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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s251 | supercontig | LSalAtl2s251:1093612..1101306 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000004777 >EMLSAP00000004777 ID=EMLSAP00000004777|Name=EMLSAP00000004777|organism=Lepeophtheirus salmonis|type=polypeptide|length=524bp
MEEAIKLLVFDFINFISFLKKQPNVPKSWLSRIKRLELKCDNLGLTSKST
PESPPVINLPHSVPDSSGSNNSTTLSPKSSAPVVVDVNYVSEFDKDDLSL
IGPNLNEESSTGHHHHLNSTAKGNAISKWSLKPEECDRDLLMEHSIKIGK
VYVKNFKNLISSTLGKKVEKTALLTNDFRFLLYKPYKAKIDIFEASDEQE
RDAWGEIDLLPSPPTPNQAESQYEFEDTSSYTSSSSDSSLSLCSPVDTSE
FIEEPPSLPLKNQGPLKGPTDIPPRSKCLLKSKVQPPPCPLDDFDDEDFP
PPPSPELPPELPPKNRTLDRKASTKKKSKILSNRGSLPIESSLKPHSKRD
SSHGFHSNSSEEHASQRSSLMSTSSAEVTEIIRSRHSTGDKRPDPPPXPE
EPSPKTKSKMKISMPKKFFKNSNNSKSYDINPQSHPSSDLPLPSPTNPPP
PARLNSMEEIKRELAEKIQQRNKRMQLRRDNNLDDIKSIASSETKDIEFL
GKKPSQVIASPAGFTSDEEDDFSD back to topmRNA from alignment at LSalAtl2s251:1093612..1101306+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000004777-700624 ID=EMLSAT00000004777-700624|Name=EMLSAT00000004777|organism=Lepeophtheirus salmonis|type=mRNA|length=7695bp|location=Sequence derived from alignment at LSalAtl2s251:1093612..1101306+ (Lepeophtheirus salmonis)
AACTTTTTGTATGACCATTTTCCCCCTTCTTATGTTAGTGAGATAACACC
GTATTAAATACCCTCGCACCTCGTTCTCAGAGGTGGTAGAAATTCTCTCT
CTCTTCTTCTCCAGCTAGCTACATACGCATATTTGTACATAAGGAATACG
ACTTAAGAATAATAATAAATAAAAAATGATATTAGTCATTTAGTGAGATT
TTAAGCCTNCTTCAATGATAGAAGCGGGAATTACTATTAAGATATACTAC
TTAAGTGTGTGGTGAATTTTTCTTCGAAAGGGGTGTAGGAAGAAGTTAAA
ATGGAGGAAGCCATCAAATTATTGGTTTTTGGTAAGTACAATTCCTTGCT
TCAATTAATGCTTTGTATAATATGTCAATTAACTTTGACTCATGTACACA
TTTTTATACCTAACTTTGATTCTTCTAACACAAACCACTGCTTAAACACA
CTTTTGTAATTTGTACATAGACCGTACTCAAGCTTCAATTATTATATAGT
CAAAATAAAAACCATTTAATTAATTATGTAAACGTCTGTCCTTCATTACC
GATTCATTTTCCAAACGCCCTTTTCCCTATTTTTACAGACTTTATCAATT
TCATAAGCTTTTTGAAGAAACAACCCAACGTGCCCAAGAGCTGGTTGAGT
CGAATCAAACGTTTGGAATTAAAATGTGACAATCTTGGATTGACATCCAA
ATCCACACCAGAATCTCCACCCGTGATTAATCTTCCTCATTCAGTTCCAG
ACTCTTCTGGGAGCAATAATTCCACTACTCTCTCTCCAAAGTCTTCAGCT
CCTGTAGTTGTTGATGTAAATTATGTCTCTGAGTTTGATAAAGATGATCT
AAGTTTGATTGGCCCGAATCTGAATGAGGAGTCCAGTACAGGGCATCATC
ATCATCTCAATTCCACGGCCAAAGGAAACGCCATAAGTAAATGAAACCAA
TAACTAATCATTATAGTCTCATAACCCATGTTTTACTTTTCTTTGTGTCA
GGCAAATGGAGCCTAAAGCCCGAGGAATGCGATAGGGACTTACTTATGGA
