EMLSAT00000004659, EMLSAT00000004659-700506 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004659
Unique NameEMLSAT00000004659-700506
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s242supercontigLSalAtl2s242:788934..791766 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004659 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004659EMLSAG00000004659-687425Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000020336EMLSAE00000020336-729264Lepeophtheirus salmonisexon
EMLSAE00000020337EMLSAE00000020337-729265Lepeophtheirus salmonisexon
EMLSAE00000020338EMLSAE00000020338-729266Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779724auto779724Lepeophtheirus salmonispolypeptide
EMLSAP00000004659EMLSAP00000004659Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004659

>EMLSAP00000004659 ID=EMLSAP00000004659|Name=EMLSAP00000004659|organism=Lepeophtheirus salmonis|type=polypeptide|length=895bp
MNEEDNIAKSTPTIRSDDTEEKSFLQRVNSADNALLTNIPGTTTSSNHSS
HKKLSSDSLKGKTSPEKDNAKPPDLEDEDEGGAHDTITSLAGVQMLQKYR
RNMASGSRGGASSSSLSSLHHNKSARLEDLFSVEEPLIEDDKESLASTGS
PSIKSNISKLTDEDKLSPDTEFVPPDGGYGWXISLGAFIALFWAAGMIKS
YGILFSEILVVFPDASVTLASWIPASMTTFALAMAPIASALCQKFNCRWV
TVFGSLLCALGISLSSFANGIPFLFCTFGVLTGIGVGLSTTPGIIITARY
FDKKRALANMFCLSGTAAGSFILPFAIQNLISTYGFRGATLILGGCMLHI
CISAALYRPIAYHAKIQKMRRIYIYHADLDKVKHKLNSLVTSEADNISIC
SSASSHFHHSHNHVIHPNHHSSSDYLNNHSHFHHLRGSMGSLARSLPPGL
EHNCSGHLRSSNLNSHEELYWPEFSCPKNHEPIEHDKANTFTFPKDPPTD
SGAPLTLRQLYLRQLGSQLSICKSYVLGNSDSCTHNPEKRDPSRSLRNSL
FYNNSFLRRGSILFSVEDMTTDSTGILKDTKNPSHPTLNDFKSITNSSKN
TSIFLERSQSCEQKMRKDLNRRPRYYSEGCDDGQRFKLSPSVQINESDDE
KDFVDNPKIKDPKPKLDKLKKSTSHSKKIDEKTGLRKYIDFMIVKEPLFI
MMSITVMTMSLGVPHVLFFLPAHARNLGFPGSDGSKLLAICSVTDMLGRI
VLTIVVDTNLVPKHICYGLAILTCGFSVLSLSVIGNQFWAMALSMSAYGL
GSGAWFLMIPLLLADYLGVENIGSSYGMIRLFQSSANLFGPIAAGLLKDK
YDSYAPAFILMGIIMVSGSLAAFFQPCIANLRKEKDSDVEETKNE
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mRNA from alignment at LSalAtl2s242:788934..791766-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004659-700506 ID=EMLSAT00000004659-700506|Name=EMLSAT00000004659|organism=Lepeophtheirus salmonis|type=mRNA|length=2833bp|location=Sequence derived from alignment at LSalAtl2s242:788934..791766- (Lepeophtheirus salmonis)
ATGAACGAAGAAGATAATATTGCAAAAAGTACTCCAACTATTCGATCTGA
CGACACAGAAGAAAAGAGTTTTCTTCAAAGGGTCAATAGCGCGGATAATG
CACTGCTCACAAATATCCCTGGTACAACAACTAGTTCAAATCACTCATCC
CACAAAAAACTTTCATCTGATTCATTGAAGGGGAAAACAAGTCCGGAAAA
AGACAATGCTAAGCCACCAGATCTTGAAGATGAGGATGAAGGGGGTGCAC
ATGATACAATCACCTCTCTTGCAGGAGTACAAATGCTTCAAAAATATCGC
CGAAATATGGCCTCTGGATCCAGAGGCGGYGCTAGCTCCTCTAGTTTGAG
