EMLSAT00000004538, EMLSAT00000004538-700385 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004538
Unique NameEMLSAT00000004538-700385
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s237supercontigLSalAtl2s237:479337..482221 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004538 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004538EMLSAG00000004538-687304Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000019751EMLSAE00000019751-728679Lepeophtheirus salmonisexon
EMLSAE00000019752EMLSAE00000019752-728680Lepeophtheirus salmonisexon
EMLSAE00000019753EMLSAE00000019753-728681Lepeophtheirus salmonisexon
EMLSAE00000019754EMLSAE00000019754-728682Lepeophtheirus salmonisexon
EMLSAE00000019755EMLSAE00000019755-728683Lepeophtheirus salmonisexon
EMLSAE00000019756EMLSAE00000019756-728684Lepeophtheirus salmonisexon
EMLSAE00000019757EMLSAE00000019757-728685Lepeophtheirus salmonisexon
EMLSAE00000019758EMLSAE00000019758-728686Lepeophtheirus salmonisexon
EMLSAE00000019759EMLSAE00000019759-728687Lepeophtheirus salmonisexon
EMLSAE00000019760EMLSAE00000019760-728688Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778027auto778027Lepeophtheirus salmonispolypeptide
EMLSAP00000004538EMLSAP00000004538Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004538

>EMLSAP00000004538 ID=EMLSAP00000004538|Name=EMLSAP00000004538|organism=Lepeophtheirus salmonis|type=polypeptide|length=581bp
MDEALVDSYLVWGELSIHYSDMCFNLERQNDLSHFLLSIVKSLFNEVQSM
DTIITKIMHFAHKLVNADRASMFLVDNKTNQLYARIFDITNSSNEMKPGS
DNENNNNLMKEIRFPIGTGIAGYVAKTGKVLNVSNVDEDPRFNRNVDEQT
GYTTKSILCMPISIYGSIIGIVQIINKKDGFFTKDDEKSFDIFSTYCGLA
LHHAKLYEKXRRSEHKCKVTMEVLSYHNSATSKEVAPYIQAGPPIDDISV
QRFSFYALDKRDEYKIEKALFMFVDLFGLDRFDYNTLVFFFVTIKKNYRD
VPYHNWSHGFHVANSVYSIIKSDPGLFRPLECLSMFVGGLCHDLDHRGYN
NKFMIDIGSPLASIYTTSTMEYHHFNMTINILQNDKQNILKKFNQEEYRQ
IMGNMKHCILATDLALFFPNKARLTSIIKYETFSWQIPDHRLLVQSILIA
GCDLCNSYKPWDLQLSTVYTVYEEFFKQGDVEKTMGWTPIPLFDRSHASE
IASMQVGFIGGICLPCYELMSQVIPTTSPMMVQCKRNLEDWKKKAVSIKL
QESDEASNKNEDENECDEESEELLEEENEIL
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mRNA from alignment at LSalAtl2s237:479337..482221+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004538-700385 ID=EMLSAT00000004538-700385|Name=EMLSAT00000004538|organism=Lepeophtheirus salmonis|type=mRNA|length=2885bp|location=Sequence derived from alignment at LSalAtl2s237:479337..482221+ (Lepeophtheirus salmonis)
ATGGATGAGGCATTAGTAGACTCCTACTTAGTTTGGGGAGAATTATCCAT
TCATTACTCTGATATGTGTTTTAATCTTGAGAGACAAAATGACCTAAGTC
ATTTTTTACTGAGTATTGTAAAGTAAGTAAATTCTAGTAGAATAAAATAT
ATATATATACATGCCATTTAGGTCCTTGTTCAATGAGGTGCAAAGCATGG
ATACAATTATAACAAAAATAATGCATTTTGCACACAAATTAGTAAATGCA
GATCGAGCATCCATGTTTTTGGTAGATAATAAGACGAATCAGTTATATGC