ACATTCTATAAAAATTGGTAAAGTCTATGTGAAAAATTTCAAAAATCTTA
TTTCTTCGACACTTGGAAAGAAAGTAGAAAAGACAGCTCTTCTCACGAAT
GATTTTAGATTCTTACTCTATAAGCCCTACAAAGCAAAGATTGACATCGT
CTTAGATATACGAGGAGCTTTAATCCAAAATAACAAGCTGAAACGAAGGA
GATTTACAATTTCTTGCTCAACCGACAAAATGGAAACGATGGAGGTATAT
TATATTGTTATTGGATAGGATCAAATGAGTGAATGTATTTCGGTCTTGGG
TTCATAATTCTTCATTTTAATAAGGGATACCCTTTTTACTTAAGTGAAGC
CACTTACAATAAGCTAGTGTTGTGTCAGTCTGTATTTAGGACTAAAGACT
GGCGTCCCGTCCAGTTCAGTACTAAGATCTATAATGTTTGGTCCTTGATG
ACGTCACTCATTTGTATTTGTTCTTTTTAAAAAAATCAGTTTAGATATAA
ATAACCAACAGTTGGCGGTTTGTTTTTCATTTTTTCCCCTCAAATTTCGA
TTACAGTTGGTGCAGAATAGTTGTCACGTACTAAGAAAATAATCTATGCA
AAATTTCATTTTTCTATGGTGTCATCTTTAAGTTGCATATCTTGTTCAAA
TTTTGAAAGGAGTCAAAAGTTCCTTAAGGTTTAAAATACAGCATTAATCA
TTATTTTGAATTAATTAATTATGATAGACTTTATTCTAACCTATAACAAA
TATGAATAAAGTTTATTTTTCTAAAGGTACCCTATGTGGCAAAGGATGCG
CGCTATAAGCGGGTCATCAATTTTTCTCTTTTTTTGTTCCATTGGACAAT
TATAGAAAAAACTGTTCAAACACTTTTGATAGGTTAAGAAAACGTCAATC
AAAATGTCTTTTGATATATATATATATTGACAAAGTAAGAAGTGTTTGCC
TTTTTCTTATAATTTGATCAGGATATGCGACCAAAAAATGAGCACGTAGG
ACAAAGCAATTATGCATAGATCATTTTCATCCCATATAACAAATTCTCTG
CAGTAGTCCATATTGGAAAAGGGTAATAAATTATACGGCTCTAACTAACT
GTCTTAAGGACCGTTCATAAGTCTGGACTGAATAAATAAGGGCTAACACA
GTAGAACAAATTAAAGTTCCTGAAACCCAAAGAAAAAAATTAGGTAGAAC
TTTTTATATAGAAATATATTCAGACACACAAAAAGTAATTTTGTTTCATA
AAATGGAAGGATTTTTTCCTCTTTAAATTGAGATTTTTTCAAAAAATCCA
TTTTCCTAACGTGGTGCCCAACAGAGCCAAGAAAACCAAAATGAAATTAA
TTTATGCATTTTGAAATATTGGCAATATATATATATATATTTAATTGACT
TTTACACCAAAAGATAGGCATAAACATGATAACTTTAAATGAAGATAAGT
GATATATATTTTTTAAAAGTTATCCATTTTGTTAAAGATGCACGAAAAAG
TAGGGTACACTTGGGGTCAAAAGGGTGTACCTCACTTTTTTTTTTAAATG
AATTTTTCTATATTTTATAAATTCCAAATTAATGCTGCCTAGATAAAGTT
GAGAGTTAACCAATACACATGAACCAATCTAAAAGCTCACCGAATTTTTG
GGACTAGCTCAAGGATGCCCAACCTTTTAATATAATGGACCGTATTGCTA
CTTGAAATATTTAAGGGGCCACATTACTTATTAAATTAAATCTCATGAAA
AATGGCTTTATAAAACCATAAATACATTTAAATTTCAAATTTCTAGGGCA
AATGTAAAATAAGGCCAAATCTAATTTTTCAAGGTCTAAGTGCTTCAAAA
AAGGGCAATATGAAGAGTCCAGGGTGTCTGCAGGAGAGAGAAGGGGGGGG
GGGGKGTTTGATTTTTTTGGCCCGTTGCATAATTTGATGGTGTGTAATTT
CTTTTCCCCAATTCGATAATTAATGAAAAGTTCTTATATTTGGAAAAACA
TTTTTGTTAATATTGGTACGAATTATGGCTTKTTCTACGTGTTTGAATGA
TATTGTGGCAATTTTGCTAAAAAATAATACTTGAAAGGAGAATGAGTAGT
GGGGGGCACTTAAATATTAAGTGGGCCGTAATATAGCCTGATGTCTCCGT
GTTGGGCATCCCTGAAYTAGCCTATAAATGTAAAATACACCAGTTTGATC
TCACCCCACTCTATTATTTTTTAGTCATACATTATAACTAATTCAATTTT
