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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s23 | supercontig | LSalAtl2s23:188535..195581 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000004583 >EMLSAP00000004583 ID=EMLSAP00000004583|Name=EMLSAP00000004583|organism=Lepeophtheirus salmonis|type=polypeptide|length=946bp
MPASTADPISSTLKRSFGNHSKLLEEGLESALTKRSLVPVPFDPPSRIST
NSPLKHYIILNSESGLSTCKANGTQEXSASPVSIPKPKVTFYKREDVKVG
YQGPFSPGAGMMNVGNTCYLNSTLQALFHTPSLINYLTDGHHRCNNGGSG
GYSIHSCTICALSLTLKDTHRTNIVRPSRVYEKLKTICKHLVHGRQEDAH
EFLRYLIESLQKSFLISAKAKNLDSASKETTPFNQIFGGYMRQDVTCVRC
KYVSTTFQHFMDLLLDIRSASNIEEALAHYFRSEKLGGMDGSNMYKCEKC
KVKVPAHKASFIERPPVVLCIQLKRFALTGGKISKPVQLSRRLEVSRFVR
GGMAKGNKLEYRLVSMITHVGPSPNCGHYXAIGEASNGQFYQFDDSHVRP
VPVSQALNTASYVVMYEMTQATHCHWTKQPQTNQILQPPPPSTTLVSINK
QMRDDAKNHFNNSSHVNHAKNSGTINGMHKPPLPSPISSLPKKLVPYDEL
DSSSTEDEDKSNATNNHSHREVTKSQNGLNXNXQPHLSNGDASKNGCNNG
KRVYSNSSGFLPMSIALKHQQISSDEKRVSASGTWTVVDMDHHNPSIHSD
XSSSSGGQWXIHNLQNKRSDSDTEAASRGPIWNVKQTSTNSDSEVGSPKK
VKKMITVKEAISKISRLFPQKNKSVSSVLNGNDTRGGSSEGHHKNDNTSP
SSSRNTNSNNSHASQISTSENEGGGMDHDEERGSSLNRKESHEDDIRKKK
RKKSFSNGFDESPSKKYINSSDSRWSSSSNNGGGHSNGNGGNSNVVDELI
RQSSLSDKVTSWNGSKSSTFSSSFNYNRSRSDSRDRYDEEMDRGRTKKIK
RRHSDTXPYHSSSSNGMNPFQAAQQNGFHHSNSYHHSHHHRNSSSYKDXN
NRXHRRPYHHRNSLRNSHGGSFNEENFRKGGGSSYRQNDYHHRSRR back to topmRNA from alignment at LSalAtl2s23:188535..195581+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000004583-700430 ID=EMLSAT00000004583-700430|Name=EMLSAT00000004583|organism=Lepeophtheirus salmonis|type=mRNA|length=7047bp|location=Sequence derived from alignment at LSalAtl2s23:188535..195581+ (Lepeophtheirus salmonis)
GCAATACGATATAAAATAGCCAAAATATAGTGTTCATTCAATGCTTAATG
ATTGAGCATATTCTAAACCCCCGTTAGAATTCCTCATTCTTTTCTTCAAC
AGTAATTAATACCCATATTTATTTGCAATTCTTTTGTAACATGTGTAGGG
GGAGTCGACCTTGAAGTGTATTATCACAAAGAGTTTGAAGGAACGACACT
ATCTCTAATCTACACACATTATTAAATAGTCAATGTGTAAATATTTAGGG
CATCTCGGCCGGTTTTTTTACTCTCGCCTCTTCCTCAGCTTCTTGAGAAG
AATAATAAATTAATATTATGTAGTAGTCCTCTACTTACTAGTATACAATG
TATTATTTATGAAATAAGGAGTGTGTGTTTCTGCGTCTGTTTGTGTGTTC
CTGTGTTTCCCTCATTTTTAGTGTTATTTATTTAGTCGCCATTTTGAAGA
ACGTGGTTGTGATATTATTATATGTATATAAATTCTGCTGAAAACCTGGA
CTAGGTGGTGGCCGGGCCAGAAGCGGATCTGCGTCTTTACATTTGTTTAT
