EMLSAT00000004825, EMLSAT00000004825-700672 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004825
Unique NameEMLSAT00000004825-700672
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s254supercontigLSalAtl2s254:381063..384691 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004825 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004825EMLSAG00000004825-687591Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000021143EMLSAE00000021143-730071Lepeophtheirus salmonisexon
EMLSAE00000021144EMLSAE00000021144-730072Lepeophtheirus salmonisexon
EMLSAE00000021145EMLSAE00000021145-730073Lepeophtheirus salmonisexon
EMLSAE00000021146EMLSAE00000021146-730074Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777078auto777078Lepeophtheirus salmonispolypeptide
EMLSAP00000004825EMLSAP00000004825Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004825

>EMLSAP00000004825 ID=EMLSAP00000004825|Name=EMLSAP00000004825|organism=Lepeophtheirus salmonis|type=polypeptide|length=137bp
MILTSTDRKKSDDSPPGVTLPHPETLTFPLNFLFFLGRFTASTLLIEENT
SEVIMLWTGKPLSLLLTVFIPLELMSQLPSIYSGIKPVALTDKDQTFLLS
HAVLRYXTVYFSHLSGTSYAYGGSTDETMIYAATIER
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mRNA from alignment at LSalAtl2s254:381063..384691-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004825-700672 ID=EMLSAT00000004825-700672|Name=EMLSAT00000004825|organism=Lepeophtheirus salmonis|type=mRNA|length=3629bp|location=Sequence derived from alignment at LSalAtl2s254:381063..384691- (Lepeophtheirus salmonis)
ATGATCTTAACATCAACTGATCGTAAGAAATCGGATGATTCTCCTCCAGG
AGTAACACTTCCCCATCCTGAAACTCTTACTTTTCCCTTGAATTTCTTGT
TTTTCCTTGGCAGATTCACTGCATCCACTTTACTTATGTAAGAAATACGA
AGTAATTAATAGGACAACTTGTATTACTAAACACAGAGACTAGAAAACAC
TGTTTTGGGGCCATAGGACATTGAGTCATATCACTTTATAATATCATAAT
ATTTTTGCAACTAGTTTAAACTTATTTTTCTTGACATTATGAACAAAGGA
TTATATATACAAGGAAAAAAATTTCAATTAATAAAAAAGTGTATATTTTA
TAAATCAAAAAACTTGTAAACTTTGATCTAAACTACTTATGTTTTTTCTC
ATGAAAAATTTGCCACATATTTAATTATAACTAATATTGGTATAATAAAG
AGTATTGTACATATTTCATAAGTTTTCTTGTATTTTAAATTAAATTCATC
AAAAGAAAAACAATTTTTTAGGTATTGTCAAAATTTTCCAATTAGTCTTG
ACATTTTTTATCTGAGAATGTGTTTACAGATAGTTTACTCAAGAGCCGCC
CTTTAATGCTACATGTCAAAGGAAACATTAGACAAATTACCTAATGTAAT
CAAAATAGCCTGACAGGGTTGAATGGGTGAATTTAATATTAAATGTAAGA
GAATAAAAAAGAATCGCGTAATGAATGTATTAAAGACTTTAAATATTTTA
TTGGGTTGATTTATACTTTATGTGATACGAATAATTATTAATTGCATAAT
CTATTTTTACTCAATAAGACATTCATTACACAATTATTTTTATTATNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATATTTAAAWAAAAYT
ATWTAATWAAAAAAKAYAAAAATGTTATTTCTTACTCGTTAAACTCCAAG
