EMLSAT00000004785, EMLSAT00000004785-700632 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004785
Unique NameEMLSAT00000004785-700632
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s251supercontigLSalAtl2s251:1742083..1751026 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004785 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004785EMLSAG00000004785-687551Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000020955EMLSAE00000020955-729883Lepeophtheirus salmonisexon
EMLSAE00000020956EMLSAE00000020956-729884Lepeophtheirus salmonisexon
EMLSAE00000020957EMLSAE00000020957-729885Lepeophtheirus salmonisexon
EMLSAE00000020958EMLSAE00000020958-729886Lepeophtheirus salmonisexon
EMLSAE00000020959EMLSAE00000020959-729887Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780865auto780865Lepeophtheirus salmonispolypeptide
EMLSAP00000004785EMLSAP00000004785Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004785

>EMLSAP00000004785 ID=EMLSAP00000004785|Name=EMLSAP00000004785|organism=Lepeophtheirus salmonis|type=polypeptide|length=396bp
MRKDGNTPLHAELLIKYTHQVTKTFFIAPLNIIIIKILWFHASSSDYSLL
PNIDYFVTEGTILITRVSTSHGGKWTCKASNSRGYESSDVHLTVQTPLSL
RLYPPAQRVDVGKEVRIECAYRGFPLKDVYWVKDGVQLTLFPRGEIHKGD
NVSTLRIHSMDRRDKGLYQCFVEGESQILSQPGSSLSISCKATGSPLPSI
SWFVDGRPIYSGVFNKTLGKDVFLSTLDISSISASEGGHYSCVAENELGF
MTHGQRVDVYGPPFIKPMDPLSVLAASDVLIHCPYTGYPILQVKWTKNVP
PKIEPFHFKDDLQVGGRIRVSCTASLGDLPIKFEWLFNSHRLLEGEHSNG
ISITTVDAFSSSLVIPKLSTGHSGNFTCVASNSAASDTFSSSLTVN
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mRNA from alignment at LSalAtl2s251:1742083..1751026-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004785-700632 ID=EMLSAT00000004785-700632|Name=EMLSAT00000004785|organism=Lepeophtheirus salmonis|type=mRNA|length=8944bp|location=Sequence derived from alignment at LSalAtl2s251:1742083..1751026- (Lepeophtheirus salmonis)
ATGAGGAAGGATGGAAATACCCCCCTTCATGCGGAACTTCTCATCAAATA TACCCATCAAGTCACCAAAACATTTTTTATTGCTCCATTAAATATTATTA TTATTAAAATATTGTACCTTTTCCTTTTTTCTAATGGCTACATACATATA ATATAGTTTCTCCCTTTTTTTATATATATTCTAGATGGTTCCATGCCTCT TCCTCAGACTATTCTCTTCTTCCCAACATTGACTACTTTGTCACAGAAGG AACTATTCTCATCACACGAGTCTCTACTTCACACGGAGGGAAATGGACCT GCAAGGCATCCAATTCACGAGGTTATGAGTCCAGTGATGTGCATCTCACT