ATATAAATACTATGTAGTTTGAGGCTTCCGACGAACAAGAGCGTGACGCA
TGGGTGTATGTCTTATACCAAGCATCCAAAGGGAAAAAATCAAATGACAA
AGATAGTTCCTCCAATAAAAACGAGGATGATATATACCAAAAAGTTCAAG
AATACAACAATTATAACCTAATTGAAGATGACGACGATATGAATTTCGAT
GGCTCCGATATGAGCGATCCCGATGATGAGTTCCAAATCTATAAAACACA
AATCAGTAATCGNACCAGTTGAGCCAGGAGACTACAGACTCGTTGATGAC
GACACGGATGAAGATTTTGAGGATGATATCGATTTTGACCAGGGTGAAAT
TGATCTACTCCCATCTCCTCCAACTCCGAATCAAGCTGAATCCCAGTATG
AATTCGAAGATACTTCTTCATATACATCATCATCCTCCGATTCCTCTCTG
AGTCTATGTTCCCCAGTGGATACATCGGAGTTTATCGAAGAACCTCCATC
TTTACCACTCAAAAATCAAGGACCACTAAAGGGACCAACAGATATTCCCC
CTAGATCGAAATGTTTACTCAAGTCCAAGGTACAACCTCCCCCTTGTCCT
CTAGACGATTTTGATGACGAGGACTTCCCTCCACCACCTTCTCCGGAGCT
TCCTCCAGAACTCCCACCCAAAAATCGTACATTGGACCGGAAAGCATCAA
CCAAAAAAAAATCAAAAATACTCTCTAACAGAGGATCTCTTCCAATTGAG
AGTTCCCTTAAGCCCCATTCCAAAAGGGATTCTTCTCATGGATTCCATTC
CAACTCTAGCGAAGAACATGCAAGTCAAAGAAGCTCTTTAATGTCAACCA
GTAGTGCTGAAGTTACAGAAATAATTCGCTCAAGACATTCAACCGGTGAT
AAAAGACCAGATCCTCCACCCYTCCCAGAAGAGCCATCACCCAAAACCAA
ATCTAAAATGAAAATATCAATGCCCAAAAAGTTTTTCAAAAATTCAAATA
ATTCAAAAAGTTATGATATAAATCCTCAAAGTCATCCCTCATCAGATCTT
CCTCTCCCAAGCCCCACTAATCCTCCTCCTCCTGCTCGACTCAATAGTAT
GGAAGAAATAAAAAGGGAACTCGCAGAGAAAATCCAGCAAAGAAATAAGC
GCATGCAGTTGAGAAGAGATAATAATCTGGACGATATTAAATCCATTGCC
TCATCAGAGACAAAGGACATCGAATTCCTGGGAAAGAAGCCATCGCAAGT
CATTGCTAGTCCTGCAGGTGTAAAACCACAAGTTTTGAAGCCTAAACCCC
TTTTGGGCAACGGCTATACCGTTGGAAAAGTGACCCTCTCATCAAGTTCA
AATGTGTAAGTATCGTCCTTTGTTTAATGTCATATTTTAATTAGTCATTC
ACCAAATGAGTCACGACTCTTAATTATCATCTGTAAAGGATAGCATATCA
CCAACATGTCCGGTAAGACAAATACGTTGTAAATATGTGACATGTCAACA
TAAAAACAAGAAAATAATATTTTTTTCCACTTCATATATATGTTACATAC
AGCTCAATATTTCATAGACAATTTGGAATCAATTATAGGCTTTGTATTCA
AATTACTGGGACGGTTTAAGATTCCCAAGAGTTTAAACTAGGGGTTCAGT
TATTTATTTCATTTAAAGGACTTGTATTGACCCCGATATGGGCCCTTTTA
GATAAAATATATCAATTTGGTGTTATATAGCACTTTGTGGCTCATTTACA
GGTTTAATAAGAATGATTTATTGGTAAAAATGGACAWTAATTCTTATAGC
ACAAACTCAATTGTAATCAAAATAGTTCTAAGTTGGTTTTTTTGTTGACG
GAGAATATATATTATGACAATTTCTTATAAAGGCTTTGTAAATAATTCAT
TTGGCTATTTCACCTCGAGAAAAATATTTTATTTTTTACATAAAATCACA
CATGTTTTCATCAAAAATACTCAAAATTTACGACTGCCCCATGCAAAGAG
AAAYAAAAATATCAAGACAAGGGGTAGTTTTCCCCCATTTTGACACTAAT
ATGTACTAATTGATATTACACGTGATATACATATTTATAATTTATCTACT
TTTTTTAGGTGTTCGAATAAAAATATCTCTTCCGCAATGACACACGATCC
ACCACAAAGAGACCCCAAAAACCAAAGACAAGGAGCTAAATTAAACGAAG
