48G1C.6 CTD:171597 WormBase:Y48G1C.6 eggNOG:NOG293300 InParanoid:Q9N3P2 OMA:HEDGNET NextBio:871949 Uniprot:Q9N3P2)

HSP 1 Score: 45.0542 bits (105), Expect = 2.609e-5
Identity = 23/64 (35.94%), Postives = 36/64 (56.25%), Query Frame = 0
Query:   36 RRFKYSTVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLSRNQLS 99
            R  KY  V+K +I+WV   R +   +T  +I E A   + +   + F+ S+GWL KF+ R+ LS
Sbjct:   79 RPLKYDDVDKELIKWVHDQRKEKQRVTRRIIGETAKKISQN---SDFKASRGWLDKFMCRHNLS 139          
BLAST of EMLSAG00000004224 vs. GO
Match: - (symbol:TIGD4 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR004875 InterPro:IPR007889 InterPro:IPR009057 Pfam:PF03184 Pfam:PF04218 PROSITE:PS50960 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR006600 Pfam:PF03221 SMART:SM00674 PROSITE:PS51253 TreeFam:TF101131 GeneTree:ENSGT00740000115260 OMA:SSKCIAM OrthoDB:EOG7TXKHG EMBL:AAEX03010049 Ensembl:ENSCAFT00000012989 Uniprot:E2R100)

HSP 1 Score: 43.8986 bits (102), Expect = 8.957e-5
Identity = 25/70 (35.71%), Postives = 37/70 (52.86%), Query Frame = 0
Query:   29 KRKLLVDRRFKYSTVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLSRNQL 98
            KRK L  R   Y+ + + ++ W    +  NV + G ++  KA  FA  +G N F+ S GWL +F SR  L
Sbjct:   75 KRKRL--RTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGHNDFKCSNGWLDRFKSRYGL 142          
BLAST of EMLSAG00000004224 vs. GO
Match: - (symbol:Tigd4 "Protein Tigd4" species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR004875 InterPro:IPR007889 InterPro:IPR009057 Pfam:PF03184 Pfam:PF04218 PROSITE:PS50960 RGD:1305780 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR006600 Pfam:PF03221 SMART:SM00674 PROSITE:PS51253 TreeFam:TF101131 GeneTree:ENSGT00740000115260 OrthoDB:EOG7TXKHG OMA:NVFNVKE EMBL:AABR06018609 RefSeq:XP_006224221.1 RefSeq:XP_006232614.1 Ensembl:ENSRNOT00000014409 GeneID:102550932 UCSC:RGD:1305780 NextBio:33728279 PRO:PR:D4AC64 Uniprot:D4AC64)

HSP 1 Score: 43.8986 bits (102), Expect = 1.045e-4
Identity = 32/114 (28.07%), Postives = 51/114 (44.74%), Query Frame = 0
Query:    4 KNTRKRIVLTVEQRLKCIKMNEEGHKRKLLVDRRFKYSTVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLS------RNQLSNAEGTEVQPDTI 111
            KN+   I+   ++ L+  +      KRK L  R   Y+ + + ++ W    +  NV + G ++  KA  FA  +G N F+ S GWL +F S      R Q   A G    P  +
Sbjct:   50 KNSLSSIMKNKDKVLEAFESLRFDPKRKRL--RTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGHNDFKCSNGWLDRFKSRYGLVFRAQPVEATGVSTDPSAV 161          
BLAST of EMLSAG00000004224 vs. GO
Match: - (symbol:Tigd4 "tigger transposable element derived 4" species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR004875 InterPro:IPR007889 InterPro:IPR009057 Pfam:PF03184 Pfam:PF04218 PROSITE:PS50960 RGD:1305780 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR006600 Pfam:PF03221 SMART:SM00674 PROSITE:PS51253 TreeFam:TF101131 GeneTree:ENSGT00740000115260 OrthoDB:EOG7TXKHG OMA:NVFNVKE EMBL:AABR06018609 RefSeq:XP_006224221.1 RefSeq:XP_006232614.1 Ensembl:ENSRNOT00000014409 GeneID:102550932 UCSC:RGD:1305780 NextBio:33728279 PRO:PR:D4AC64 Uniprot:D4AC64)