GTCCAAACCCCCCTTTCCCTCCGATTATACCCTCCGGCCCAAAGAGTGGA TGTGGGAAAGGAAGTTCGTATCGAGTGTGCATATAGAGGATTCCCTTTAA AGGATGTCTATTGGGTAAAGGATGGCGTGCAATTGACTCTTTTTCCACGT GGAGAGATACACAAAGGGGATAATGTGAGCACTTTGCGGATTCATAGTAT GGATCGGAGGGACAAGGGACTATATCAATGTTTTGTGGAGGGNGAGTCGC AAATTTTGAGTCAGGTCTCTCAGTTGGACCTGGGAANGTAAGTTATTATA ATTCTTTTATTCTTGTTTTTTTGAAGGGGAAGRCAAAAAAAAAAAAAAAA AWGGAAYAAACTCAAAAKAAAAYTTACCRCTGCATTACTAATAAACTTTG TCTTTTGTTTGTCTTATCAAGGAAGTTTATTAATGTCCTACTCTTGTACT CCTATTAATATATTTATGTACTAAAATGTCCTATTTTTGATAATTTTTAA TAATATATGTGAACAGTGTAGAAATCCCGGTGAGCGTAAAAACCACGTTT GAGACATATAATACTAGAAACCTGTGAATAAAGACTTAAGCACGCCCGTT ACACATGAGGTAGAAGAACTGAGAAATTATTTAAATGACTTAATATAAGT TCCAAAGAACATTTTTCCTATTGTTAAGGGGAAAAAAAGTATTTATTATA CATAAAAAATCAGTGCTTTGAAATTATCAATCCTATACAAAGTATCTTTT TTAGGTAAAGGTATTCATTCAAATATTTGAATCTAGTTAATATGTGTTTT CTTTCTCTTAAAAATATAGTAAATGGCTGACAAATGACGTTCCCTAACAG GTTTCTAGTATTTCTAGTTTCTGGTATCCTATGTGTTAGATAATTTAAAA AATTGGAGTTACAAATAAAAACTATAAGCGTGAATAATATTAATCATATT ATTATTTAGAAGCCTGCATAAAGTATTAATTTATTTTGGTTAAAAGAAAA GAAGCAAACAAACGTCTTAACTTGTATTTATTCGTTCCAGTCTAGTCTGA GGACCGGCCCTCAACTATCGGTACTATGAATTGTTCGTATAAATATCAAT GGTTTATTAAAACTTATAAGATATATTAAATATGCACATACTTGCAAAAA ATACTATATTTTAATTATAATACAATATAATACGAACATATTAATTAACA ATATACCATACTTTATTCTGTTATATAACGGAATATTTAAAAAAAAAAAA GGAAAAATATCCTCATTGACATCAACAGGGATNCAATTTTACCTTCAGTC CATGCCGACAAGTGGGATCATAACTATGTAACAGAGTTGTATTTACGACG TCATTTTACCACTTTATTTCGATTTAAATACCGGCAGTCTATATAATTTT TACTTCTCAGAAGGGTAAGAAGAGTACTTTAAAGCGCTCCCACCTTTATA TATAAGTATTTTTTCGTGTTTCATTTTCTAAATAGAGAGGAATTATTAAT AAGAACACTAATATTATACAGGTTATATAAACATATTCTTTTCTTTTTTA ATTACGCTTACTGGGATTTCGACACTTTTTACATCTCTAGCTATAACTAA TTTTCTACTGCAAATTGGTATACCAAATTTGCAGTAGAAAATTGATGCAA ATTCGATATATTTTTGTAAAGACTTTGGCGTGTTTAACATTTAAAAAACC CATTTTTGGGCTCAAAATTAGTATCACATTTCATCAAGGTTGAATTATTT CATATTTTTTAACTATAACAATAATTTTTTTAAATGTTATTTGAAATATT ATTTATTTAATTTTTTTTTTTTTTTGCATCATAGTCAATGGCTATATTAA AAACTTAGTGGGTCAAGGATATCTATGAAATAAAATATTGATCGTGAGCA GAATGTGACTTAAAGCATTTCCTTTATTTGGGGCTTAATAATTATTATTT GAATAGTTTTTGAATGTTAATAATCGATAGTCAAATAAAGGAAATTTGAA CAGATTTGCATTTGGATCCAGACAGCACTCATATTTTTATAGGTATCTTT CACTTTTTGAAATTTTCAGCTGAAATTGTAGTAATTTTGCTACATGAAAG GTTTTTTAATATTGAGAAAATTTCAGAATCTTTTCAAAAAAGGATCCAAT