CTCATTACATCATAACAAATCAGCAAGACTAGAAGACTTATTTTCGGTAG
AAGAACCTCTGATAGAGGATGACAAGGAATCACTTGCATCAACAGGATCT
CCATCTATTAAATCTAATATTTCTAAATTAACCGATGAAGATAAATTATC
ACCAGATACAGAGTTTGTTCCACCTGATGGCGGKTACGGATGGMTTATAT
CTCTGGGGGCTTTTATTGCACTATTTTGGGCGGCTGGAATGATAAAATCC
TATGGCATATTATTTTCAGAAATTTTAGTAGTATTTCCGGATGCATCAGT
TACTCTCGCATCCTGGATTCCAGCATCTATGACTACGTTTGCTTTAGCCA
TGGCTCCTATTGCATCTGCACTTTGTCAGAAATTTAATTGTCGATGGGTC
ACTGTTTTTGGGTCACTTTTATGTGCGCTCGGAATATCATTATCAAGTTT
TGCCAATGGAATCCCATTTCTTTTTTGTACGTTTGGAGTACTTACAGGGA
TAGGAGTTGGATTAAGTACAACTCCAGGAATTATTATCACAGCACGATAT
TTTGATAAGAAAAGAGCTTTAGCCAATATGTTCTGTCTCTCAGGGACTGC
AGCTGGAAGTTTTATTTTACCATTCGCAATTCAAAATCTAATAAGTACAT
ATGGTTTTCGAGGTGCTACCTTAATTCTAGGGGGTTGTATGCTTCACATT
TGCATCAGTGCAGCTTTATATCGTCCTATTGCGTATCATGCCAAAATTCA
GAAAATGAGGAGAATGTATGACAAAAGCGATAATACANGATTTTGAAGCA
CTTTCTCCGGTAACRCAAGAGCCGTTAGAACCTAAAACTCCATGCAATAG
TTACATTTACCATGCAGATCTAGATAAAGTGAAGCATAAATTAAATTCAT
TAGTTACATCAGAAGCAGACAATATCTCTATTTGTAGTTCAGCCAGTAGT
CATTTTCACCACAGTCATAACCATGTAATTCATCCTAATCATCATTCTTC
ATCAGACTATTTGAATAATCACTCACATTTTCATCATTTAAGAGGTAGTA
TGGGAAGTTTAGCCCGATCTTTACCTCCTGGGCTGGAACATAACTGTAGT
GGTCATTTACGGAGCTCTAATCTTAATAGCCATGAAGAGCTTTATTGGCC
GGAGTTCTCTTGTCCAAAGAATCATGAGCCCATAGAACACGACAAGGCAA
ATACGTTTACATTTCCTAAGGACCCGCCAACAGATTCTGGAGCACCACTC
ACTTTACGTCAATTATATCTTCGTCAATTAGGAAGTCAGCTATCCATTTG
CAAGTCCTATGTACTAGGTAATTCTGACTCTTGTACCCACAATCCAGAAA
AGCGTGACCCTTCAAGATCGTTAAGGAACTCTTTATTCTATAACAATTCA
TTTTTAAGACGAGGAAGTATTCTTTTCAGGTAATTTAATCTAATTTTAGT
TATAAATCAAATAAATTACAAAACAATACGATTTCTTAGTGTGGAGGATA
TGACGACTGATTCAACAGGAATATTGAAGGATACAAAAAATCCCAGCCAT
CCAACACTGAATGACTTTAAATCAATAACCAACTCTTCCAAAAATACTTC
TATTTTCTTAGAACGTTCGCAAAGCTGTGAACAGAAAATGAGAAAAGATT
TGAATCGTAGACCTCGTTACTATTCTGAAGGATGTGATGATGGTCAACGT
TTTAAACTTAGTCCTTCTGTTCAAATAAATGAAAGCGATGATGAAAAGGA
TTTTGTAGATAATCCAAAAATAAAGGACCCTAAACCGAAATTGGATAAGT
TAAAAAAGTCTACAAGCCACTCTAAAAAGATTGATGAGAAAACGGGCTTG
AGAAAATATATAGATTTTATGATCGTTAAAGAGCCTTTATTTATAATGAT
GTCCATAACTGTGATGACAATGTCATTGGGAGTGCCTCACGTTTTGTTCT
TTCTTCCTGCACATGCTCGTAACTTAGGTTTTCCAGGATCAGATGGTTCC
AAATTACTTGCTATTTGTTCCGTTACTGATATGCTAGGTCGTATCGTTTT
GACCATAGTCGTCGATACAAACTTAGTACCTAAGCATATTTGTTATGGGC
TTGCTATATTGACATGTGGGTTTTCTGTTTTGTCTTTGTCTGTAATTGGT
AATCAATTTTGGGCCATGGCTTTATCTATGTCTGCCTACGGTTTGGGCTC
TGGAGCTTGGTTCCTCATGATACCTCTTTTATTAGCGGACTACCTTGGGG
TTGAGAACATCGGCTCTTCCTATGGAATGATTCGATTGTTTCAATCTAGT
GCAAACCTATTCGGCCCAATAGCTGCGGGACTACTAAAGGATAAATATGA
TAGTTATGCACCGGCATTCATTCTTATGGGTATAATTATGGTAAGTGGCT
CTCTGGCCGCTTTCTTCCAACCTTGCATCGCAAATCTTAGAAAAGAAAAG
GATTCGGATGTTGAAGAAACTAAGAATGAATAA
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