HSP 1 Score: 43.8986 bits (102), Expect = 1.045e-4
Identity = 32/114 (28.07%), Postives = 51/114 (44.74%), Query Frame = 0
Query:    4 KNTRKRIVLTVEQRLKCIKMNEEGHKRKLLVDRRFKYSTVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLS------RNQLSNAEGTEVQPDTI 111
            KN+   I+   ++ L+  +      KRK L  R   Y+ + + ++ W    +  NV + G ++  KA  FA  +G N F+ S GWL +F S      R Q   A G    P  +
Sbjct:   50 KNSLSSIMKNKDKVLEAFESLRFDPKRKRL--RTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGHNDFKCSNGWLDRFKSRYGLVFRAQPVEATGVSTDPSAV 161          
BLAST of EMLSAG00000004224 vs. GO
Match: - (symbol:TIGD4 "Uncharacterized protein" species:9913 "Bos taurus" [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR004875 InterPro:IPR007889 InterPro:IPR009057 Pfam:PF03184 Pfam:PF04218 PROSITE:PS50960 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR006600 Pfam:PF03221 SMART:SM00674 PROSITE:PS51253 TreeFam:TF101131 GeneTree:ENSGT00740000115260 CTD:201798 OrthoDB:EOG7TXKHG OMA:NVFNVKE EMBL:DAAA02044164 RefSeq:XP_005217532.1 Ensembl:ENSBTAT00000012071 GeneID:101907287 KEGG:bta:101907287 NextBio:20877578 Uniprot:F1MHM8)

HSP 1 Score: 43.1282 bits (100), Expect = 1.694e-4
Identity = 32/114 (28.07%), Postives = 51/114 (44.74%), Query Frame = 0
Query:    4 KNTRKRIVLTVEQRLKCIKMNEEGHKRKLLVDRRFKYSTVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLS------RNQLSNAEGTEVQPDTI 111
            KN+   I+   ++ L+  +      KRK L  R   Y+ + + ++ W    +  NV + G ++  KA  FA  +G N F+ S GWL +F S      R Q   A G    P  +
Sbjct:   50 KNSLSSIMKNKDKVLEAFESLRFDPKRKRL--RTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGHNDFKCSNGWLDRFKSRYGLVFRAQPVEATGVSADPSAV 161          
BLAST of EMLSAG00000004224 vs. GO
Match: - (symbol:cag "cag" species:7227 "Drosophila melanogaster" [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR007889 InterPro:IPR009057 Pfam:PF04218 PROSITE:PS50960 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR006600 Pfam:PF03221 SMART:SM00674 PROSITE:PS51253 OrthoDB:EOG7KQ24B eggNOG:NOG241149 EMBL:U83412 ProteinModelPortal:P91673 SMR:P91673 STRING:7227.FBpp0087334 PRIDE:P91673 FlyBase:FBgn0017414 InParanoid:P91673 Bgee:P91673 Uniprot:P91673)

HSP 1 Score: 41.9726 bits (97), Expect = 2.560e-4
Identity = 14/52 (26.92%), Postives = 33/52 (63.46%), Query Frame = 0
Query:   41 STVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKF 92
            + +++   +W    R++N+ ++G ++ +KA   A+ +G ++F  S GWL+K+
Sbjct:   80 AQIDEMCFDWFSRVRTENIPISGEMVRKKAKQLAVELGHSNFSTSSGWLEKW 131          
BLAST of EMLSAG00000004224 vs. L. salmonis peptides
Match: EMLSAP00000004224 (pep:novel supercontig:LSalAtl2s:LSalAtl2s222:1022886:1023397:-1 gene:EMLSAG00000004224 transcript:EMLSAT00000004224 description:"snap_masked-LSalAtl2s222-processed-gene-10.24")