TCAGAACAACTTTGATAGTCTCATTTTGTCATCCATGCGCAGCAGAAAAT TAATTGGGGCAGAGAAAGTCAATATTATTAAAAATTGAATAGTTTAGTAT CAGGGATGTGTGCAGAATTATTATATATATACATATATTTATTTATTTGT TTAAGGTTGGTGTAAGGATTTTTTTTTTAAATATTAAATTTTATAGCAAA TTCTTTCCTAAAATCCAGAACTTCCCACAACAAATTTTTGCGGAAAAAAT TCTATAATTCTAGGTTATGCTGGAAAAAATATTTTTTTGTGGAAAAAAAT TCAAAAATCTATAACTTTTTACCGACAATATGACATTTTCTTAGAAAAAA ATGACAAAAATCAATACCTAGCCTCAAAAAATTAAATTCTTGGAATAATA TTTCAAAAATCTTACGGCTATTTCCAAAATTTTAAATATTTTGGAGAAAC AAAAAATTCAAAAATTCACAGCTGTTAACGAAAAAATTCACTTTTTTTTC CAAAATCCATAGCTATTTAGAGAAAATAAATTTTTTTAGAAAAAAAAATG AAAAATTAAATTAAATTTTCTGGAAAAAAAAATCAAGTATTTTTTTTTTC TAAAAATTTTTTAATTTTGAGGGGGGAGGGAGCTACAGCCCTCCAGTCCA CCACCTGCGGACACCCCTGTGTATTTACATCGAATCAATACATGTATAAT CAATTTCGKCCTTTTTCCATTCCTGCCTCAATAGATTCAAAAGCAAACAT CATCTCGACTTTCGATCATCAAGTCCTTCAGCCTGGCTCTTCCCTCTCGA TCTCATGCAAAGCAACCGGCTCACCACTACCCTCCATATCCTGGTTTGTA GATGGTCGTCCCATTTACAGTGGGGTCTTCAACAAAACGCTAGGAAAAGA CGTCTTTCTTTCCACTCTGGATATTTCCTCCATATCCGCAAGTGAAGGAG GACATTACTCATGTGTTGCAGAGAATGAACTGGGCTTTATGACCCATGGT CAAAGAGTGGACGTCTATGGGCCACCTTTTATCAAGCCCATGGATCCCTT ATCCGTTCTAGCGGCATCTGATGTTCTTATTCATTGTCCTTATACTGGAT ATCCCATTCTTCAAGTAAAATGGACAAAAAATGGTGAATATGCATCTTGA TATTTTGACCAACATTTTGTGTAAGGCACAACAACTTATGACTTAGGGAA TATATTTTGGGGACATTCACAAATCACGTGCCCACCTTGGAGGGAAGTGA GAGGAATATTTTGTGGGTTATCATTAATTTGATCCGGTCCAGTCCAGTAT TAGAACAGGTCCTATTTGACCTTAACATCTTTTCTTTGAACTGTCGGAAC TTAATATCGGTCCTTAGAACTTTCAATTCTTAGGAACAATCCTTGACTGT AGAGTTTTGGTATTTTTCTTCAAATTTCAATGGTGTATTAAGTCAAATAA GATATATAATATATTTATCAAGAGCTTTTCCCATATTTTGCAGAAAATAT TCCTGTTTGCATTCAATTGCAATATAATAGTATCATATTATATTTTACTT AGTTACATAACGTAATAATTAAAAAGAGGGCAAACAGCCTCGATGACGTC ATGGGGTATCAATTTGAACTTCTTTAAGGACCAACAAGTGGGACTAGACT GTACGCGACCGAGACGACACTCAAAGTAAGGCCTGGAACATCGAATTTCT TTGTTGGGTAAGGGAGGTAGATTTGAAAGCACTTAGACCTGAATAATATA GCAAGATGCTATAAAATGACGTCAAAGGGGACAGGGGAATACAATTCGAA AAAATATAAAATTGATTTTTTTAAATATACTAAATTTGTGTCGTCTATAA TTGTTTGTTGAGCAAAGAACCACGAGGTATATGAATGACAAAGGTAACAA TGGGTAATTTTTGATTAACAAAAGAAAATTACTAACATTTGTTAATATTA CTTTTTTACAAAAAAGCAATTAAATTTATGCAAATTAAATAATTGAATTT TATATCTAAAGCAAATAATATTATCTACAGCATCTATAAATAGATAAGCA ACAAAGTAATGCTATTGGAGCAAAAACTTGCAAAAATTTATAAGGTAACT ATCCAAAAAAATATACAAATGAATGAACCAAATTCAACTGTTACGAAAAA