GAACTTTCCAATTTGAGCAAACAAATATCATTATTTGTTCCTTTAGTGGC
ATAGTCTTCATGGTATTTGATGAAAGACACATTTGCAATCTGCTCAATCC
CACTCACTTTTGATAAGTTATGCTCCCCAGCAACGATTTGAACTTCTTCT
GGCTCAAAATTTTGACAACAATGTGCAGCTGTAAGCACTGTATCCTTTAA
AGACTCCAATGAACTCATAGAAAACTCTAAAATCGACATATGTACCTTAT
CAATGATTGAGCCTCCACAGAAATGAAATCCAGATTTTAATTGAAAGGAA
ATTTGATATGGGATAGAGTTTGGTTTTACTGCATTCCCACCAACAATTTT
TCCATCGCCCTGAAACATAATGTCCTTTTTTTTCCTTCGTTGTCCCTCAG
TTTTTAAACTCAAAGCCAACAGCATACATGTAATATGTAGTATCATAATC
TTCAGCTCCATCTTTCAAAAATGTCAAAAAAAGGTGTTSAACCAACTGTT
TGTAACAAATTGTTAACGTTAAGCAAATGTATTTTCTATTTATAGGTATA
TTCATTATATATTTATCACAAATTAGAAATATGTATATTAAGTTTATCAT
GAAATGTAATCATTCAGTGTTTATCGTGAGGTGATAAAAAGTTCAAGGAT
ATTAAGAAATAGGTATGTAAATACATACAAACATACAAGGGCTAAACTCC
CATACTATAGCAGAGAGGCATTCAATACAAATGACTCTTTTAGATAATAA
TATCAAGGATTCAATAGGGGGGGGGGGAAGAGAGATTTAAATGATTTTTG
TTCTCAAATTAAGTGCGTCAAGATTTGGTAATATCGATTTGAAAAAACTT
TAAACGACTTCAAAAGTTTCATACACATTCTAGGATATCAGCTAGGTCTC
AAATTAAAGTGTGTACCACATGGTAAAATATCTTCAAGTACCTCCATTAT
GATTAAACTATATACCCAGAAGACACAAGAATCTTCACAAAACGTGTTTA
CTGTCCTATTCAATTATTGAAGGATAAATTATTTTTTTGAACTAAATATG
TATAGGTTCGATTCATATTTGCTCTTAGATAAGAAAATATACATTAAGAT
TTTAAAGGCAATTCCTAGGTCAAATGGAGAAATTGTAATAATTAAAGTAT
ACTGTTTGCATATACTAAATCTCTGCAACTCCATCTGACCAAATAAAGGA
ATATTAAAAAAAATATATAAATGCATAATAAAAATTGGAAAAATTAATGT
ACAAATCCAAATTCTCAAATAGATTCTACCACCCCAAAAATAGCTTTACA
GGCTTCAAACTTTTCTAAAGCCCGTTTTTTGATTATCTCCAACAGAAAAA
GTATTTGGGTTTAGGGAGAGAGAAATATTCGCCGTAAAACGGAAAAGCAT
AGTGTACACGTATGATAGATGTGATAACACATATTTAATATATTGTTTTT
GTTAACTATACACATTTTTTTTAAGCCTAATTTATATCTCCAATATTATA
ACAATAAAAAAACAACGTATTGCTCAGGCTGAATTTCAACACATTTAGCT
ATAATATGGACAGACATTGACCTAGAAAAACAAAATCCACGAAAAGTTAT
TCAATCTTTATAGCATATAACATAGTTTTACAAGATTGTCAATCAAAAAT
CAATCAATCTTGATTTAAATTTTGAGCAATCAGAAAGTAATTTGAGGTTA
TTGGTTCAAAACATTATCTCTAATTAAATATTTTTGGGAATTATTGGTAC
CTTTTTGCTCATGGCTGMTACCAATGGAATCCTATATTCTGCAAAATTAT
CAGAAAAAAAGAAGTTGAGTGAAATACCGTTCTCTTACCAAATTTAATTC
CAATACTAGAGAGGAAAACACTTCTGAGGTAATTATGTTATGGACAGGGA
AACCATTATCACTGCTACTTACTGTTTTTATACCTCTTGAACTAATGAGG
TTCAAATCGTTTGGCGAAGACGATATCTCCTCTAAGAGTGAAGATGAGCA
AAAGAGAGCTCTATCTAAAATAATCTTCTAAAGAAGTTTAGATACGATAT
ATATACATATATAACCATAACATTTTTCTTCTGAAATTGAAGTTTTCTTT
GGACAGCAATTTAAAATTATTTCACATTTCATTTCTTAGTCAATTACCAA
GTATTTATAGCGGTATTAAGCCCGTTGCTCTAACTGACAAGGACCAAACA
TTCCTCTTATCTCATGCAGTCCTTAGATATGAMACTGTCTACTTTTCACA
CTTATCAGGAACAAGGTATTTTTATATTCAAAATATATCTTGATAAACTA
TTTTATATTAGATTGTAGTTATGCTTACGGTGGATCTACCGATGAGACCA
TGATCTATGCTGCTACTATCGAAAGGTAA
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