TCGAATTTTTGATATTACAAATTCATCAAATGAAATGAAACCGGGATCAG
ATAATGAGAATAACAATAATCTCATGAAGGAAATTAGGTAAATACTTTTT
CTACCAACCAAAATATTCACATATGGTATATATATTCTTAAGATTTCCCA
TTGGAACTGGCATTGCTGGTTATGTTGCCAAAACAGGAAAAGTATTAAAT
GTGTCAAATGTAGATGAGGATCCCAGATTCAATCGAAATGTTGATGAGCA
AACTGGATATACCACCAAATCTATTTTATGTATGCCAATTTCCATATACG
GAAGTATAATCGGTATTGTTCAAATAATTAACAAAAAAGATGGATTTTTT
ACCAAAGTAAACTGCAAAAAAAATGTATTAATTTTGGGAAATTTGCTTAT
AATTTACTATTCTTCACCAGGATGACGAAAAATCCTTTGATATTTTTTCC
ACTTACTGTGGCCTAGCTCTACACCATGCAAAGCTTTATGAGAAGAYCCG
CCGTTCTGAACATAAATGTAAGGTAACTATGGAAGTCTTGTCTTATCATA
ATTCTGCAACCTCAAAAGAAGTGGCACCCTACATTCAGGCAGGCCCACCA
ATTGATGATATTTCCGTTCAAAGGTATTGTAATTACCCTGTGATTGAATT
TTAATAATGCACTATGTTCCTTACAGGTTTTCATTTTATGCTTTAGATAA
AAGGGATGAATATAAGATTGAAAAAGCATTGTTTATGTTTGTTGATCTCT
TTGGATTGGATCGTTTTGACTATAATACTCTTGTATTCTTTTTTGTTACG
ATTAAGAAAAATTACAGAGACGTGCCATATCATAATTGGAGTCATGGATT
TCATGTCGCTAATAGTGTTTATAGTATCATCAAATCTGATCCTGGACTTT
TTAGGCCATTAGAAGTAAATATGATTAAAAATATACTGTATATCTAGGTT
TTTACAAAGTTTATAATCGATAAATGTACATTTCATAGTGTCTTTCTATG
TTTGTTGGTGGACTGTGTCATGATTTGGACCATAGAGGCTATAACAATAA
ATTTATGATTGACATTGGATCCCCTTTAGCTTCAATTTACACTACTTCAA
CAATGGAGTATCATCATTTCAATATGACAATCAACATTTTGCAAAACGTA
ACTTTGAATAATAAATGCTTTACTAAGCATACCATCGTGGTTGATTATAT
TTTTTTTTTTGACTAACTTTATAGGACAAACAAAATATTTTGAAAAAGTT
TAATCAAGAAGAATATAGACAGATAATGGGGAATATGAAACATTGCATTT
TAGCAACAGACTTGGCCTTATTCTTTCCGAACAAGGCAAGACTGACGTCG
ATTATAAAATATGAAACTTTTTCATGGCAAATACCGGATCACAGGTAAAC
TTGCTTTTTACTTGCAGGGATACTATTAACTGCAATTAATAAGGGTCAAA
AACAAATCCTTTTGTTATTTTTTGTATTTGGCCAAATATCTAGAGTCGAT
ATTTTGTATAATTAGAGTTTATCCCCTTTACTTTTGACTAAAACGATGGC
TTTATGAATAGGCTTTTAATTCAAGCAATATGTTTGACGGGTTGCGACTT
GAGTTCATCGTCCAAACCTTGGTCCATTCAGGAAAAAACATCCTCCCTTG
TGTATCAAGAATTTCATGAACAAGTACTGTGCATATTGAGTTTGGATTGT
ATTAAAGTCATATTTTGAAAACTTCTCACTTATACACTAAAAAAAAAAAT
CTTAATATGTAAGATTAGTTTAAATCCATAGTCGATGTGTCACATTGCTA
TTTTCATTTCCTTACATTAGCCGCTTTTGTAGTCATTAACTATGCTCAAT
TTATCTTACGTAATAGCAGTAGTATTAAATTAGATTTAATGTTCTGCCTC
ACACAATTATTAGATTTCTTAAATATTAAATTATTAATCCCTACCCATGG
GATATTAACAATAGATATACGTAGCTTGCTTGTAGTAACACCATAATTTA
CAGACTCTTAGTTCAATCTATATTGATAGCTGGATGTGATCTCTGCAATA
GTTATAAGCCTTGGGACTTACAGCTATCAACTGTTTATACAGTCTACGAG
GAATTCTTCAAACAGGTAGACATTTTCTTAAATTAGCAACATCAATGAAC
TAAAAAACGTGAAGTTAATGATACTAAAGCTTATGATTTATTTCATATTA
GGGAGATGTTGAAAAAACAATGGGTTGGACTCCCATTCCTTTATTTGATA
GGAGTCATGCCTCAGAAATTGCTTCAATGCAGGTAATTAAAGCGAGTTAA
GAATCCGGTAACTGTGAAAAAAAAATACCCTTAGGTCGGCTTCATTGGAG
GKATATGTTTGCCTTGCTATGAACTCATGTCACAAGTTATACCAACTACC
TCGCCAATGATGGTTCAGTGCAAGAGAAACTTGGAGGACTGGAAGAAAAA
GGCAGTTTCAATCAAGCTTCAAGAGAGTGATGAAGCCTCAAATAAAAATG
AGGACGAAAATGAGTGTGACGAAGAGAGTGAAGAACTGCTGGAGGAGGAG
AATGAAATTCTTTAATATAATGCTAAAAATTTTAC
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