HSP 1 Score: 229.565 bits (584), Expect = 1.435e-78
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0
Query:    1 MSLKNTRKRIVLTVEQRLKCIKMNEEGHKRKLLVDRRFKYSTVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLSRNQLSNAEGTEVQPDTIEE 113
            MSLKNTRKRIVLTVEQRLKCIKMNEEGHKRKLLVDRRFKYSTVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLSRNQLSNAEGTEVQPDTIEE
Sbjct:    1 MSLKNTRKRIVLTVEQRLKCIKMNEEGHKRKLLVDRRFKYSTVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLSRNQLSNAEGTEVQPDTIEE 113          
BLAST of EMLSAG00000004224 vs. L. salmonis peptides
Match: EMLSAP00000003162 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1766:16779:17365:-1 gene:EMLSAG00000003162 transcript:EMLSAT00000003162 description:"augustus_masked-LSalAtl2s1766-processed-gene-0.0")

HSP 1 Score: 164.081 bits (414), Expect = 1.621e-52
Identity = 86/117 (73.50%), Postives = 93/117 (79.49%), Query Frame = 0
Query:    1 MSLKNTRKRIVLTVEQRLKCIKMNEEGHKRKLLVDRRFKYSTVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLSRNQLSNA----EGTEVQPDTIEE 113
            MSLKNTRK IVLTVEQRLKCIK+NEEGHKRKLLVDRR KYS  NKRVIEW MA RSK   LTG LI EKAAT ALSMGLN F+VS+GW  K +S NQ+S A    E  EVQP+TI+E
Sbjct:    1 MSLKNTRKSIVLTVEQRLKCIKLNEEGHKRKLLVDRRSKYSAGNKRVIEWCMACRSKFFDLTGPLIREKAATLALSMGLNDFKVSRGWRXKIISSNQISTAVMCGEWVEVQPETIQE 117          
BLAST of EMLSAG00000004224 vs. L. salmonis peptides
Match: EMLSAP00000007375 (pep:novel supercontig:LSalAtl2s:LSalAtl2s41:230038:235603:-1 gene:EMLSAG00000007375 transcript:EMLSAT00000007375 description:"snap_masked-LSalAtl2s41-processed-gene-2.3")

HSP 1 Score: 125.946 bits (315), Expect = 9.144e-36
Identity = 65/89 (73.03%), Postives = 68/89 (76.40%), Query Frame = 0
Query:   29 KRKLLVDRRFKYSTVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLSRNQLSNA----EGTEVQPDTIEE 113
            KRKLLVDR  KYS  NKRVIEW MA RSK   LTG LI  KAATFALSMGLN FE SQGWLQKF+  NQLS+A    EG EVQP+TIEE
Sbjct:   52 KRKLLVDRHSKYSAANKRVIEWFMACRSKKFPLTGPLIRGKAATFALSMGLNDFEASQGWLQKFIYINQLSSAVLCSEGAEVQPETIEE 140          
BLAST of EMLSAG00000004224 vs. L. salmonis peptides
Match: EMLSAP00000003064 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1737:28892:29363:1 gene:EMLSAG00000003064 transcript:EMLSAT00000003064 description:"maker-LSalAtl2s1737-snap-gene-0.10")

HSP 1 Score: 64.3142 bits (155), Expect = 4.949e-14
Identity = 31/50 (62.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:   52 MAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLSRNQLSNA 101
            M  RSK + L G +I EKAATF LS+ LN F+ SQGWL  F+SR QLSNA
Sbjct:    1 MGCRSKKIPLIGPIIREKAATFTLSICLNEFKASQGWLPIFISRIQLSNA 50          
BLAST of EMLSAG00000004224 vs. SwissProt
Match: gi|124053415|sp|Q17RP2.2|TIGD6_HUMAN (RecName: Full=Tigger transposable element-derived protein 6)

HSP 1 Score: 53.5286 bits (127), Expect = 2.329e-8
Identity = 25/73 (34.25%), Postives = 43/73 (58.90%), Query Frame = 0
Query:   27 GHKRKLLVDRRFKYSTVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLSRNQLS 99
            G +RK +  R   Y  ++K V  W     +KN+L+TG++I +KA   A  +G ++F+ S GWL +F  R+ ++
Sbjct:   64 GPQRKRM--RSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANMLGYDNFQASVGWLNRFRDRHGIA 134          
BLAST of EMLSAG00000004224 vs. Select Arthropod Genomes
Match: gb|KFM77611.1| (Tigger transposable element-derived protein 6, partial [Stegodyphus mimosarum])

