EMLSAT00000004894, EMLSAT00000004894-700741 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004894
Unique NameEMLSAT00000004894-700741
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s257supercontigLSalAtl2s257:333074..340050 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004894 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004894EMLSAG00000004894-687660Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000021406EMLSAE00000021406-730334Lepeophtheirus salmonisexon
EMLSAE00000021407EMLSAE00000021407-730335Lepeophtheirus salmonisexon
EMLSAE00000021408EMLSAE00000021408-730336Lepeophtheirus salmonisexon
EMLSAE00000021409EMLSAE00000021409-730337Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776498auto776498Lepeophtheirus salmonispolypeptide
EMLSAP00000004894EMLSAP00000004894Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004894

>EMLSAP00000004894 ID=EMLSAP00000004894|Name=EMLSAP00000004894|organism=Lepeophtheirus salmonis|type=polypeptide|length=1663bp
MVNSNIERIQWHSGLLLILLPTLILAHLSLLGQEEDPLENGAILSYSESL
TLVCPPLSEWRINGTKPASQESTLSFSSPPQSTLKIECLSSNESEGSVSY
SFLYLSQLNETLXPPPPISSLSLKPKTVLTYEETTSLTCSLDETQDEGVS
YSFVWLKNGEIVSESSGSTFLLRNVTQSATYGCLLKDKDLSSLAYEETHV
LVPSKIISPKENEQTIYLLPGSSYKEVCTANTPSVKWIQNGEALSVSSEF
ILQNVSEDTDLICIADNELGQDERKIHLIVVSPSVGPETQKINIYQDESK
DLTCKAEIDERLISSSLLHYKWYLNGSLLENYGKDHFRIDSASDGDISGN
YTCVIETPVEDVKVEYNVLVVSAPVIDSQFSKTLKVLKKSPYPSVQCSAH
GDPEPRVSWIWSVDDKEVIVNESTLLSLNTSLAIDSTIFTCQAESVHGLT
QRNFTLRAFEPTFVLQNDTTISVNASGKVILKCESAVDPRLESSSSITWL
KDNKPLQHFITKDDEVLIPYLHLDHGGMYSCLTRTPLESVLVVQKLVVLV
ETPVIKLPVNVKRVTEGSDVSITCNASGVPHPSIHWKKDADNIKVSDGEN
LIIRHIGVEDTGHYSCLAVNEYGSKQESLSIEVYNKTTVAVDKETLISET
SDLVVLECPVRLDKRLNIVSITWYKDGLNESISNETKLVIRNATKEDQGT
YICRVETPVDVVNQTLRLTVLSEGPSFLSTEEDIRTLEGTNVTVNCQANG
LPIPKISWTNNGVQILKGDDRRTVSPLGDLTIHYVSLNDQGNYTCTATNI
YGSISTQSTIEVILRSKMATDFKKVKNVIKNVRENVVLDCDVVYDSRLDR
EIELLWKKDNLPIRINRSKYIAADNSLKVYNLDISDQGTYECQVNTPFES
ISSKTALIVSGEPPKIVSEFKKVMLDEGEDLRLECLVRGVPRPTLVWYFQ
DAPLTNAYVHEIATASKVFRESRVIVKNVTKANDGVYQCRADNDYGTGVA
KFSRVNVLRRTRATISESGEISIHAGTNLKIPCNIEKDQMNQITNIQWVK