TTGGCTGCTTATTTCATGTGGAGTAGAACTACTAGAGTAGCTCAACTGTT
AAGTGAGGTCTACAACAACTAGCACTACCTTGGCGGCTTGGAGATTATTC
GTTTAGTCCTAAAGGAAGGATGCCGGCCTCCACGGCAGACCCCATCTCAT
CCACTCTCAAACGGAGTTTCGGCAATCACTCCAAACTCCTGGAAGAGGGT
CTGGAGAGTGCTCTTACCAAAAGAAGTCTAGTTCCTGTTCCGTTCGATCC
TCCTTCACGGATCTCAACCAACTCGCCCCTCAAACACTACATTATCCTGA
ATTCCGAGTCCGGGCTATCCACGTGCAAGGCGAACGGGACCCAAGAGGKC
TCCGCCTCTCCCGTATCCATTCCCAAGCCCAAGGTTAGCGCCCAAAGAGT
TGTATCTCATGTTGCTAATTGAATCTCCCTCATATTGCAGGTCACGTTCT
ACAAACGCGAAGACGTCAAGGTGGGCTACCAGGGCCCCTTTTCCCCTGGG
GCCGGAATGATGAATGTCGGCAATACCTGCTACTTGAATTCCACACTCCA
GGCTCTTTTCCATACACCTTCCCTTATCAATTATCTCACTGATGGCCATC
ATCGCTGTAATAACGGCGGMAGCGGCGGGTACTCCATTCATTCTTGCACC
ATCTGTGCGCTCAGTCTTACACTTAAAGATACACACAGAACCAACATTGT
CCGACCCAGTCGTGTCTATGAAAAGTTAAAAACCATTTGTAAGCATCTTG
TCCATGGAAGACAAGAAGATGCACACGAGTTTTTAAGGTTTGTTTCTTAT
TTAAATGTGTATAACATATATGAGCAGTGGGGGTATAGCAATCACTCTAT
TCCTAGACTAACACTTAATACAAATGTAGCGTGGCTTTCTTCAATTAAAC
TCCTAATCACCATGATATCAATAATAAAAACATGATAACTAATGTTTAAT
ATATGACATGAATATATCATGTTCTGACAGGGATATTGTGATTTTTTTAA
TTCCACTCTTTATCTGTTATCTATCAGCAATTTGCATCTTTTTAATATTG
ATAATTACTTATTTATGTAGGTACTTGATCGAGTCACTTCAAAAGTCATT
TTTAATATCTGCCAAGGCTAAAAACTTAGACAGCGCGAGTAAAGAAACCA
CACCATTCAATCAAATATTTGGTGGCTATATGCGACAAGATGTGACATGC
GTTCGTTGTAAATATGTTTCAACCACGTTCCAGCACTTTATGGACTTGTT
ACTTGATATTCGATCTGCTTCAAACATAGAAGAGGCATTAGCTCATTATT
TTCGCTCTGAGAAACTGGGAGGAATGGACGGATCCAACATGTATAAATGT
GAAAAGTGTAAAGTTAAAGTTCCAGCACATAAAGCATCATTTATTGAAAG
GCCTCCAGTCGTGCTATGTATTCAACTAAAGAGATTTGCTCTCACTGGAG
GTAAAATCAGCAAACCAGTTCAACTGAGTCGAAGACTAGAAGTTTCGAGG
TTTGTGCGAGGTGGTATGGCTAAAGGAAATAAATTAGAGTATCGACTTGT
CTCTATGATTACCCACGTGGGGCCCTCTCCAAATTGTGGACACTACKCAG
CCATTGGAGAGGCATCGAACGGACAATTTTATCAATTTGACGATAGTCAC
GTTAGACCCGTGCCTGTATCTCAGGCATTAAATACTGCTTCATATGTAGT
AATGTATGAAATGACACAAGCTACGCATTGCCACTGGACTAAACAACCCC
AGACAAATCAAATTCTTCAGCCACCACCTCCTTCAACAACCTTAGTCAGT
ATCAACAAACAAATGAGAGACGATGCTAAGAATCATTTCAACAACTCCTC
CCATGTGAATCATGCCAAAAATTCTGGTACAATAAATGGAATGCATAAGC
CGCCCCTGCCTTCTCCAATTAGTTCATTACCGAAAAAGTTAGTCCCATAC
GATGAATTAGATTCTTCGTCTACAGAGGACGAAGATAAAAGTAACGCCAC
TAACAATCACAGCCATCGGGAAGTCACTAAAAGTCAGAATGGCTTAAACY
AAAACAKCCAGCCACATTTATCTAATGGGGATGCCTCCAAAAATGGTTGT
AATAATGGAAAGAGAGTCTATTCCAACTCCTCAGGTTTCCTTCCTATGTC
CATTGCCCTGAAACATCAACAGATATCTAGTGATGAGAAGCGAGTCTCAG
