EMLSAT00000004622, EMLSAT00000004622-700469 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004622
Unique NameEMLSAT00000004622-700469
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s240supercontigLSalAtl2s240:565157..566192 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004622 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004622EMLSAG00000004622-687388Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000020164EMLSAE00000020164-729092Lepeophtheirus salmonisexon
EMLSAE00000020165EMLSAE00000020165-729093Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778622auto778622Lepeophtheirus salmonispolypeptide
EMLSAP00000004622EMLSAP00000004622Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004622

>EMLSAP00000004622 ID=EMLSAP00000004622|Name=EMLSAP00000004622|organism=Lepeophtheirus salmonis|type=polypeptide|length=307bp
MATSSSNLPLQDSGSINSESGIRYSLKIMEEPICNFEFQTGIDLASIVNS
EIFDKVPPTNSSSPVRPSSPRPTKVRSPKRSSSFLTFKRRSLPPSYLQEA
LHSLFQKSSPDFNNCISSNKKSLRPHKYPQHDLPLSFLNKRLISRFPLNL
YEKFRHKSHATMSSFNESSSGPTEHTTSSLSSSSSTSISPTELKAPGGYV
EAVERADGALNTELQKESSSDGSVNLRVVKKNTILSKGVSASNSELDQFY
NESKRIYDCALCKCIFKYKGTLKRHLLVKHTSGDGVIDFNKGVKSQSLNF
IFNAKKK
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mRNA from alignment at LSalAtl2s240:565157..566192-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004622-700469 ID=EMLSAT00000004622-700469|Name=EMLSAT00000004622|organism=Lepeophtheirus salmonis|type=mRNA|length=1036bp|location=Sequence derived from alignment at LSalAtl2s240:565157..566192- (Lepeophtheirus salmonis)
ATGGCGACTTCATCCTCAAATCTCCCTCTCCAAGATTCTGGGAGTATTAA
TAGTGAATCTGGGATTCGTTATTCTCTCAAAATAATGGAGGAGCCCATTT
GTAATTTCGAATTCCAGACGGGTATCGATCTTGCCAGCATTGTAAACTCA
GAAATCTTTGATAAAGTTCCTCCAACGAATAGTAGCAGCCCTGTTCGTCC
CTCTTCTCCTAGACCTACTAAAGTTAGATCTCCAAAGAGGTCTTCGTCCT
TTTTAACATTTAAGAGACGATCACTTCCTCCATCCTACTTACAAGAGGCT
CTACATTCCTTGTTTCAAAAATCATCTCCTGATTTCAATAATTGCATTTC
TAGCAATAAGAAGTCTCTGCGTCCTCATAAGTATCCTCAACATGATCTTC
CCCTATCCTTTCTCAATAAGAGACTTATTTCTCGCTTTCCCTTAAATCTA
TACGAAAAATTCCGGCATAAATCTCACGCAACAATGAGTTCTTTCAATGA
ATCATCTTCTGGTCCTACTGAACATACTACTTCTTCATTGTCTAGCTCTT
CTTCGACCTCTATATCCCCCACAGAATTAAAGGCTCCAGGAGGTTATGTA
GAAGCTGTCGAAAGAGCGGATGGAGCACTGAATACCGAGCTTCAAAAAGA
GTCCAGTTCAGATGGTTCTGTAAATCTACGAGTTGTAAAGAAGAACACCA
TCCTTTCTAAGGGAGTGAGTGCCTCTAATTCTGAATTAGATCAATTTTAC
AATGAAAGTAAGCGTATTTATGATTGTGCTTTATGTAAGTGCATCTTTAA
GTACAAAGGAACTCTTAAGAGGCATCTATTGGTCAAACATACTTCAGGGG
ATGGAGTAATTGACTTCAACAAAGGTGTAAAAAGCCAAAGGTGTTTGAAA
CAATCGCTATTTCGTAAGCGTAATTAATAATTTAGTTATCAAATTAGTTA
TATGAATCATTTTTTTATAGATAAAATATTTATATGTTAATATTGTTAAT
AGTTTAAACTTCATATTTAATGCCAAGAAAAAATAA
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