GCTCATTATCTTCATTATTTCAGATCAAAATGAGTAATACATATTTTAAA TTGTAGAGAATAGTTGTAAATTAACTTTTTGGTGCACGGAAAGAAAATTA ACATTGGAGGGAAAAATTGACCGTCAATTTGAAAAAAACAATCAATCCGG TTTTAGACATACAATATATAAACATTCGTTAATTAGTTTTGTAATATAGG ATCCAACCATGGATTTATTTTTATGATGAATTGGAAATATCCTTACATGA ACTTTTGAGAGCTATTTGCATATTTTAACATTATATTTTTCTTCAATAGT CTTTTAATTTACACGTTTGACTTCCCTTGTTATAAAAAAAACAAAAAAAA CGAGACATCTTTCCACGCCTTAAATCCCTCATAAAAAAATACTAAGCTAG AACATTAATTAAACAAACCCTCACAACTTTTGATAAACATTTAATTTATT GCGGAAATTTAGTAAATCTCCATATCTTGTAACAAAGAACATTCGATGCA TACTACCCGCGTTTATTTGGATTCACGTGGATCCTTTTGAAACTAATTGA TTAGTGTTAAAACATAGTCCAGGCTCATATTTTTAATAAATATTTCATTT TCATAATGTAGCTTTATTTAACGTTCTTGTGCCACATATGTATATAAAAT TTGTTTTTTTTTTAATATTAATTTCACAGGAGAGATCCTTCCCGTAAATG AACGACAGCGAGTCTTTGAGTCCAACGCGTCCCTTCAAATCCAAAATATT CAATTGGCGGATAAAGGAGAATATACTTGCACTATATCCAACGAAAGAAG CGTTTCTGCACGGGAAAACTTTGAATTCTCTGTTGCTAGTAAGATTTATA TTAATACCATAGATAAATAAATATTTTGAGCAAAGGTATCAGCTGATAAA AGTTATATAGCATGACGTAACATATAAGTGTTTTTCTTACATAGATAAGA TGTAATTCCGACCAGAGAAGAGATATTCCACTCTGATTGACTTTGATGAT GTAATATAAAGTTAAGAAATGACCTTTTTTTACTTCAGCTGACGTTGAAC TTATAATACACTTTTACATACAAAGATTGGGTAATAATCAGTAACAGGGG CGTTCGCATGATTATATCCAAAATTGAAACTTTTTGAAAAAAGTTTCATA ATCCATAGCTATTCACAAAAAAAAAATTTTTTTTTTTTTTCCAAAAAAAT TCAAAAATCCACAGGTATTGAGAAAAAAAAATTTAAAAATTATAAAAACT CATACATCATTGTTATTCCTGTTCTACGTAATTTCCCCGAATAAGTTTAT TTTTACTAAAATAAGTAGCTTATTTTTGCGTATTTTCATCTTGACCAACC AAAAAAGTCTAGTAAGAAGTAAAAATCCCTTAATTTGGGAGGAGGGGCTG CAACCCCTCCAACACATTCCTTAACCCTCTGTAGGTGAACAACATTTTTT ATAATAGGGTTACTGAACTAGCTAAATAAGAAGCCCCAAAAAACAAACAT ATTTACTTACACGATAAATAGTTTATTTCTANNNNNNNNNNNNNNNNNNN NNNNNNNNNNNTTTGGTATTTCTTTTCATATNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNAATTTKAAAATTAWAAAAACWCATACATCATT GTTATTCCTGTTCTACGTAATTTCCCCGAATAAGTTTATTTTTACTAAAA TAAGTAGCTTATTTTTGCGTATTTTCATCTTGACCAACCAAAAAAGTCTA GTAAGAAGTAAAAATCCCTTAATTTGGGAGGAGGGGCTGCAACCCCTCCA ACACATTCCTTAACCCTCTGTAGGTGAACAACATTTTTATAATAGGGTTA CTGAACTAGCTAAATAAGAAGCCCCAAAAAACAAACATATTTACTTACAC GATAAATAGTTTATTTCTATTTTTAGATATCATATCAATGTTGCAATCTT AAATATAAGTTAAAATGCTTAAAAATACTTGTATAATAATAAGACATTCA GAAAAATANNNNNNNNNTTTTAAAATAATCTTAACTGCATGAGTTTGGGA CTTTAACAAAATATAATTCTTTATTCTTATAGTAAATTTTTTAAACTAAA TTTAATTAAAAACTAGAAGAGTCCAAGAAATCAAAAAGTAACGACGTTTA