TTCAACAAAAGATGGAGTTCATGAATATGACCGAAGGTTTGTAATTTTCC
GCATTTGTGACTTGTCAACATAAAAGCAAGCTACATCTATTTTTCTCAAA
ATGGAGTCTGGATTATATATCCTGTACTCTTTGACAAACTATACATATAT
TAAATGATAATGTCTGTGTGTGCGAGTCCTGGAATCACGGCCAAACCAAA
GGATAGATTTTCGTAACAAATTTCATGTATGTTAATATGGCTCAAGAGAT
GGTTGTGGTAATAATTTTTTTGGCCTTCAAGGCCATAKTGGCCGTAAAAT
AGCATTTAAAAAAAAAGAAGGATTTTTTTGACTAACACATATACAACAAG
AGATAAAAAGCTTAACATTTTATGAATGATTCTCACTGCATTTCGGTATA
TATCTTTGCACACATTTTTTTAAAGGAGATTATACGATTAAGATCTTAGG
AAAAAAAAAAAAGAAGAGAGAAATAGACAATGGATTTTTAACAATAATAT
GAAAGATGAGCAAAAGATTTGAATAACTTGAATATTTTTTATTATTTAAA
CCTTATAATCTCCTTAAAAAATAGAAGTGTTCAAAATTCATTTTAAATTC
TAAATTTCTCCTGGCAACGCTCAGCAATTCTACTCTATCTTCTTATCAAA
AAAGCCGGCAAAGAAACATACTAACTCCAACATGCAGCGAGAATAATTTC
TTAACTTTTTTTTATATTAAGTAGAAATTTTTTTAATGAATTTTTAATTC
TTCTTTGTCCCAAGCAACACCAGGTAAACCTATTCTCGTTTCTATGAAAT
TGGTCACTTTTATGTAATTTAAAGGCCATATTGGACCCGCATTCAGCCAC
ATGATTCAAAAGAAGATTTTAAACTACCTATATTCAACAATATTAGGTAT
CTACTAGTCTTGAGACTTGTTACAATATCGTTTTTTTTTCGGTTTGTTCT
TATCGGTCCAAACAAGTGTTCCAGACTGCAGAACGATTTTAATAGTTTTT
ATGAAAATTCGTCTAAATATGTACAACAATTTTTTTCAGTCTTAATCAAT
GGACCGATTTTTTTTAATATACTGATTTATTAGTTGTATGCAACAGCTGT
ATTCCAACTGAAGTGACAATAGTATTATCACCAATTTTAATAATAATTTT
TAGCAAGGGCGTTTATCCTCACAAAGGAAAGCTATGTCAGAAACGTAAAA
CTTATACGAGCATAAAAGCTCGTTTTGAAAGTCATTTATTCGCTTCTAAG
GTGTTCTATTTAACGTTACTTTTCTTAAATATCTGAGAAAATCTTGCCCA
AAATTCGTTAGCAAAAATGAATATCTCATATGAATATGTATTTGTAATAC
AATTTGATCGTTTTACATACCTATGTTAATAAATTTATATCTTTCTGAGA
GCAACTCACAACTAGTGATTCTTAAGATTATTTAAAAAAATTATGATTTT
TTCTCAATTCTTAGAGTTTATACAAGTATTTCTGCATTTATTGGATATTT
ACAAAATAGATTAAATTGTAAAAAAAAAATAATACAAATTTAAATTATAT
ATATGTATTTAAGTGAATCTTGACAGTGTATAATATAAGATATAAGATGT
ATTTTACACCATAGTCAACTATCTATTTTAAAAAAGTATGCTGCTCACTA
ATGGATGCTTAAAGAACTGAACTAGTTCGATCCGCTAAAAATCCTAGACT
AGGCGAAGATTTTGCGAGTGATTCTTAAACATGGATCTACCCTTNNNNNN
NNAATATAAAGCCAGAATATACTGAAATAAGTAGGTCAAATATTGGTCTA
CAAAAAGACAAATTAAACTCATTTTCTAGATTTAAGATTGTTTTTGTGTT
GACATAGCTCTTTTATTATTTCATAATTATGAGAATATATATCTTTTTTA
TTTATATAGGATTTACTTCGGATGAAGAGGATGACTTTTCCGATTGATAC
CTGAAAAAGACAAATGAGAAAAGTCCTTGTGAAATAAATAAGCTTACAAA
GTTAAGAATGCAAAGAAAGAATTGTTGGATATTATTATGATATACTACAT
ACAATTCAATTGAAATGTCAAAATTATTCTACCAAAGAATTTTAACTCAT
TTAAATTTATATTATTATTATCGATGTATTAATTCATTTTATTTGATCAT
TCTTTAATTTATTCTTAAATAATATAGAGTCTAGTATTATTACAT back to top
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