PFKVGAKDRIDFGVDGSLSIQDVQKRHSGEYKCLVTTILDKANSSVTVSV
NVNAPFITSFTGENQMIFQGESLSLFCNSNGIPKPIISWNFNKTDTKIDN
NAEFKILNAIASDSGSYECVAKNQYGETRKIIFVRVIQXPPVDEEVAVDD
GEPADLYCIKPNNYVHIQWRDPKEQNISDYDSETGVLHFKSVNQENIGEY
SCIISLNNGRSRAIKRHLRIKPEIIMSRNNTLVEITEGKNLTLECNVLPG
IGAKRLWKHNENIIIPGGNREVSNRGGLLTIEDIRQDEDSGKYVCIAIAD
FGKDTIEYTVHVDPIPVSKKEVSCTESHSNPIFLFDVIRTGNESVLIRWE
FPDLFNTSCYEALFLTWWTDEKDSPFSEEFFSFSTRKTTLTGLDENLHYY
VQINLKEKTSSKSIFGETRSFYLRDLPFESISHLDSNETSSDFIALLSST
SIVILISILFVLLILIAAVSFLYYKNKLVCCGHHFGNDSKIRKRTNIYNP
DFRDFQLIQSPARGIDDFMQNLAPQWPEPEPPAKLGGDEDDESAAFIKIQ
QPSQNNMQQSNNSQAHHHHHHNRHPSQNNSISSSWSSLFNMPIDPATVRM
NANNKSRFSGFVT
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mRNA from alignment at LSalAtl2s257:333074..340050+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004894-700741 ID=EMLSAT00000004894-700741|Name=EMLSAT00000004894|organism=Lepeophtheirus salmonis|type=mRNA|length=6977bp|location=Sequence derived from alignment at LSalAtl2s257:333074..340050+ (Lepeophtheirus salmonis)
TGCCTATACTATATATTATGAATGATGTAGTGGGTAAAAGTAAGTCTGAA
AAACATATCGTTGAAAATGAACAGACAACTTTTATCCTCTATTTTTTATT
ATTGTTTTTCTTTAACTCCCTCGTTCATTTTCTTTTTTATGGAGTGCGTG
TAAAGGCAAAGATTGAGTCGTCTCGTGAGTACTACTGAGTTATAGTGAGG
ACTAAAGAGTGAGGAAGGAGCTGAATGGAAGAGCGCGTCCAAAAAGGAGG
GAGGKAGACGTAGTTGTAAGCGCTCCGTCATCATCAAACTCACCATCATC
TTCTTCATCCAAGCCCACCTTAGTTGCTCAGTCATTGCTGTGTCTTCTGG
ATTGCTGCGGTTATTCGCTCTGCTCTTTCTTCTCACTCTCTCTCTCTCCC
CCTGGAACATCCCTTCCCTCATCATTCATCAAGAACGAGTTCTAATAATT
TCTTCTGTCTGGAGTTCTGGAATGTTTTTCTGAGCCCTGAAGCCTCTCCT
TTTCACGAGCATTTGAAAAGGGGAATGAGAAGAAGAGACATCCATTGTCA
TTAACAGCTATGGGTAGGATCTCTCNATTACTAGAGACCAATGTATTTAC
TTGAGCAACCACCCTTTTATTTCTTCTTTGCAGTAAACAGTAATATTGAG
CGAATTCAATGGCACAGTGGACTTCTCCTCATTCTTTTGCCGACCCTGAT
TTTGGCACACCTATCGCTACTGGGACAAGAAGAAGATCCCCTTGAAAACG
GTGCAATTCTTTCCTATTCCGAATCTCTAACCCTAGTGTGTCCTCCCCTC
TCGGAGTGGCGCATCAACGGCACAAAGCCTGCCTCCCAAGAGTCAACTCT
ATCCTTTTCCTCACCCCCTCAATCCACGCTCAAAATCGAATGCCTCTCCT
CCAATGAATCGGAAGGGAGTGTTTCTTACTCCTTCCTCTATTTATCACAG
CTGAATGAGACATTGGMCCCTCCGCCGCCCATCTCCTCCCTTTCTCTCAA