AAGCAAAAAATTTATGATATTCATTCAGTCTCAATTTTAAAAAAAAATAC TTAATATACGAATAAATTCTAAACAAGACTTTCTCAAGATGAAAAAAAAA AAAATTGCATARAATCAGATCTAACTTTTCTGAAGCATACTGAAATGTAT TTACAATCAAATGTAGATTTAAAGAGTATGAAGCATTTTTATAAGTCTTG GCCTTTAAAATATATCAGTTCACTAACTTAATAAAAACTTTATACCAAAT ATAAATTCGTATCTCAAGTAGAGATAGAACGTGTCTTGGATCCAAAGTAC CGTGCATGGTATAATTAAACTTGTATTAAACGAAAATATGTGAGACCCTC CGGGTACTCGAGCACTTATGAGTCTTAAAAATGATTTGAATGATTTTTAG GATCTTCAAAATCTTATAGTATTGTTTTGTAAACATAAGATGGGTCTAGG ATCTAGATTTGATGTACTCTGGTATATTATAAGTAAAATTGTATGATACG GTATTCAAACAGACTTATGTTACTTGAACTTTTACGGATCTTAAAAAAAA TATGAGGATTTTTCTGACATGAAAAAGATGATACTATTGCATCATACTTA ATCCTAGTTCTTTAGAGAAAAAAAAAGATAAAGTATATTTATCTTAATTA GTGGTTTGAGTTACATCTACATCAACAGCTTCACCTGCAATAATACCTAC TAATTATCTTCTAATTACAATAAGATGGGGTTTTTATTGTTTTTAGTAAC TAGTATGTATCTTTAATCAAAATCAAATGATTATTAAGGCCCCCAATTCA TTATAAAATGCTAATAAAGTTAGAGACATTTTTTGTTTAGGATTTGGATT AAAAGTTCAGGTTCACGAAATTTACTCGAATGGTTATGTCTAAAATTCTG AACCGACCTAGATTTGTCTTATCTTTAATCTGAAGATATTTCTGTATCTT TTTTTTCCCCTACAGTTTTCTGTAGCTGATGTTCCTTTTATTCTGCTACT GCCTTGACTATGCTGAACTGCCTATAAAAACCCTTTGTTATCTCAATGTA TTTATTTATTTATGATTACTAGACTCAGAGGAAATAATTCCTTGTCCCCC ACACGCATAATCAACTTTTTTCTATCTTTCTACTATTATTTTACAGTACC TCCAAAAATTGAGCCCTTTCACTTCAAGGATGATTTGCAAGTTGGAGGAA GGATTCGAGTGTCATGCACTGCCTCTTTAGGGGATCTACCCATTAAGTGA GTCATTTAGTTTTTATTATTTATTTGTAAAAATACAGCTCATTGAAAGGG GGAGAAATAATATAATATAAATTGATCATTTTAATATTTGCAATAATGTT TTTTCGGCAACTTTGAGTCTGTTTATCTGTTTTAGAGCTGTGCTTCAGTT ATTTTTTCGAACCGAGTAGATGATACTGTTTATGGAACTGGTAAATCTGT AGCTATAAACCAAAAAATATTTTTTTGAAAAGAAGAAAAAATCAAAATTC TACAGCTGTTCACAAAAAAAAAAAATTTTTTAGGAAAAAATTTCAAAAAT CAATAATTATAAACAAAAATTTCAAAAAGATTCAAATGAACCACTACAAT GTACAAATATTAATCATGTACTCTACCTTTAAGTCACCTGACTTATAGCT TTTCCATAGGGACTCCAGATTTTTGCAGAGTTTAATAGCAGAGTTTTTTC ACATTCATTGTTCCTGGTACAAATAGTCAGAACCTATCTCTAATATGTAT ATAGTATAGCCATATTAATATATATATTTTAAAATTGTGCAAGAGAGCAA AAAAATTAAATTTTTCCCTAGGGAAATTTATTACCAAATATAGTTTTTTG TTTTTACTCATTTGTATATATGTATATTTTTTGTTCCTTTCTTTGTTGTA GATTTGAATGGCTTTTCAATAGTCATCGTCTCCTTGAGGGCGAACACTCA AATGGCATTTCCATCACGACAGTGGATGCCTTTTCCTCTTCGCTTGTCAT ACCCAAATTAAGTACAGGGCACTCTGGTAACTTTACATGCGTTGCCTCCA ATTCAGCTGCGTCTGATACGTTTTCCTCTTCTTTAACTGTAAAC
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