EMLSAT00000004422, EMLSAT00000004422-700269 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004422
Unique NameEMLSAT00000004422-700269
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s231supercontigLSalAtl2s231:1286978..1288132 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004422 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004422EMLSAG00000004422-687188Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000019266EMLSAE00000019266-728194Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780597auto780597Lepeophtheirus salmonispolypeptide
EMLSAP00000004422EMLSAP00000004422Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004422

>EMLSAP00000004422 ID=EMLSAP00000004422|Name=EMLSAP00000004422|organism=Lepeophtheirus salmonis|type=polypeptide|length=384bp
MSEHIAEKPLLISIAQGSHTFGSQLLFQINKPEQNAVFSSYSVSSVISMA
ALGAKGNTFQQIKDALRLPEDMESLKSAYSHITSLTKSDDNITLEIANSV
FPSSNLELRKEYLRDVKKHFQSDIQVLNFRQTEEARRILNDWVLKETNGK
VNELFKLGSIRADTLNVLVNAIYFKGDWLVKFNPGDTTVRNFYVSPEKTV
KVPTMFASDIKYAVTHNDDLKCKIVALPYKGERITMYFFIPDEKFGLREL
EQKLSTSTFNPSILETLTHRMKTPIYLPKFKLESYYDLEGACKSLGLTDM
FNKNSDFSGMVGEPGDLYVSKIVQMAXIEVNEEGCEAAGATGMVGFGSSM
PQPLVINHPFIFMIKDKASGLVLFSGRVVNPLNS
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mRNA from alignment at LSalAtl2s231:1286978..1288132+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004422-700269 ID=EMLSAT00000004422-700269|Name=EMLSAT00000004422|organism=Lepeophtheirus salmonis|type=mRNA|length=1155bp|location=Sequence derived from alignment at LSalAtl2s231:1286978..1288132+ (Lepeophtheirus salmonis)
ATGAGTGAACACATTGCAGAAAAGCCCCTCTTAATCTCTATTGCTCAAGG
ATCTCACACATTTGGGAGTCAACTACTTTTTCAAATCAACAAGCCCGAAC
AAAATGCCGTATTTTCAAGCTACAGTGTCTCAAGTGTTATTTCCATGGCT
GCACTTGGAGCTAAAGGAAATACATTTCAACAAATCAAGGATGCTCTTCG
TCTTCCTGAGGATATGGAGTCTCTAAAGTCTGCTTACTCTCACATCACAT
CATTAACAAAGTCAGATGACAACATAACTCTAGAGATTGCTAATTCTGTT
TTTCCATCAAGTAATTTGGAATTACGGAAAGAGTATTTGAGGGATGTTAA
GAAACACTTTCAATCAGACATTCAAGTCTTGAACTTTAGACAAACTGAAG
AGGCAAGGCGGATCCTAAATGATTGGGTTTTGAAAGAAACAAATGGAAAA
GTCAATGAATTATTTAAGCTTGGTTCTATTAGAGCAGATACGTTGAACGT
TCTTGTAAATGCTATTTATTTCAAGGGAGATTGGTTGGTTAAGTTTAATC
CTGGAGATACAACGGTAAGAAACTTTTATGTTTCTCCAGAAAAAACTGTC
AAAGTCCCTACCATGTTTGCGTCCGATATCAAATATGCTGTAACACATAA
TGATGATCTTAAATGTAAGATTGTTGCATTACCATATAAAGGAGAACGGA
TCACAATGTATTTTTTCATTCCGGATGAAAAATTTGGGCTACGAGAGTTG
GAACAAAAGTTATCGACGTCTACTTTCAATCCCTCCATCCTTGAGACATT
AACTCATCGAATGAAAACCCCAATTTATTTACCAAAATTTAAATTGGAGT
CCTATTATGATCTAGAAGGAGCTTGCAAGTCTCTTGGATTGACGGATATG
TTTAATAAAAACTCTGACTTTTCAGGTATGGTTGGAGAACCTGGAGATCT
CTATGTTTCTAAGATTGTGCAAATGGCTGKCATTGAAGTTAATGAAGAGG
GATGTGAGGCTGCAGGGGCTACAGGGATGGTTGGGTTTGGAAGTTCAATG
CCTCAACCTCTCGTTATTAATCATCCTTTCATTTTTATGATCAAAGACAA
AGCTTCGGGGTTAGTATTATTCTCTGGAAGAGTAGTAAATCCCTTAAATT
CATAA
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