CTTCAGGGACTTGGACAGTTGTCGATATGGATCACCATAACCCATCAATT
CATAGTGACAKCTCCTCAAGTTCMGGAGGACAATGGCMTATCCATAATTT
ACAAAACAAACGCTCCGACTCTGACACTGAGGCGGCATCTCGAGGCCCCA
TATGGAATGTTAAACAAACATCAACAAATAGTGATAGTGAAGTGGGCTCT
CCCAAAAAAGTTAAAAAAATGATAACGGTCAAGGAAGCCATTTCCAAAAT
TAGTAGATTATTCCCACAAAAGAATAAATCCGTATCTTCAGTGTTGAATG
GGAATGATACTCGTGGAGGATCTTCTGAAGGGCATCATAAAAACGACAAC
ACCTCACCCTCATCAAGTAGAAACACGAACAGTAATAATTCCCACGCCTC
ACAAATCTCCACGTCCGAAAACGAGGGAGGAGGAATGGATCATGATGAGG
AGAGAGGATCTTCTTTAAATCGAAAGGAATCTCATGAAGATGACATTCGC
AAGAAAAAACGAAAAAAGAGTTTTTCGAATGGTTTTGATGAGTCACCTTC
CAAGAAATACATAAACAGTTCCGATTCACGATGGAGTAGTAGTAGTAATA
ACGGCGGTGGTCATTCAAATGGAAATGGTGGAAATAGTAATGTGGTGGAT
GAGCTCATACGACAATCCTCATTGTCGGATAAAGTGACTTCATGGAACGG
TAGCAAATCCTCGACATTTTCTTCATCTTTTAATTACAATCGATCTAGAA
GTGACTCACGAGATCGCTACGATGAAGAAATGGATAGAGGGCGAACTAAA
AAGATTAAGAGACGCCATTCCGACACTTTKCCCTACCATAGCAGCAGTAG
CAATGGAATGAATCCATTTCAAGCGGCTCAACAAAACGGATTTCATCATA
GCAACAGTTATCACCATAGCCACCACCATAGGAATTCTTCCTCCTACAAG
GATTAWAACAACAGACKCCATCGCCGCCCCTATCACCATCGAAATAGTTT
GAGGAATTCCCATGGGGGTTCCTTTAACGAGGAAAATTTCAGAAAGGGAG
GAGGAAGTAGTTATCGCCAAAATGATTACCATCATCGATCCAGACGATGA
ACATAACGAAAGGAATATTATTATTKCAGCCATGATCCTCTTATTCTATC
TCTGCTACTCTTTCCAATCCCCTTCTGATGATGAGTTGATAAAACCTTGC
AAAAAAATATTAATTATTATTAAAAGTTGAAACAACTTTGTATGCTATAT
ATACACAAACGTTTTATGCCTATTTTTTTACTGAAAATAAGTAACTTATT
TTTTTTTTTTAATGAAGAATACACGGGCTTATTTGTTGTAATTTGAAGAA
GATAAAAAAAATTCCTACAAACTGTCATGAAATAGAGAGGAGAACTTATT
TGTGATTTAATTTTTGTTAATATTAATTACATCTTTTTAATATAATAATC
ATTGTCTAGTTTGTATTACCTATTCTCCTTCTCTTTATCAATCTCTTCTA
CTTCTTATTGATTTTTTTTTTCTCAGAATATTTAAAAATATATATATTGT
TGAAATATTAATTATATATATAATTTTCATACTACTTAATAATCAGTAAA
ATTCAATTAAAATCTTCCAAATATTTTAATATTTGTCCCCCCAAATTTGA
ATTTTACAAATCTCTCTAGGTGCCTTTGGAAAGGGGGGAGTGGATTAAGT
TAATGATCTCCACCATTACAAAAATCTCCTTCTTTAAAGATTGTTTGTTT
TTTTTTGTCACGGAAGACGCGCGACTCTCCTTAATCAGTCATCATGAACA
CTTCACATCTCATAATTCCAGACACAAACATGTTTGAAAATGAAATTATC
ATTCATCAAAAATGGGCAGGAGCCTCTTGGATGTCAAGTGTGTCTGGTGT
CATGGTGAAGTTCTCTGAGGAACTAGGCCCTGCTGATTTCCAGACTTATC
CTTCAAATGTACTTCTTCTCATCAATGAAGATGACTACGTGGCTGAGTCA
AGAACATATAAAACTAAATTGGCCAAGTTCTATAATTCTGTTATCAATTG
CGAGGTACTTACGTAATTATTATCATACACTTAATTAATTCACACCAATA
TAGCTTAAAATTAGTTTAAATTTTGATAAGTTAACTCTAATTTTTTTTGG
GGGGGGGGGGCGGACCTGAAAAAGCGTTCATTGTATGAAAACGTTTTATA