HSP 1 Score: 49.6766 bits (117), Expect = 2.169e-7
Identity = 23/64 (35.94%), Postives = 36/64 (56.25%), Query Frame = 0
Query:   36 RRFKYSTVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLSRNQLS 99
            R  K+  + + ++ W    RS N+ + G ++ E+A  FA  + +  F+ S GWLQKF  RN LS
Sbjct:   69 RESKHPNLERALLVWFRKMRSLNIPIDGNVLKEQAHFFASKLNIKDFKASDGWLQKFKFRNGLS 132          
BLAST of EMLSAG00000004224 vs. Select Arthropod Genomes
Match: gb|KFM72755.1| (Tigger transposable element-derived protein 6, partial [Stegodyphus mimosarum])

HSP 1 Score: 49.6766 bits (117), Expect = 2.431e-7
Identity = 23/64 (35.94%), Postives = 36/64 (56.25%), Query Frame = 0
Query:   36 RRFKYSTVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLSRNQLS 99
            R  K+  + + ++ W    RS N+ + G ++ E+A  FA  + +  F+ S GWLQKF  RN LS
Sbjct:   69 RESKHPNLERALLVWFRKMRSLNIPIDGNVLKEQAHFFASKLNIKDFKASDGWLQKFKFRNGLS 132          
BLAST of EMLSAG00000004224 vs. Select Arthropod Genomes
Match: gb|KFM77786.1| (Tigger transposable element-derived protein 6, partial [Stegodyphus mimosarum])

HSP 1 Score: 49.6766 bits (117), Expect = 2.442e-7
Identity = 23/64 (35.94%), Postives = 36/64 (56.25%), Query Frame = 0
Query:   36 RRFKYSTVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLSRNQLS 99
            R  K+  + + ++ W    RS N+ + G ++ E+A  FA  + +  F+ S GWLQKF  RN LS
Sbjct:   69 RESKHPNLERALLVWFRKMRSLNIPIDGNVLKEQAHFFASKLNIKDFKASDGWLQKFKFRNGLS 132          
BLAST of EMLSAG00000004224 vs. Select Arthropod Genomes
Match: gb|KFM63550.1| (Tigger transposable element-derived protein 6, partial [Stegodyphus mimosarum])

HSP 1 Score: 49.6766 bits (117), Expect = 2.749e-7
Identity = 23/64 (35.94%), Postives = 36/64 (56.25%), Query Frame = 0
Query:   36 RRFKYSTVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLSRNQLS 99
            R  K+  + + ++ W    RS N+ + G ++ E+A  FA  + +  F+ S GWLQKF  RN LS
Sbjct:   69 RESKHPNLERALLVWFRKMRSLNIPIDGNVLKEQAHFFASKLNIKDFKASDGWLQKFKFRNGLS 132          
BLAST of EMLSAG00000004224 vs. Select Arthropod Genomes
Match: gb|KFM68387.1| (Tigger transposable element-derived protein 6, partial [Stegodyphus mimosarum])

HSP 1 Score: 49.2914 bits (116), Expect = 3.736e-7
Identity = 23/64 (35.94%), Postives = 36/64 (56.25%), Query Frame = 0
Query:   36 RRFKYSTVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLSRNQLS 99
            R  K+  + + ++ W    RS N+ + G ++ E+A  FA  + +  F+ S GWLQKF  RN LS
Sbjct:   69 RESKHPNLERALLVWFRKMRSLNIPIDGNVLKEQAHFFASKLNIKDFKASDGWLQKFKFRNGLS 132          
BLAST of EMLSAG00000004224 vs. Select Arthropod Genomes
Match: gb|KFM61198.1| (Major centromere autoantigen B, partial [Stegodyphus mimosarum])

