EMLSAT00000004296, EMLSAT00000004296-700143 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004296
Unique NameEMLSAT00000004296-700143
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s225supercontigLSalAtl2s225:231721..234409 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004296 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004296EMLSAG00000004296-687062Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000018667EMLSAE00000018667-727595Lepeophtheirus salmonisexon
EMLSAE00000018668EMLSAE00000018668-727596Lepeophtheirus salmonisexon
EMLSAE00000018669EMLSAE00000018669-727597Lepeophtheirus salmonisexon
EMLSAE00000018670EMLSAE00000018670-727598Lepeophtheirus salmonisexon
EMLSAE00000018671EMLSAE00000018671-727599Lepeophtheirus salmonisexon
EMLSAE00000018672EMLSAE00000018672-727600Lepeophtheirus salmonisexon
EMLSAE00000018673EMLSAE00000018673-727601Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774969auto774969Lepeophtheirus salmonispolypeptide
EMLSAP00000004296EMLSAP00000004296Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004296

>EMLSAP00000004296 ID=EMLSAP00000004296|Name=EMLSAP00000004296|organism=Lepeophtheirus salmonis|type=polypeptide|length=647bp
MSDVDPMFLRVHSKDLFEHIAQEVGECLESGLYTDLIIRCKEGQTLHAHR
LVLSAISPYFKMLLLNQDANVGDINSIELPDIDFIQVQRLLEVVYNGSVE
ATMDEISDLILFAHSLYIKIPVSKDIIELLDLKLPELRPLPSTKRDSQEL
ENSSDAKIKKLESPGEREYICPICNSTYTNFGNFGQHMKRHDNEELFQHV
VEERMARINEMITSCFDPITSQYSCEICKSTYSHPGNFKQHLLKHEREAN
GLGKNKNRNSMQGSNSNSHLNNVLHSAFADRVDHGDRNLDANIKMYECEQ
CGRVFKHPGNFKQHMSSHFRAAAAXXATSAXSSFKKVKLPDLPKIPVPQS
SISGVSPSPAPPKSILNSRSHFLNPRPHFLNSSGQVLDPPPCSVMTRWRC
NHCPQPTFFQSREKLRQHVAANHRGPNANHARKHTPLPANLIPSVPLSPP
SITANYKECEICHQLFDTESQLSQHMSTHVTIKEEPTNSLSSELTYHCDE
PGCTQAFSKEIWVRKHKETFHEISPEKLNGSEGGFFECRICKKVFSKSNK
LSAHMRVHRYDAPQNHYRYPCDICGKRFTRPQHVNRHKLLHTGERIHKCK
DCNASFAREDKLNYHIMNECEYSVVNMENIEYELDDGELMAEETITS
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mRNA from alignment at LSalAtl2s225:231721..234409-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004296-700143 ID=EMLSAT00000004296-700143|Name=EMLSAT00000004296|organism=Lepeophtheirus salmonis|type=mRNA|length=2689bp|location=Sequence derived from alignment at LSalAtl2s225:231721..234409- (Lepeophtheirus salmonis)
ATGTCGGATGTGGATCCTATGTTTCTAAGGGTTCACTCCAAGGACTTGTT
TGAACATATCGCTCAAGAAGTTGGAGAATGTCTCGAATCTGGCCTCTACA
CGGACCTCATCATTCGTTGCAAGGAGGGACAAACGCTTCATGCACATCGA
TTAGTTCTCAGTGCCATCAGTCCTTACTTTAAAATGGTATTTATTTTTCC
ATTTTCCTTATTTAAAGTGTTGTATTCCTTGACTCTTCGCCCTTGTGGAC
