EMLSAT00000004478, EMLSAT00000004478-700325 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004478
Unique NameEMLSAT00000004478-700325
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s232supercontigLSalAtl2s232:744130..745292 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004478 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004478EMLSAG00000004478-687244Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000019477EMLSAE00000019477-728405Lepeophtheirus salmonisexon
EMLSAE00000019478EMLSAE00000019478-728406Lepeophtheirus salmonisexon
EMLSAE00000019479EMLSAE00000019479-728407Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779565auto779565Lepeophtheirus salmonispolypeptide
EMLSAP00000004478EMLSAP00000004478Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004478

>EMLSAP00000004478 ID=EMLSAP00000004478|Name=EMLSAP00000004478|organism=Lepeophtheirus salmonis|type=polypeptide|length=248bp
MCKKYLINEVLIYLMLIFHHAISYNFVGGENVQATEETTLPFYPKPNHPD
LLPSFSSILHSVYDESTHETGSFEFDAQKKSSESKSMGRKDLISGELLVS
IPLKVILSSLKDNPFLLGRDFKQGSPKPSSTPPLFSISSHPLPQTSSIDD
ILSYIGLGPLSHPCKLEFICSILSRPIKYRPLSDILYLLLTSPQEKDEPY
KQILLNKSHTCAPIPTGFSNCHEPQRINLGILRLWQRLSKYYDFHLSP
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mRNA from alignment at LSalAtl2s232:744130..745292-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004478-700325 ID=EMLSAT00000004478-700325|Name=EMLSAT00000004478|organism=Lepeophtheirus salmonis|type=mRNA|length=1163bp|location=Sequence derived from alignment at LSalAtl2s232:744130..745292- (Lepeophtheirus salmonis)
ATGTGCAAAAAGTACCTAATCAACGAGGTTTTGATCTATTTGATGCTCAT
ATTTCACCATGCAATCTCATACAATTTTGTTGGAGGAGAGAATGTCCAGG
CCACCGAGGAGACAACTCTTCCATTCTATCCAAAGCCAAACCACCCAGAC
CTCCTACCCTCCTTCTCCTCAATCCTTCATTCCGTATATGATGAGAGCAC
CCATGAGACTGGATCCTTTGAGTTCGATGCACAGAAAAAGTCGAGTGAAT
CGAAGAGCATGGGAAGGAAAGATTTGATCTCTGGTGGTAAGTTGGGATGG
ATTGCTCTCAGTCCATTATTTAACTTTCTGGGTTTTGTTCTTTTTTTGCT
TCCAAATCTGCATTCATGACAATTTAACTGAAGGATAACTTCTTCTCCTT
TAAAAAATAACTAGGTCAAGAATAATGTATACTTATATAAGTATACATTA
TAATATATACTTATGTATTGCTGCTTCCTTAATAACGTCATCATTAAGAA
ATTTATCACATGCAAAATAATAATAAAAGGAATTTACAAAAACCAAAAAC
AAAAAAATTTATGCAATCTCCACATAGATATATATAATATTCATTTGCTA
CTATTTTTTTTCTTTTCTCATATCCTTTTTCAGAGCTACTAGTTTCTATT
CCGTTGAAAGTTATTCTCTCGTCTCTGAAGGACAATCCTTTCCTCCTTGG
GAGGGACTTTAAACAAGGATCTCCAAAACCGTCATCAACCCCCCCTTTAT
TTTCAATCTCTTCACATCCTCTTCCTCAGACGTCTTCCATAGATGACATC
CTCTCTTACATTGGACTCGGGCCTCTTTCCCACCCCTGCAAACTAGAGTT
CATTTGCTCCATACTCTCAAGACCAATCAAATATCGTCCTCTTAGTGATA
TTCTATATCTTCTTCTCACCTCACCACAGGAGTAAGTCCATCCTTATTTT
GCTATCTCATTTTTAACAAATTTTAACAATAATCTCCATCCCTCTTATAG
GAAAGATGAACCCTATAAACAAATATTGTTAAACAAGAGCCATACTTGTG
CTCCTATTCCAACTGGTTTTTCTAACTGTCATGAGCCTCAAAGAATCAAT
CTTGGAATTCTGAGACTCTGGCAAAGGTTGTCAAAGTATTATGACTTTCA
TCTATCACCTTAG
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