HSP 1 Score: 47.7506 bits (112), Expect = 6.110e-7
Identity = 19/59 (32.20%), Postives = 33/59 (55.93%), Query Frame = 0
Query:   40 YSTVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLSRNQL 98
            Y  +N   + WV   R++N+ + G  + E A+++A  + +  F  S GWL+KF  RN +
Sbjct:  108 YREINDLTLAWVEWARTQNISINGRYLREIASSYAKHLKIEKFSASTGWLEKFCRRNNI 166          
BLAST of EMLSAG00000004224 vs. nr
Match: gi|1129972500|ref|XP_019744066.1| (PREDICTED: uncharacterized protein LOC109526924 isoform X2 [Hippocampus comes])

HSP 1 Score: 98.2117 bits (243), Expect = 5.838e-22
Identity = 55/136 (40.44%), Postives = 79/136 (58.09%), Query Frame = 0
Query:    3 LKNTRKRIVLTVEQRLKCIKMNEEGHK-------------------------------------RKLLVDRRFKYSTVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLSRNQLSNA 101
            + + R+R VLTVE+R+KCI+++E G K                                     RKLLV R+ KYS +N+RV++W  + R++++ LTG  I EKA++ A S+G+  FE SQGWLQKF++RNQLSNA
Sbjct:  274 MASKRRRTVLTVEERVKCIRLSEAGFKVRKIQEILRVGKTQIYETLRNKETILARYDSGRLPGQRKLLVVRQTKYSGINERVLDWFNSCRAQSLPLTGPRIREKASSIARSLGIEDFEASQGWLQKFIARNQLSNA 409          
BLAST of EMLSAG00000004224 vs. nr
Match: gi|1129943847|ref|XP_019731246.1| (PREDICTED: uncharacterized protein LOC109519268 isoform X1 [Hippocampus comes])

HSP 1 Score: 70.8626 bits (172), Expect = 2.072e-12
Identity = 42/137 (30.66%), Postives = 62/137 (45.26%), Query Frame = 0
Query:    2 SLKNTRKRIVLTVEQRLKCIKMNEEG-------------------------------------HKRKLLVDRRFKYSTVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLSRNQLSNA 101
            S +  +KR  LT+E R+K I+M + G                                      KRK+L   R KY  +N+   EW    R+ N ++TG++I E+A   AL  G+ HFE S GWL+ F+ R+ +S A
Sbjct:   12 SSQGVKKRKALTLEDRIKVIRMKDRGSKVKDILQKIDAGQTQIYAILKDRENLLEIWNSGKMNRKRKILTAGRQKYPEINRETWEWFTKKRATNNVITGSMIQEQARIIALRKGITHFEGSNGWLRTFIQRHSISRA 148          
BLAST of EMLSAG00000004224 vs. nr
Match: gi|1129943849|ref|XP_019731247.1| (PREDICTED: uncharacterized protein LOC109519268 isoform X2 [Hippocampus comes])

HSP 1 Score: 69.3218 bits (168), Expect = 8.984e-12
Identity = 34/80 (42.50%), Postives = 48/80 (60.00%), Query Frame = 0
Query:   22 KMNEEGHKRKLLVDRRFKYSTVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLSRNQLSNA 101
            KMN    KRK+L   R KY  +N+   EW    R+ N ++TG++I E+A   AL  G+ HFE S GWL+ F+ R+ +S A
Sbjct:   58 KMN---RKRKILTAGRQKYPEINRETWEWFTKKRATNNVITGSMIQEQARIIALRKGITHFEGSNGWLRTFIQRHSISRA 134          
BLAST of EMLSAG00000004224 vs. nr
Match: gi|1009582233|ref|XP_015922382.1| (PREDICTED: tigger transposable element-derived protein 4-like [Parasteatoda tepidariorum])

