EMLSAT00000004570, EMLSAT00000004570-700417 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004570
Unique NameEMLSAT00000004570-700417
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s238supercontigLSalAtl2s238:699874..700592 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004570 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004570EMLSAG00000004570-687336Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000019894EMLSAE00000019894-728822Lepeophtheirus salmonisexon
EMLSAE00000019895EMLSAE00000019895-728823Lepeophtheirus salmonisexon
EMLSAE00000019896EMLSAE00000019896-728824Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779387auto779387Lepeophtheirus salmonispolypeptide
EMLSAP00000004570EMLSAP00000004570Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004570

>EMLSAP00000004570 ID=EMLSAP00000004570|Name=EMLSAP00000004570|organism=Lepeophtheirus salmonis|type=polypeptide|length=201bp
MISKIAIIFFGFVGLSLASFKANLANNEATVLQEIRLNSVRMAEANLHNE
NLCFFRTMCAVGTQRTVPIMTLAAGIVGFRKILDKVMDDIXDSGINEYNF
PSIYRAVASYEVGISTKNLDLCEKLFPCIQTATHLLNEAVTVKHRNSRAT
CNAVGSLCPGVSIGCALCGVFAPGTCGQQCIVGGIYCGVSSYSCSYKDKE
D
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mRNA from alignment at LSalAtl2s238:699874..700592-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004570-700417 ID=EMLSAT00000004570-700417|Name=EMLSAT00000004570|organism=Lepeophtheirus salmonis|type=mRNA|length=719bp|location=Sequence derived from alignment at LSalAtl2s238:699874..700592- (Lepeophtheirus salmonis)
ATGATTTCTAAAATCGCCATCATTTTCTTTGGATTCGTCGGTCTGTCATT
GGCATCCTTTAAGGTTTGTTCATTCTTAAAATTCAAAGGTTTTAAATATT
GATTATAATATCCCCTTAGGCCAATTTGGCAAACAATGAGGCGACAGTAC
TCCAAGAGATTCGACTCAATTCCGTGAGAATGGCCGAGGCCAATCTCCAT
AATGAGAATTTGTGTTTCTTCCGTACAATGTGTGCTGTTGGAACACAAAG
AACTGTACCAATCATGACATTGGCAGCTGGRATTGTTGGATTTAGAAAAA
TCCTTGATAAAGTCATGGATGACATAARAGATTCTGGAATCAATGAGTAT
AACTTCCCTTCAATTTATCGCGCTGTTGCTAGTTATGAGGTTGGGATTTC
AACCAAAAATTTGGATTTATGTGAGAAATTATTTCCTTGCATTCAAACTG
CCACCCACCTTTTGAATGAGGCTGTCACTGTCAAACACAGGTAAGACCGG
GAATATTTACTATATATTTATGATACATGTTTTACTTATTCTTGTAGAAA
TAGCCGTGCAACTTGCAATGCTGTTGGATCTTTGTGCCCTGGTGTCAGCA
TTGGATGTGCTCTATGTGGTGTTTTTGCTCCTGGAACATGTGGACAACAA
TGCATCGTCGGAGGAATCTATTGTGGGGTTAGCTCCTACTCTTGTTCCTA
CAAGGATAAGGAAGATTAA
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