|
|
Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s260 | supercontig | LSalAtl2s260:1311421..1314272 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000004961 >EMLSAP00000004961 ID=EMLSAP00000004961|Name=EMLSAP00000004961|organism=Lepeophtheirus salmonis|type=polypeptide|length=871bp
VERFYSXLLSHTVIIPPVIYQGAQVRTFPLPVHFSSTNFKNAMTQLCLIL
LSISLFGGESVYARGILPDVSNEGIVHRFSTYKDVALFHYNLPSELSKAT
FEFAAFQNRPDCPSIWIITCIQHGSYPVINPDNGTFAKDYYIKRSELDCI
RIPSAYESHSNSLYPVFNPLPGPWFTVSYISPDTPTEGKLSLLKGECRYS
VGSIGIWNKADNIQSVFLGDQTLKTSSRYSYFKILVPDSVPHFKIILSNC
KSLVKDISRPWFKEESCVELAALRARAVPFSYDQNIDQQFALNISTQDVV
ELNESRPFKSNAYYYILLISNGKISIDLKIEYGNCGEPGLYGETQRNWFL
EEKGLVWNANKTSGFREPEAGFQIFHFPENDPNDHFLPSAALVLDSPDKQ
NCVSRFELTRIDEGREFYTVFLLQGRRWYTNWITVRNTEPIFTRFDINQF
MDLGATLVIHLEVDINKLSYKKEYSVLICLSHNREPMISTDGMMSCHEDE
KTILNVNDTLGNLYIPFPEYGAWFLGSQILSPSEEMSSGISLMVSLDVRL
QPCGYRLNEKSEDLCGPNGLCYLSNDGLSHYSACKCFSGYRGWTCDDATY
AFSKFQQVITTLLLTMSXLAFXPAVLFAMYYKLWTQSLAYFTTMLFSTFY
HMCDEEAQEKSLPHSMDSLCNNLYVNNEVLQFCDFXSXTLSFWITIIALS
KFNYKLVSFLNTIGVILIAVLVQYNRTGAQVFAIPIPLGLFLLLISYGIK
GKSRGRIVKPNTRCLYFMIPGISCTLFALALFVLIETSETYAYVHSAWHI
FMALSLCFFVPLCKERTKNEKDLILSGVVQTSCSEEVVHDSSTTTQISTI
SNALQTNPSPLPRPAVAKQLE back to topmRNA from alignment at LSalAtl2s260:1311421..1314272+ Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000004961-700808 ID=EMLSAT00000004961-700808|Name=EMLSAT00000004961|organism=Lepeophtheirus salmonis|type=mRNA|length=2852bp|location=Sequence derived from alignment at LSalAtl2s260:1311421..1314272+ (Lepeophtheirus salmonis)
GTAGAACGTTTCTACTCTMCCCTACTCAGTCATACAGTCATAATACCACC
AGTTATATATCAAGGAGCGCAAGTACGTACGTTCCCTCTACCAGTACATT
TTAGTTCTACAAAGTACAATGTCAATATCATTTTTGAGATTCTATACCTT
GAGACTTTAAAAATAAAGGAAAAAAATGAGCACCATAGTATTTAACAGTG
TCGTTTTATTTTTCATTGTAGTTTCAAGAATGCTATGACCCAGCTTTGTC
TAATCTTGTTGAGCATTTCTTTGTTCGGTGGAGAAAGTGTGTATGCCAGA
GGTATCCTACCAGATGTGAGCAATGAAGGCATTGTGCACCGTTTCTCAAC
ATACAAGGATGTTGCCTTATTCCATTACAATCTCCCTTCTGAGTTATCCA
AGGCAACATTCGAGTTTGCTGCTTTTCAAAACAGGCCAGACTGTCCCAGT
ATTTGGATAATAACCTGCATTCAACACGGTAGCTATCCTGTTATTAATCC
TGATAACGGAACTTTTGCAAAAGACTATTATATAAAGAGATCTGAATTGG
ATTGTATAAGAATCCCTTCTGCCTATGAGTCTCATTCCAATAGTTTGTAT
CCGGTGTTCAATCCCCTACCTGGACCCTGGTTTACTGTATCCTATATTTC
TCCAGACACTCCGACTGAGGGGAAATTATCTTTATTAAAAGGGGAATGTC