ACCAAAAACAGTTCTCACATATGAAGAAACTACTTCTCTGACCTGCTCTT
TGGACGAGACGCAGGATGAAGGCGTCTCATATTCCTTTGTATGGTTGAAA
AATGGAGAAATAGTCAGTGAGTCCTCAGGCTCCACGTTCCTTTTGAGAAA
TGTGACTCAATCCGCTACCTACGGTTGCCTTCTCAAAGATAAAGACTTGT
CCTCTTTGGCCTATGAGGAAACTCATGTACTTGTACCTTCTAAAATAATA
TCTCCGAAAGAAAATGAACAAACTATCTACCTCTTGCCTGGCAGCTCCTA
TAAAGAAGTGTGTACTGCAAACACACCTAGTGTAAAGTGGATTCAAAATG
GAGAAGCGCTCTCTGTTTCTTCTGAATTCATACTCCAAAATGTTTCTGAG
GATACGGATTTGATATGTATTGCAGATAATGAATTAGGGCAAGATGAAAG
AAAGATTCATCTCATAGTTGTTTCACCTTCCGTGGGTCCGGAAACACAAA
AAATCAATATCTATCAGGATGAATCCAAAGATTTAACTTGTAAAGCTGAA
ATAGATGAAAGACTGATATCTTCCTCCCTTCTTCATTATAAATGGTATTT
GAATGGATCTCTTCTGGAAAATTATGGAAAAGACCATTTTAGAATTGATT
CAGCTAGTGATGGCGATATTTCAGGAAACTATACTTGTGTCATTGAAACT
CCAGTTGAGGACGTAAAGGTTGAATATAATGTCCTAGTAGTATCCGCACC
TGTAATTGATTCTCAATTTTCTAAAACCTTAAAAGTACTCAAGAAAAGTC
CTTATCCATCAGTGCAGTGCTCTGCACATGGGGATCCTGAACCTAGGGTT
TCTTGGATCTGGAGCGTCGACGATAAGGAAGTCATTGTGAATGAGTCTAC
GCTTTTAAGTTTAAACACATCATTAGCGATTGACTCTACGATCTTCACAT
GTCAGGCTGAAAGTGTACATGGACTCACTCAAAGAAATTTCACTCTAAGA
GCTTTTGAACCAACTTTTGTCTTACAAAATGATACAACAATAAGTGTAAA
TGCAAGTGGAAAAGTTATCCTAAAGTGTGAATCCGCTGTAGATCCACGAC
TTGAGTCTTCATCATCCATTACTTGGCTCAAAGACAATAAGCCTTTACAG
CATTTTATAACAAAGGATGATGAAGTTTTGATTCCTTATCTTCATTTAGA
TCATGGAGGAATGTATTCTTGTTTAACAAGAACTCCTCTTGAAAGTGTTT
TAGTAGTTCAAAAATTAGTGGTTCTTGTTGAAACTCCAGTGATTAAACTT
CCAGTAAACGTAAAGAGAGTTACTGAAGGCTCTGACGTTAGTATAACTTG
CAATGCATCCGGTGTTCCACATCCATCTATTCATTGGAAGAAAGATGCAG
ACAATATAAAAGTTTCAGATGGTGAAAATTTAATAATAAGACATATTGGA
GTGGAGGACACTGGGCATTATTCCTGCCTCGCCGTCAATGAATATGGAAG
TAAACAAGAGTCTTTATCAATCGAAGTGTATAATAAGACTACAGTTGCTG
TTGATAAAGAGACGCTCATATCTGAGACGAGTGACCTTGTTGTCTTGGAA
TGCCCAGTCCGATTGGACAAGAGATTAAATATTGTTTCCATAACATGGTA
TAAGGATGGACTCAATGAGTCCATATCCAATGAAACAAAGTTAGTGATTC
GAAATGCTACCAAGGAGGATCAAGGGACCTATATCTGTAGGGTGGAAACC
CCCGTAGACGTTGTGAATCAAACACTTCGATTGACTGTTTTAAGTGAGGG
TCCTTCTTTTCTATCTACAGAAGAAGATATTAGAACATTGGAGGGAACTA
ATGTAACTGTGAACTGCCAAGCCAATGGATTGCCCATTCCTAAAATATCA
TGGACTAACAATGGTGTACAGATATTGAAAGGGGATGATCGGCGTACAGT
GAGCCCTCTTGGTGATTTGACAATTCATTATGTGAGTTTGAATGATCAAG