GTGGCATTAGTATTTTGTACTGTCCTTTTCAATAGTAAGAAATAATTCAT
TCAGTTCCTTGCATATGTATTCTACATCCAACATATTCATTATCATTTGG
AATAATATATACTTTAATATATTGCTCATCATAATTGATGAATAATTGAG
GCAAAATATAGATAAGATATGCAGTGATTAAAAGGATTTATTTTAAAAGT
AACAAGTGTATAAGTGTAAGCCTATAATTATATTCATTATTCGTCTCTAT
TGTAGCTTTTATTAAATCAAGATGCAAATGTTGGAGATATAAATAGTATA
GAATTGCCGGATATTGATTTTATTCAAGTACAAAGGCTTCTAGAAGTTGT
TTACAATGGATCTGTTGAAGCCACCATGGATGAAATTAGTGACCTTATTT
TGTTTGCACACTCTTTGTACATTAAAATTCCCGTTTCAAAAGATATAATT
GAGCTTCTGGATTTAAAACTACCTGAATTGAGACCACTTCCATCCACCAA
AAGGGATTCTCAGGAATTGGAAAACAGTTCAGATGCCAAAATAAAAAAGT
TAGGTAAGTTAGTTTCCTATCACTTGAAAGCTAAAATAATTATCCCTGTT
TCCCTTTATAATAATAGAATCTCCAGGAGAACGAGAATATATTTGTCCCA
TCTGTAATTCAACTTACACAAATTTTGGAAACTTTGGTCAGCACATGAAA
CGGCATGATAATGAGGAACTATTTCAACATGTAGTGGAGGAACGAATGGC
TCGAATCAATGAAATGATCACCTCTTGTTTTGGTGAGGATTTTTTAAGAA
ACTTGAAAATATGAAATAATTGTTTCTTAATGTCTACAATTTTATTTATA
GATCCTATCACATCCCAATATAGTTGTGAGATTTGTAAAAGTACTTATTC
GCACCCCGGAAACTTTAAGCAACATTTATTAAAGCATGAACGAGAGGCCA
ATGGTCTTGGAAAGAACAAAAATCGGAATTCAATGCAGGGGTCTAATAGT
AATAGTCATCTCAATAACGTTCTTCATTCTGCATTTGCTGATCGTGTAGA
TCATGGTGACCGAAATCTAGACGCAAATATTAAAATGTATGAGTGTGAAC
AATGTGGACGAGTCTTTAAGCATCCTGGAAACTTTAAACAACATATGTCA
AGTCATTTTCGTGCTGCCGCGGCTGSTGSAGCTACTTCTGCGYTCAGCAG
TTTTAAAAAAGTGAAACTACCTGATTTGCCCAAGATTCCAGTACCTCAAT
CATCTATTTCTGGCGTTTCCCCATCTCCAGCTCCGCCCAAGTCTATTTTG
AATTCTCGTTCGCACTTTTTGAATCCTCGTCCTCACTTTTTGAATTCTTC
AGGGCAAGTTTTGGATCCTCCTCCTTGCTCTGTCATGACTAGATGGAGGT
GTAATCATTGTCCCCAACCCACGTTCTTTCAGAGTCGAGAAAAATTAAGA
CAGCATGTTGCAGCTAATCATCGAGGACCTAATGCTAATCATGCAAGGAA
ACATACGCCTTTGCCTGCTAATCTCATTCCAAGTGTTCCACTCTCGCCCC
CGTCAATTACTGCTAACTACAAGGAATGCGAAATTTGCCATCAACTTTTT
GACACTGAAAGTAAGATTTATGGAATTTTTTTTAAAAACAACTATTACTT
ATTTGATATATGTATATACTTATAGGTCAGCTCTCACAACATATGTCCAC
TCATGTTACAATTAAAGAAGAACCTACGAATTCTTTGTCTTCAGAACTTA
CATATCATTGCGATGAACCTGGATGTACTCAAGCATTTAGTAAGGAAATT
TGGGTTCGTAAACACAAAGAAACATTCCACGAAATTTCACCTGAAAAACT
CAATGGATCTGAAGGAGGCTTTTTTGAATGCAGAATTTGTAAAAAAGTGT
TTTCCAAGAGCAACAAGCTTAGTGCACATATGAGGGTTCATAGATATGAG
TAAGTATTTGATTAATATATTTTTACTTTCATTAATGAATAAATCCATTT
GCATATCACATATGCTATTAAATAAACTATGCATGCATAAACTATTAAAT
CATTTAATATACGTAATATATAAGTGATATTTTGAACATTTTTACTCAAT
TTGTATTTCAAGTGCTCCGCAAAATCATTATCGATACCCTTGTGACATTT
GTGGAAAACGTTTCACGAGGCCTCAGCACGTCAATCGACACAAACTTCTT
CATACGGGTGAAAGAATACACAAATGCAAGGACTGCAATGCATCATTTGC
TAGAGAGGATAAATTGAATTATCAGTAATTATTTAGATATATTTCTGAAG
AAACCCCCTTTTAATTAATGCATTATCTTTATTTTCTAGCATTATGAATG
AGTGTGAATATTCTGTTGTAAATATGGAAAATATAGAATATGAACTAGAT
GACGGAGAGCTTATGGCTGAGGAAACGATTACTTCATAG
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