|
|
Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s260 | supercontig | LSalAtl2s260:1298922..1302318 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000004958 >EMLSAP00000004958 ID=EMLSAP00000004958|Name=EMLSAP00000004958|organism=Lepeophtheirus salmonis|type=polypeptide|length=689bp
MASQSVCVETSTDNAIIEVAYDGTEILQPPLSLGEHLAKQASKIDFSNTT
IEADEKMEQDQESDESGESSESEDSPTDGKTDWPWENVRNKLKDALTELS
VLSDVLAVSSKELKDHKRYMILDGPFKADAHDLRPYACLVAKKKSLDGPA
RILLQGAENLKHIASSTPDGTSAGGASAGSESIKDATNEFHIELLRLRQN
WRLKKVSNNILGDLSYRTAGSHFKQSGVFEVTKXASTAASTPAAEGEEKR
SALNVTVPSELEGIAFIQVTIQKESDQMMNANLTSFTNLPGSSFGNGSPN
NSGNTSQEVHWQKKLEQAQNVLFCKELFAQLAKEAIQLKATIPHMVVGTQ
IIASLFTDIQLIISLCHSSSSDRSKRSMEETSKNSGKDGSNSSNQQQSSQ
SQKDHSHVLEHSLHQLLRQTHARNINPEGPSLSSAPVGVSKKRRIAGPSA
CDRQSLLEMAKHETILERVIAQAQHVVLRLRTMFVLDTIGRDMKDPLITC
HWSTLSSPTCXSVKVMIVTSGYDSINKTQLFIKVEEKRLTVVCRDGRVLK
FSHEPQELRDFILCQIAQHQVNGVQALAKVTGWQVISSSSNLGSGVVEPL
GNAAGVLLSSPTGDRFISVRPSPITQTSVWVSSAPCKDYFPSAVVKDHKK
WENLPESFKEVRLDRMDGKNLLSKLELLMAALVSNVGIS back to topmRNA from alignment at LSalAtl2s260:1298922..1302318+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000004958-700805 ID=EMLSAT00000004958-700805|Name=EMLSAT00000004958|organism=Lepeophtheirus salmonis|type=mRNA|length=3397bp|location=Sequence derived from alignment at LSalAtl2s260:1298922..1302318+ (Lepeophtheirus salmonis)
CTGCGCTTGAATAATAAGAGCTTTAAAATCAATGAAAACATTGACTGTGA
AATTAATCTAAGCTGATTTGAAGCCGGGTACAGCTAGGAATTGTTCCATC
CATCCTAGGGGATATTCCTTCCTGGAGACTTATTAACTGTAGTCTATACT
AATAAATATGGCATCTCAGTCTGTATGTGTCGAGACCTCGACGGATAATG
CAATCATTGAAGTGGCCTATGACGGAACGGAGATCCTTCAGCCTCCTCTT
AGTCTTGGGGAGCATTTGGCTAAACAGGCCTCAAAAATTGACTTCTCAAA
CACGACAATTGAGGGTAATTAATATAAGGAGTAGTTCTTTTAATTATTCC
TCTCATTGATTAATGTTTAATTTCAGCAGATGAAAAAATGGAACAAGATC
AAGAGTCCGACGAGTCTGGAGAATCAAGTGAATCTGAAGACAGTCCAACT
GACGGAAAAACAGACTGGCCCTGGGAAAACGTTCGAAATAAGCTCAAGGA
TGCTCTAACGGAACTAAGTGTGTTAAGCGATGTACTTGCAGTTTCCAGTA
AGGAGTTAAAGGATCACAAACGCTACATGATCCTGGACGGACCCTTTAAA
GCAGACGCCCATGACCTGCGTCCATATGCATGTCTTGTAGCCAAGAAAAA
AAGTCTAGATGGACCTGCTAGGATTCTCCTTCAAGGAGCAGAGAATTTGA
AACATATAGCCTCTTCCACACCTGACGGAACGAGTGCAGGAGGAGCTTCA
GCTGGATCTGAATCTATTAAAGATGCGACAAATGAATTTCATATTGAATT
ATTACGCTTAAGACAAAATTGGAGACTTAAAAAAGTGTCAAACAATATTT
TGGGTGACTTGAGTTATCGAACTGCAGGGTCTCATTTTAAACAGTCGGGT
GTTTTTGAGGTAACTAAGNCTGCCTCCACTGCTGCTTCTACTCCTGCGGC
TGAGGGTGAAGAGAAACGGTCTGCTCTTAATGTAACAGTGCCGTCGGAGT
TGGAAGGGATTGCTTTTATTCAGGTTACTATACAAAAGGAATCGGATCAA