GAAATTATACTTGTACTGCAACTAATATATACGGTAGTATTTCCACCCAA
TCCACCATTGAGGTCATTCTACGCTCCAAAATGGCAACCGATTTTAAAAA
AGTAAAAAATGTGATTAAAAACGTTCGTGAAAACGTTGTATTGGACTGCG
ATGTAGTATATGATTCACGCTTAGATCGTGAGATTGAACTCCTTTGGAAG
AAGGATAATTTACCCATCCGCATCAATAGAAGCAAATATATAGCTGCAGA
TAATTCTCTCAAAGTTTATAATCTTGATATCTCAGACCAGGGAACTTATG
AGTGCCAAGTGAATACACCCTTTGAATCCATAAGCTCTAAGACTGCCTTA
ATTGTTAGTGGAGAGCCCCCAAAAATAGTTTCCGAGTTTAAAAAGGTAAT
GCTCGATGAAGGAGAAGATTTACGCTTGGAGTGTCTTGTCAGAGGKGTTC
CTCGTCCTACATTAGTATGGTACTTCCAAGATGCTCCTCTTACTAATGCA
TATGTTCACGAGATTGCTACTGCATCAAAAGTTTTTAGAGAGTCTCGTGT
TATTGTGAAGAACGTAACTAAGGCTAACGATGGTGTATACCAGTGTCGCG
CAGATAATGATTACGGAACAGGAGTTGCTAAATTTTCCAGAGTAAATGTT
CTTAGACGAACACGTGCAACCATATCAGAGAGTGGAGAGATTTCAATTCA
TGCTGGTACTAATTTGAAAATTCCTTGTAACATTGAAAAAGACCAAATGA
ATCAAATTACCAATATTCAATGGGTGAAGCCCTTTAAGGTCGGGGCGAAA
GATCGTATTGATTTTGGTGTGGATGGATCTTTAAGTATTCAAGATGTTCA
AAAACGTCATTCTGGAGAATATAAGTGTCTTGTCACCACTATCTTGGATA
AAGCCAATAGTTCTGTGACTGTTTCTGTGAACGTGAATGCTCCTTTCATT
ACATCTTTTACGGGTGAAAATCAGATGATTTTCCAAGGAGAAAGTCTTTC
ACTGTTTTGTAATAGCAATGGTATACCCAAGCCCATCATTTCATGGAATT
TTAATAAAACCGATACGAAGATTGATAACAATGCTGAATTCAAAATACTC
AATGCAATTGCTTCTGACTCGGGAAGTTATGAATGCGTTGCAAAGAATCA
GTATGGAGAGACTCGAAAGATAATATTTGTTAGAGTTATTCAAGYCCCGC
CAGTAGATGAAGAAGTAGCTGTAGATGATGGGGAACCGGCAGATTTATAT
TGTATTAAGCCCAACAACTATGTACATATTCAATGGAGAGATCCTAAAGA
ACAAAATATATCTGACTATGACTCAGAAACAGGAGTTCTTCACTTTAAAT
CCGTGAATCAAGAGAACATTGGTGAATATTCCTGCATTATTTCATTAAAT
AATGGAAGATCTCGAGCTATAAAGAGGCATCTGAGAATAAAGCCTGAAAT
AATTATGAGTAGAAACAATACTTTGGTTGAGATTACTGAAGGTAAGAACC
TTACTTTAGAATGCAACGTTCTTCCTGGAATCGGAGCTAAGCGATTGTGG
AAACATAACGAGAATATCATTATCCCTGGTGGGAATCGAGAGGTTTCGAA
CAGAGGTAAAGGTTAATACTTATCTCAACTCACGCCATTATTTATTTTGA
TTATTTTATTACAGGGGGTTTACTGACTATAGAAGATATACGCCAGGATG
AGGATTCTGGGAAATACGTTTGTATCGCTATAGCAGATTTTGGAAAGGAT
ACGATTGAATACACAGTGCATGTGGATCCGATTCCAGTGTCAAAAAAGGA
AGTTTCCTGTACAGAATCTCACTCTAACCCTATTTTTCTGTTTGATGTAA
TCCGAACTGGAAATGAGAGCGTTCTCATTCGTTGGGAGTTTCCAGACTTG
TTCAACACTTCATGTTATGAGGCATTATTTTTGACGTGGTGGACAGACGA
AAAGGATAGCCCTTTTTCAGAAGAGTTTTTTTCCTTTTCAACCAGGAAAA