GTTACAGTGTAGGATCCATTGGAATTTGGAATAAAGCGGATAATATTCAA
TCTGTGTTTCTGGGAGATCAGACACTCAAAACCTCTAGTCGCTACTCTTA
TTTCAAAATACTTGTTCCAGATTCAGTGCCTCATTTCAAAATAATCCTAT
CCAACTGTAAGTCTCTTGTCAAAGATATTTCACGACCATGGTTTAAGGAA
GAATCATGTGTGGAACTGGCAGCTCTAAGAGCAAGAGCTGTACCATTTAG
CTATGATCAAAATATAGACCAACAATTTGCTTTAAACATATCAACTCAGG
ATGTTGTAGAGTTAAACGAATCCCGGCCTTTTAAATCTAATGCGTATTAT
TATATTTTACTTATTTCCAACGGAAAGATTTCTATAGATTTAAAAATCGA
GTATGGAAATTGTGGTGAGCCAGGGCTTTATGGCGAAACACAAAGGAATT
GGTTTCTAGAAGAAAAAGGTCTTGTTTGGAATGCTAATAAAACCTCGGGG
TTTCGAGAACCAGAGGCTGGCTTTCAAATTTTTCATTTCCCTGAAAATGA
TCCAAATGATCATTTTCTTCCGAGTGCAGCATTAGTTCTGGATTCTCCTG
ATAAGCAGAACTGTGTGTCTCGATTTGAATTAACGCGGATAGATGAAGGA
AGGGAATTTTATACGGTTTTCCTTCTTCAAGGCAGAAGATGGTACACAAA
TTGGATTACTGTGAGAAATACTGAGCCTATTTTTACTCGATTTGATATAA
ATCAGTTCATGGACTTGGGAGCAACTCTTGTCATTCATCTTGAAGTAGAT
ATTAATAAACTCTCATATAAAAAAGAATATTCTGTCCTTATTTGTCTTTC
ACATAATCGGGAGCCCATGATTTCGACAGATGGAATGATGAGCTGTCATG
AGGATGAAAAAACCATTTTGAATGTAAACGACACCCTTGGTAATTTGTAT
ATTCCTTTCCCTGAGTATGGAGCCTGGTTTCTGGGCTCTCAAATTCTAAG
TCCAAGCGAGGAAATGAGCTCAGGTATATCTTTAATGGTGTCTCTTGATG
TTCGACTTCAGCCTTGTGGATATAGATTGAATGAGAAATCAGAGGACCTT
TGTGGGCCAAACGGCCTTTGCTATCTATCCAACGATGGACTTTCACATTA
TTCGGCCTGTAAATGTTTCTCCGGATATAGGGGATGGACCTGCGATGATG
CCACTTATGCATTCTCTAAATTTCAACAGGTCATAACAACCCTACTTTTA
ACCATGAGTAWTTTAGCCTTTCYCCCCGCCGTACTCTTTGCCATGTACTA
CAAGCTTTGGACTCAGAGCCTTGCCTACTTTACAACTATGCTTTTCTCAA
CTTTTTATCATATGTGTGATGAGGAAGCTCAGGAAAAGAGTTTGCCTCAC
TCCATGGACTCATTGTGTAACAATCTCTATGTCAACAACGAAGTCCTCCA
ATTCTGTGACTTTTMCTCCGSGACCCTCTCTTTTTGGATTACAATTATTG
CCCTTTCCAAATTTAATTATAAACTAGTCAGTTTCTTAAATACCATTGGA
GTTATACTCATAGCAGTGCTTGTTCAATATAATCGGACTGGAGCACAAGT
TTTTGCCATACCCATACCCTTGGGACTATTTCTTCTCCTTATTTCATATG
GGATAAAAGGTAAATCACGTGGAAGAATCGTTAAGCCAAACACTCGTTGT
CTATACTTCATGATCCCAGGAATTTCCTGTACACTCTTTGCTCTTGCTCT
ATTCGTATTAATTGAAACCTCAGAAACGTACGCCTATGTCCATAGTGCAT
GGCATATTTTCATGGCTCTTTCCCTCTGTTTCTTCGTTCCTCTTTGCAAG
GAAAGGACAAAAAATGAGAAAGATTTGATTTTAAGTGGAGTCGTACAAAC
TTCCTGCTCCGAGGAGGTTGTTCATGACTCATCCACAACTACTCAAATAT
CTACCATTTCCAATGCATTACAAACAAATCCTTCACCTCTTCCTCGACCA
GCAGTGGCCAAACAACTGGAATGAGTCATTATAAAATGTGTATCATTTTG
TAATTATTGTATAATATAGACTGATTTTAGTATTGTTTTAAGTCACCTAT
AATTGAATAAATATCTAAGGTTGATTAATTCATTATACTATTTGTAGTTC
TC back to top
|