ATGATGAATGCCAATTTGACCAGCTTTACAAATCTACCAGGTAGCTCCTT
TGGCAATGGATCCCCGAATAATTCAGGCAACACCTCTCAAGAGGTTCATT
GGCAGAAGAAATTGGAACAAGCTCAAAATGTTCTATTTTGTAAGGAGCTC
TTTGCTCAACTGGCCAAAGAGGCAATACAATTAAAAGCTACTATTCCTCA
CATGGTGGTTGGTACTCAAATAATTGCCTCTCTATTTACTGATATACAGC
TCATTATCTCATTATGCCATTCATCTTCCTCTGATCGAAGTAAAAGATCA
ATGGAGGAAACCTCCAAGAACAGTGGAAAAGATGGATCTAATTCTTCAAA
TCAACAACAGAGCTCTCAATCACAGAAAGATCATTCTCACGTTTTGGAAC
ACTCTCTTCATCAACTCCTTCGCCAAACTCACGCTCGAAATATAAATCCA
GAAGGTCCTAGTTTGAGTTCTGCACCTGTTGGAGTCTCCAAAAAGAGACG
CATTGCCGGTCCTTCAGCTTGTGATCGTCAATCCCTTCTTGAAATGGCTA
AACATGAGACCATATTGGAAAGAGTGATTGCTCAAGCACAGCATGTTGTT
CTTCGACTCCGAACCATGTTTGTTCTAGACACCATTGGACGCGACATGAA
AGACCCTCTCATAACATGCCATTGGAGTACACTAAGTAGTCCAACTTGCK
CTTCCGTCAAAGTTATGATCGTTACCTCAGGCTATGACAGTATTAACAAG
ACTCAATTATTCATTAAAGTAGAAGAGAAACGACTAACCGTTGTTTGTCG
AGATGGCCGAGTTTTGAAGTTTAGTCATGAACCCCAAGAGCTACGAGACT
TTATTCTTTGTCAAATTGCCCAACATCAGGTAAGATATCTCACAAGAGCT
TAATATAGACAGAGCCTGTGTTTATTCATTGTTTTTTATACTCCCTACTT
CTTTCTTAATAGGTGAATGGAGTTCAAGCTCTGGCTAAAGTGACTGGTTG
GCAAGTGATCTCCAGCTCTAGTAACCTTGGTTCAGGAGTAGTTGAGCCAT
TGGGTAATGCAGCCGGAGTTCTTCTTTCAAGCCCTACAGGGGATCGATTT
ATCTCTGTGCGTCCAAGTCCTATAACTCAAACCTCTGTCTGGGTATCTTC
CGCACCTTGCAAAGATTATTTCCCAAGTGCTGTTGTAAAAGATCATAAGA
AATGGGAAAACCTTCCAGAGTCCTTCAAAGAAGTTCGGTTGGATCGCATG
GATGGGAAAAATCTTTTAAGTAAATTAGAACTTTTAATGGCAGCACTTGT
GAGTAACGTTGGAATATCTTAAAAAACATCGTAATTATTATTTAATTAAT
TATCTCAATCATGGAAAGAAAGGAAAAGGAAGAAAAAAAAAGTTTTATAT
AGTTATCAAAATACAAAGTCCTTTATTTTTTTAAACCACCTTCTTCAGGA
ATGACTAGAGACAACATTAAAAAAGTGATATATTTCATCCTTGTCATAGA
CTGCGAGTTGAGTCTGACAAGCATCACATTTCACTGAATTATACAGCTCT
TCTTCAGTCTCAATTCCCATCTTTTTTTTATTCTTAATGGATTTCTTAGA
GTCTGTATATGCGAGTCCCTTGGAAGTATCAACGGTACAGTTCATGACAA
ACATGGCTCSATATTGATTCTTGTACACATCATGTCTTTGACAATCTAGG
CACACAACAGCAAAACAGGCAGGGCAATTGAGGACTGCATCGCTATTGGG
CAGTGGTTTTACTTCGGATGGAGCTGCCTTTGTTTTTTTATTCTTTGAAC
TTTCATTTTGATAAGATCGTCGTATGCTATCCACCCATGCTTGATCACGG
TCGTCTTCTCCGGGATCGTATAATAGTTCATCATTGCTTTTTTTATCTTT
GATCCCGGATCCACTTTCCTCTTCTTCATCCGAGTCAAAGTAGATGTCAT
CGTAGGTCTTTTTAGTACTAGTAGAAGAGTCATTAGCCGATGCGCTGTTG
TTTGAGGTTGAAGGCATAAATGAGGATTTGGCATCCTGAGCTCGACTCTC
AAATTCAATCCTCATTTCCTTCTCAAAATCATCCAACTCCTCCTCCTCTT
CTTCTTCAGGAGGATCATCTTGTCTTCTCGTCGATGATGGGCACTTCTTA
CTCTCCATCCGTTCCATCAGTTTTTGGATATTAATTTTCCCATGGGAATC
ACAGGCTTMAGCTTCTTCGTCATCGGATGYAGAGTTTCCACATCCCTCAT
CATCGCTAATTTCCTCGTCTCCCCGATAGTCTTCTCTTAAGTAATCGTCC
ATTGTTTGTTTACTAATAATACTTGATCAATGATTTACACCAAAACA back to top
|
