EMLSAT00000004362, EMLSAT00000004362-700209 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004362
Unique NameEMLSAT00000004362-700209
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s229supercontigLSalAtl2s229:662716..663860 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004362 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004362EMLSAG00000004362-687128Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000019021EMLSAE00000019021-727949Lepeophtheirus salmonisexon
EMLSAE00000019022EMLSAE00000019022-727950Lepeophtheirus salmonisexon
EMLSAE00000019023EMLSAE00000019023-727951Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779198auto779198Lepeophtheirus salmonispolypeptide
EMLSAP00000004362EMLSAP00000004362Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004362

>EMLSAP00000004362 ID=EMLSAP00000004362|Name=EMLSAP00000004362|organism=Lepeophtheirus salmonis|type=polypeptide|length=206bp
MRSRYKMKHMAFLYFHCSVKHSSKLSETSMLGRNKPVYQPTXYQVNGGSK
RTSSYLPTSNNSFCGGKKRRLQLVFLSFGIILICLGVVAFGSSLSGLYSS
SLTVGVIILALLFLLFGGWMVVLYLRTRGKCNFSFWPNRAAVLSQQLTAN
TELPTRPRGSQEEESLMPSSEGGPTPTIVASSRKFLGSEREDMALDEVFV
TEKAEK
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mRNA from alignment at LSalAtl2s229:662716..663860-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004362-700209 ID=EMLSAT00000004362-700209|Name=EMLSAT00000004362|organism=Lepeophtheirus salmonis|type=mRNA|length=1145bp|location=Sequence derived from alignment at LSalAtl2s229:662716..663860- (Lepeophtheirus salmonis)
ATGAGATCCAGGTATAAAATGAAACATATGTAATAAGGCTCTATGTTACA
CACATATAACTCTGCTTGTAATGAGTCATTCCTTTTATTGAAGGGCCTTC
CTCTATTTCCATTGTTCTGTCAAACACAGTTCAAAACTATCAGAGACATC
CATGTTGGGTCGAAACAAACCCGTGTACCAACCCACGKCCTACCAAGTCA
ACGGCGGCTCTAAACGTACTTCCTCCTACCTTCCAACATCCAACAACTCC
TTCTGTGGAGGAAAAAAGAGACGACTTCAGCTTGTATTTCTCTCCTTTGG
GATTATCCTCATTTGTTTAGGAGTGGTGGCTTTTGGCTCTTCGCTTTCTG
GACTCTATTCATCCTCTCTCACCGTTGGCGTTATTATATTAGCACTCCTT
TTTCTACTCTTTGGAGGATGGATGGTCGTACTCTATTTAAGAACAAGAGG
GAAGTGTAACTTTTCCTTTTGGCCTAATCGCGCTGCAGTTCTAAGCCAAC
AACTCACAGCAAACACAGAGCTTCCAACACGTCCTAGGGGATCCCAAGAG
GAAGAAAGTCTTATGCCATCGTCCGAAGGAGGACCAACRCCCACAATTGT
AGCCTCTTCTCGTGCATAAGCATGTTGAAGTAGACTTCAGTATTTTGTCC
ATTGTCAAACAATTTAATCTTTTTTCCGTAATCTCAAATACATTTAATGT
TCTTTTTTATTATTATTTTAAACTTTATGTATTTGTCTTTCCTTTTTATA
TAAAGTGTTGACTCCTCTCTTTTGCTAAGAAATTTTTTTTATAATATGGA
GTTTTGTTAATCCACTAATTTGTTTATTCGAGTTCTAAGATGATGATGTT
TATTCTACGTTATTTTCATTAATATAAAAATATATATTTTATAATTAAAT
AAAAAAGAAATAATATGATACAAAGTTGAGCATTTCGTACAAATTAAGGA
AGATTGTCCATGATTTATAGTTAAGCATTGAATTATGTTCAAAAACATAA
AAAGAGATTCACATGGATGGAGAAATATGTTCTTATAATTAAAAAAATAT
ATTAAAGATTATTATTTTAAGGTAAATTCCTTGGCTCTGAGAGAGAAGAC
ATGGCCTTAGATGAAGTTTTCGTGACAGAGAAGGCTGAAAAATAG
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