AGACCAGTAACAACATTTTTTGTATTCGAGTCTTAATGGTTATGTACATT
TTAAATTTGAAATAATGCTTTTGTGGTCGACCAATCAACTTTTTTATATT
TTATTCAAACTCATTTTTCATCATGAGGAAAAGGAGTAATTGATAAAATC
CTTTCATATAAGTTATAAGCAAATGTATCCAGATCTTAAATATGTTATAA
TATTTATATATCTTGTTTCAAATTTGAGGAAAAAAAGTGTAGACAGGAGA
ATTGGGCCCCTTTTTGGGGATTTATTATCTGTAGTTTCACATTCGATAAC
ACACTCAGAATATTATTAAAAAAGGACACCTTCATAGATGTCGTATTTTT
TAAACGGATTAAAGATTTAGTTTAGAAATTAATACTTAAAATTACTCAAG
GTCCATATGTAAACCACAAAAGTAAAATTTTAAACGATCCTTTTCAGGTT
TTTTTAGTTATTTTATGATAACCATTAAAATCTGGACACAAAAAATATTT
AAAATGAGTTGTATAGTTTATTTATGCAATATTAGAGGGTTATGTTCACA
ATTTTGGAGTGACTTAAGTTTGCTGAAGCTTTTAAATCATCTATGTATGA
GAGGCTGATTAGTTTTGCATTAAAATAACTAGTTTTCTCTCAGACTTGTG
AAGTCCTTGCGTGAAACTCAAAAAAATTAGTAGTAATCTTTCATTATTAA
TGAGCTATTTTTACCAACTTACATATGATAATTTTTAATTCCATATATTC
CATCAATCAAGGGCTTAAAAGGAACAGTCATTTGCGTCAAGTCTTCAGAT
TTGACTGACACCGGATTCATTGCTTTACAAACATTCTGTATCATAGACTT
GGGTCTTCAAATAATTCCTATACGAAATATAGCCTCTCAGTTACCTCAAC
TCCTAGTTCAGTTTTCCATTTCGAATAATCGCCATAGAAAAGTGAATCCT
TTCAAGTTCGGCATTGACACAAATGAATCCAATTCATCTACTCATGGATA
CCCGGATCCTAAGCTCATAGAGACACTCTCTACTATTTATGGATTAAGTG
ATTTAAAAGCCCGATTACTCTTAGAAAAGTTTGGAAGTATCTATGAAATT
GCCCGATTGTCAGTTTCAACAATGGCTCCGGTCATCGGAACTTCCGCAGC
GCGCTTTGTTTTTAATTTTTTTCACCAAAAAAGAAATTAGTTATTATTCC
TAATAAATAAATTTAGAAAATTCTCAATTGAATTGAATTCAATCACAGTT
ATGTGCCAAAAGAACTTACATTTCGATTTTTTTTTAAAGGATGTTTCTGA
AGGGTCTCTCTCGATGTTTCAGCACCAGTTCCTCCACTTTCCGTTGGCAT
TCAGAGAAAGTAGCAAACCCTCATTTACGTCGATATGGCTATGTTGACAA
AGTTAAAACATCAGGTCCTCTCCCGAGAGTGAGCAATGATTCAGACAGAA
TTAACGGTCTCCATCTTTTCATCAGAGAAAATCCCTGGGTCCCTTCTAGA
GCTCTTGCGGGTCAGAATGACTATATAGACATTTTAGGTGATGAAGAAAT
ACATCCTGTTGATCTTATGTACGGTATTCCCAAGTGGCTCCGTGGGTTTC
AAGGAACTTATCTTCAAACAATGATTCGAAAGAGGGACATGTTGAGAGAC
ACGGGATTTGATAAAGTTAGACCCAAAGACTGGAAGCAGCTCAATGTTAA
TTTGACTAGGGAATATAGAAAGAATGTTCTCTCATTAAATCAAAGAAGGT
GGACTAATTATAAAGGCATTAAGTTTGGACCCGCACCTAATCATTTTCAA
TCTCCAAGAGGACCTTTTTAACCACTCCTAATCCTCTACATAATATGCTT
TGTGGAAAGGAACTGTTATTTTTTATAAGTATATTTAGCTATTAGTCATG
TCGTCGATTAATCCAGTTCATGATTTAATATACCATTTTTGTTCCTAATT
TTACTCGGTGTGAACACTTTTATTAATCAGTTGACTAACACTTGAAGGTA
GAATGATTCTTGGGTATTAACTACATATTACAATATTAATCAAATAATAT
CTGACTGATAGGTGTTATCATAATCATTTAAAAGTTTAAGTGCTCTA back to top
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