HSP 1 Score: 67.0106 bits (162), Expect = 8.125e-11
Identity = 34/93 (36.56%), Postives = 55/93 (59.14%), Query Frame = 0
Query:    6 TRKRIVLTVEQRLKCIKMNEEGHKRKLLVDRRFKYSTVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLSRNQL 98
            ++ +I   V+ +   +K  E+   R +   R  K+  +N+ VI+W    R+KNV L+GTL+ EKA   A S+G+ +F  S GWL KF +RN++
Sbjct:   39 SKNQINNVVKNKESLLKEYEDFKNRGIKRKRNEKFCDINEAVIQWFRCARTKNVPLSGTLVKEKAIQIAESLGVENFCASNGWLNKFCNRNKI 131          
BLAST of EMLSAG00000004224 vs. nr
Match: gi|358337410|dbj|GAA55772.1| (tigger transposable element-derived protein 6 [Clonorchis sinensis])

HSP 1 Score: 67.0106 bits (162), Expect = 9.533e-11
Identity = 37/117 (31.62%), Postives = 64/117 (54.70%), Query Frame = 0
Query:    2 SLKNTRKRIVLTVEQRLKCIKMNEEG--HKRKLLVDRRFKYSTVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLSRNQL---SNAEGTEVQPDTIEE 113
            SL   R +I L + ++    +  E G    RKLL +R+  Y  +++++ EW ++ RS+NV  +G L+ +KA   A S+G+  F  S GWL KF  R  +   S  E  ++ P+++ +
Sbjct:   23 SLGTGRMQIALLIRKKEDIRRQWEAGVCASRKLLHERKVAYPELDEKLYEWFLSARSRNVPTSGRLLQKKAIELAKSLGIEGFCASNGWLDKFQKRKNITGVSVGESRDLAPESVSD 139          
BLAST of EMLSAG00000004224 vs. nr
Match: gi|684394561|ref|XP_009170941.1| (hypothetical protein T265_14224 [Opisthorchis viverrini] >gi|663049254|gb|KER25304.1| hypothetical protein T265_14224 [Opisthorchis viverrini])

HSP 1 Score: 65.0846 bits (157), Expect = 5.383e-10
Identity = 36/117 (30.77%), Postives = 64/117 (54.70%), Query Frame = 0
Query:    2 SLKNTRKRIVLTVEQRLKCIKMNEEG--HKRKLLVDRRFKYSTVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLSRNQL---SNAEGTEVQPDTIEE 113
            SL   R +I L + ++    +  E G    RKLL +R+  Y  +++++ EW ++ RS+NV  +G L+ +KA   A ++G+  F  S GWL KF  R  +   S  E  ++ P+++ +
Sbjct:   32 SLGTGRMQIALLIRKKEDIRRQWEAGVCASRKLLHERKVAYPELDEKLYEWFLSARSRNVPTSGRLLQKKAIELAKALGIEGFCASNGWLDKFQKRKNITGVSVGESRDLAPESVSD 148          
BLAST of EMLSAG00000004224 vs. nr
Match: gi|926620796|ref|XP_013775709.1| (PREDICTED: tigger transposable element-derived protein 6-like [Limulus polyphemus])

HSP 1 Score: 63.929 bits (154), Expect = 7.429e-10
Identity = 34/117 (29.06%), Postives = 62/117 (52.99%), Query Frame = 0
Query:    1 MSLKNTRKRIVLTVEQRLKCIKMNEEGHKRKLLVDRRFKYSTVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLSRNQLS----NAEGTEVQPDTIEE 113
            M    T+ + ++  +Q++K +  +      K+   R+     +N++V EW    RSK++ +TG LI EKA   ++ +GL+ F  S GWL +F  R+ +S    + EG  V  +T+ +
Sbjct:   33 MQCGKTQIQTIVADKQKIKALWESGSNPAMKVTKVRKTANHELNEQVFEWFCNARSKDIPITGKLIQEKAVMLSVELGLDDFSASNGWLDRFQKRHNISCSVLSGEGASVNEETVND 149          
BLAST of EMLSAG00000004224 vs. nr
Match: gi|926620426|ref|XP_013775505.1| (PREDICTED: jerky protein homolog-like [Limulus polyphemus])