CTACGCTTACAGGACTGGACGAAAACTTGCATTATTATGTCCAGATTAAT
TTAAAGGAAAAAACAAGCTCCAAGAGCATATTTGGAGAAACTCGTAGTTT
CTACCTAAGGGATTTACCGTTTGAGAGTATTTCCCACTTGGATTCGAATG
AGACATCCTCAGACTTTATAGCATTGCTATCTTCCACCTCCATTGTGATT
CTGATCTCTATACTCTTTGTTCTACTCATTTTAATTGCAGCTGTATCATT
TTTATACTATAAGAACAAACTCGTGTGCTGTGGTCATCACTTTGGGAATG
ATTCAAAAATTAGAAAAAGGACTAATATCTATAATCCTGACTTTAGAGAT
TTCCAGCTTATTCAAAGTCCTGCTCGAGGTATAGATGATTTTATGCAAAA
TCTTGCACCTCAATGGCCAGAACCTGAACCACCAGCTAAATTAGGTGGTG
ACGAGGATGATGAATCTGCTGCTTTCATCAAAATTCAACAGCCCTCTCAG
AACAACATGCAACAATCCAATAACAGTCAAGCTCATCATCATCATCATCA
CAATCGTCACCCAAGTCAGAATAATTCTATTTCTAGTTCCTGGTCATCTC
TTTTTAATATGCCTATTGATCCTGCTACTGTGAGGATGAATGCAAATAAT
AAATCCAGATTTAGTGGTTTTGTAACTTAATGTTTAGATCAATGATAATT
ATTGTTCACTTCATACAAATGATTACTTTTTCTTTCTTTTTTGTAACTAT
TTAATGAGGACATTTGGATTGTCTTTTTTTTGTGATGGAAATCCGCGCGC
ATAACAATTTTTGTTGAATTAAAAAAATGAGCTTTTTTTTACTACTTACA
AAGTTATCTTATATTTTTTGTATTACTTCATAAATAAATACATACAGTTA
TATAATAAAAATCATTTACAAATTAAATGGCACTTGATTATACTCTTTGG
CAAAATTGCAGGAATAGGATTATATTTCAACATATATTAAATCAGTGGTT
GAAAGGTTTTGGTGAGATGAATAATATATTATTCAGAATAAGCGTGGATT
CATAGCTGTTACAAGTAGTATTGTGTCGGKCCTTATTTGGGACGAAGACT
ACAGTCCCTAAAACTTATAAATTTCGGCCCTTGATTACGTCACTTATCTT
TTTTTTTATCAGTTCTAGCACTGACAGTACGAAGGACCGATACAACACAC
GTTATAAGCTTATAAGTTTCATGGAACGAATTTGTCCGGGGATCCATCCC
CAGTCATTGGTTTGATTATATTCTGTATCTCCATCCAGAGTTGTAGTATC
CCCCTTGAAATTTCGTCTCTTGAACAGCATCCATTTACATGGACCCACGG
TTTTGATGGAGCGAGCATTGCGGATGCTTCTTACTCTTTTTCGACTTTTT
GTAAACTTTTTTATTTCTTTTCTCATTTTCTGACCCTTGAAGGCAATTAG
CGTACATGAAGAGGGATCCTTTGAATTTTCGAAATGCTTCATGGCATCGA
TAAGAGCCCGTTCTTCCAAACTGATTTCCTTGTCCTTCGTAGTGTCTCCC
CTTAGTACTCTACATATCTCAATTGTACGAGCTACCTTCGGATGATCATC
GAAGAAGAAGACGGGGAAGTTGGAGAGAGAGGATTCATCGATGATGTTTA
GTAAGTCTTTGCAAGAGGTGATGGTTGCACTTTGGCCACAATCTATTAAA
AAGGTGGATAGCACTAAAAATATAATAACTGGATGTCTATACACACTCAT
GGTTAGGCCTGGAGTGAGATTTTGCTCTTGGATTTGATTGCCTTTATAAC
ATCCGTTTATAAGTTGATAATGACTAATTGGGATTATCATTCTTCTTAAA
TGTATGTTGGAAGGGGATTTTCTTTCGTTATGTGGTGTATGCAGAAGTAA
TTAAGTATTGCTTCAGGCAACAGTTCTTGAGAAACAAGAAAAGTTGTACA
TATTTGCAAAGATAGAGCGCCCACATT
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