HSP 1 Score: 61.6178 bits (148), Expect = 2.034e-9
Identity = 34/113 (30.09%), Postives = 61/113 (53.98%), Query Frame = 0
Query:    1 MSLKNTRKRIVLTVEQRLKCIKMNEEGHKRKLLVDRRFKYSTVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLSRNQLSNAEGTEVQPDTIEE 113
            M    T+ + ++  +Q++K +  +      K+   R+     +N++V EW    +SKN+ +T  LI EKA   ++ +GL+ F V+ GWL +F  R+ LS  EG  V  +T+ +
Sbjct:   33 MQCGKTQIQTIIANKQKIKALWESGSNAAMKVTKVRKTANHELNEQVFEWFCNGQSKNIPITSKLIQEKAVMLSVELGLDDFSVTNGWLDRFQKRHNLS-GEGALVNEETVND 144          
BLAST of EMLSAG00000004224 vs. nr
Match: gi|926607756|ref|XP_013774244.1| (PREDICTED: tigger transposable element-derived protein 6-like [Limulus polyphemus])

HSP 1 Score: 62.7734 bits (151), Expect = 2.281e-9
Identity = 29/75 (38.67%), Postives = 44/75 (58.67%), Query Frame = 0
Query:   43 VNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLSRNQLS----NAEGTEVQPDTIEE 113
            +N++V EW    RSKN+ +TG LI EKA   ++ +GL+ F  S GWL +F  R  +S    + EG  V  +T+ +
Sbjct:   50 LNEQVFEWFCNARSKNIPITGKLIQEKAVMLSVELGLDDFSASNGWLDRFQKRRNISCSVLSGEGASVNEETVND 124          
BLAST of EMLSAG00000004224 vs. nr
Match: gi|1069787787|ref|XP_018319168.1| (PREDICTED: tigger transposable element-derived protein 4-like [Agrilus planipennis])

HSP 1 Score: 60.4622 bits (145), Expect = 7.875e-9
Identity = 25/64 (39.06%), Postives = 43/64 (67.19%), Query Frame = 0
Query:   36 RRFKYSTVNKRVIEWVMAXRSKNVLLTGTLIMEKAATFALSMGLNHFEVSQGWLQKFLSRNQLS 99
            R+ K+  +++ ++EW+   R KNVL+TG ++  KA  FA  +G+  F+ S+GWL KF  R++L+
Sbjct:   65 RKPKFEDLDRAMVEWLETQRIKNVLITGPILKSKAKMFAEQLGIKDFKASEGWLGKFKHRHELN 128          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000004224 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 10
Match NameE-valueIdentityDescription
-7.215e-834.25symbol:TIGD6 "Uncharacterized protein" species:961... [more]
-7.323e-834.25symbol:TIGD6 "Tigger transposable element-derived ... [more]
-1.379e-529.82symbol:TIGD4 "Tigger transposable element-derived ... [more]
-1.826e-528.95symbol:Tigd4 "tigger transposable element derived ... [more]
-2.609e-535.94symbol:CELE_Y48G1C.6 "Protein Y48G1C.6" species:62... [more]
-8.957e-535.71symbol:TIGD4 "Uncharacterized protein" species:961... [more]
-1.045e-428.07symbol:Tigd4 "Protein Tigd4" species:10116 "Rattus... [more]
-1.045e-428.07symbol:Tigd4 "tigger transposable element derived ... [more]
-1.694e-428.07symbol:TIGD4 "Uncharacterized protein" species:991... [more]
-2.560e-426.92symbol:cag "cag" species:7227 "Drosophila melanoga... [more]
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BLAST of EMLSAG00000004224 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000004224 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 4
Match NameE-valueIdentityDescription
EMLSAP000000042241.435e-78100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s222:10228... [more]
EMLSAP000000031621.621e-5273.50pep:novel supercontig:LSalAtl2s:LSalAtl2s1766:1677... [more]
EMLSAP000000073759.144e-3673.03pep:novel supercontig:LSalAtl2s:LSalAtl2s41:230038... [more]
EMLSAP000000030644.949e-1462.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1737:2889... [more]
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BLAST of EMLSAG00000004224 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
gi|124053415|sp|Q17RP2.2|TIGD6_HUMAN2.329e-834.25RecName: Full=Tigger transposable element-derived ... [more]
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BLAST of EMLSAG00000004224 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 6
Match NameE-valueIdentityDescription
gb|KFM77611.1|2.169e-735.94Tigger transposable element-derived protein 6, par... [more]
gb|KFM72755.1|2.431e-735.94Tigger transposable element-derived protein 6, par... [more]
gb|KFM77786.1|2.442e-735.94Tigger transposable element-derived protein 6, par... [more]
gb|KFM63550.1|2.749e-735.94Tigger transposable element-derived protein 6, par... [more]
gb|KFM68387.1|3.736e-735.94Tigger transposable element-derived protein 6, par... [more]
gb|KFM61198.1|6.110e-732.20Major centromere autoantigen B, partial [Stegodyph... [more]
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BLAST of EMLSAG00000004224 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 24
Match NameE-valueIdentityDescription
gi|1129972500|ref|XP_019744066.1|5.838e-2240.44PREDICTED: uncharacterized protein LOC109526924 is... [more]
gi|1129943847|ref|XP_019731246.1|2.072e-1230.66PREDICTED: uncharacterized protein LOC109519268 is... [more]
gi|1129943849|ref|XP_019731247.1|8.984e-1242.50PREDICTED: uncharacterized protein LOC109519268 is... [more]
gi|1009582233|ref|XP_015922382.1|8.125e-1136.56PREDICTED: tigger transposable element-derived pro... [more]
gi|358337410|dbj|GAA55772.1|9.533e-1131.62tigger transposable element-derived protein 6 [Clo... [more]
gi|684394561|ref|XP_009170941.1|5.383e-1030.77hypothetical protein T265_14224 [Opisthorchis vive... [more]
gi|926620796|ref|XP_013775709.1|7.429e-1029.06PREDICTED: tigger transposable element-derived pro... [more]
gi|926620426|ref|XP_013775505.1|2.034e-930.09PREDICTED: jerky protein homolog-like [Limulus pol... [more]
gi|926607756|ref|XP_013774244.1|2.281e-938.67PREDICTED: tigger transposable element-derived pro... [more]
gi|1069787787|ref|XP_018319168.1|7.875e-939.06PREDICTED: tigger transposable element-derived pro... [more]

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BLAST of EMLSAG00000004224 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s222supercontigLSalAtl2s222:1022886..1023397 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap_masked-LSalAtl2s222-processed-gene-10.24
Biotypeprotein_coding
EvidenceIEA
NoteTigger transposable element-derived protein 6
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000004224 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000004224EMLSAT00000004224-700071Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s222:1022886..1023397-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000004224-686990 ID=EMLSAG00000004224-686990|Name=EMLSAG00000004224|organism=Lepeophtheirus salmonis|type=gene|length=512bp|location=Sequence derived from alignment at LSalAtl2s222:1022886..1023397- (Lepeophtheirus salmonis)
ATGTCCTTAAAGAATACACGAAAAAGGATTGTTTTGACGGTGGAACAGCG ATTGAAGTGCATAAAAATGAATGAAGAGGGTCACAAAGTTTGTACAGCAC TCAATACATAGGTAGTTTAATAAAGAATACGAATGTATTTAATATTATCT TATGCTACAAAGATTCAATAGATTCTTGGTGTCGGTAAAACTACGAAATG CTGAAAAATAAAGAGAAAATCCTAAGTGATTATATTTCTGGTACTCTATC TGGTTAGCGTAAACTTCTCGTGGATCGTCGTTTCAAATACTCTACCGTTA ATAAAAGAGTAATAGAATGGGTTATGGCTTKTCGTTCAAAAAATGTCCTA CTAACTGGAACTCTCATCATGGAAAAGGCAGCTACTTTCGCTTTGTCTAT GGGTTTGAATCACTTTGAAGTGTCTCAGGGATGGCTGCAGAAATTTCTCT CAAGGAATCAACTCAGCAATGCTGAAGGGACGGAAGTTCAACCAGATACT ATTGAAGAATGA
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