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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s260 | supercontig | LSalAtl2s260:1319020..1323791 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000004964 >EMLSAP00000004964 ID=EMLSAP00000004964|Name=EMLSAP00000004964|organism=Lepeophtheirus salmonis|type=polypeptide|length=1005bp
MIVPGFRGRTRYALHFYRVLQGLQSGFLVIISIFAALLTVVSLRSLTRIS
DPLTSPGVLDHLSLLMGVHERTAVVVWELDDWCSNVFVFIYQSQPSDGSF
YITKEHRETLLPSLLGDEERTPPNGSLLTLEEKIAEXASASKKHLPILHS
RGIVFSDTSQHTRFPILIRLSSKAFIHPNKEAVLLSLDSFLRNESTFEYR
EETSMGLLANEDKRALQWFAINLLRGTFFHSDFSISQTVLILNVREHDAE
LTFAINSSVIKSFTSFPHVNYRTYKLRAYGHLIQLLTLKFPGLGLYSGRR
GMYGLKKELKESLRSPCMNPIVNGTWEIEGSLITVRGLIPPQYEMVKEKD
GPFAGKKVNKPVANISKCKSKAVAYLQKVMLPQQHNQTEQFKKVFTALGR
VRPIYLEGLFLEKLFEQGLTLPVRGGIIGCRQIMESLKYSCKSPNTEQPF
SCTDMIYLITILQELLGLKSLSCSLYSPRNISKEYPIPNPEPMPNITGQR
RRLNNRRDATAPNLVMIIHEYSNKIKKYSPIPKPPPILTAVSAMQRSHLS
PRISSDFTKIIIMSESETSTDLHDIPTELSLLKNCFFGKLEGILCFFLKN
KLLPEYFPFIKLVDAEPKIEDVIYYKVKYLEGKEEYLMXHASLDYFARDG
AIKMSCHGFPILFKQFRIKGKIRIALMPFKTNPISFGGIQFSFIETPLIS
YRLNVTALPFRRLIDNKMISFINSKMVFPGRVIIPISSMDPMKYRSFIPI
GLFALRLKRLTVGEEHEDTDIEEEKWCEFLLEVFQGHQVMISLIPFGGKA
IKKTNSKELLGHLSFDVMKELGGEENRFKKLEATKKLELIEEGVLSLLSI
DMIWLPTEGAPGEDTAYSGPTVALFCIYIYSCNNLVESEGEDSEIESCPD
TFIELSSGGEDDFFSCIYRSHVVLNSRQPEFNYEIIIKCNRDWMTKNISL
TVCKXSPDGKYIYGGINLCLADIEKAPIVRDVRSINSKVPYSTMTLSASI
KKLIH back to topmRNA from alignment at LSalAtl2s260:1319020..1323791- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000004964-700811 ID=EMLSAT00000004964-700811|Name=EMLSAT00000004964|organism=Lepeophtheirus salmonis|type=mRNA|length=4772bp|location=Sequence derived from alignment at LSalAtl2s260:1319020..1323791- (Lepeophtheirus salmonis)
ATGATAGTCCCTGGCTTTCGTGGGCGAACTCGATATGCCCTTCATTTCTA
TCGAGTTCTCCAAGGACTCCAATCCGGATTCCTCGTCATCATCTCTATTT
TTGCAGCACTTCTCACAGTCGTCTCTCTGAGAAGTCTCACTCGAATATCG
GATCCTCTCACTTCCCCTGGAGTATTGGATCATTTGTCCCTTTTGATGGG
CGTTCATGAAAGAACGGCCGTTGTCGTGTGGGAACTGGGTAATTTTTTGG
ATTTTTTTTCTTGCAATAAATTGACAACTTTTTATTTGATTTGAATTAAT
TGAAAATGTAATTGTTCCTAGATGATTGGTGCTCCAATGTCTTTGTTTTC
ATTTACCAAAGTCAACCCTCTGACGGATCCTTTTATATTACGAAGGAACA
TCGTGAGACGCTCCTACCAAGTTTGCTAGGTGATGAGGAGCGTACTCCTC
CCAACGGATCCCTACTCACATTAGAAGAAAAGATTGCAGAGRTAGCCTCT
GCCTCGAAAAAACATCTTCCCATTCTTCATAGTCGGGGAATTGTTTTCTC
AGACACTTCCCAACATACTCGCTTCCCCATTCTCATACGCCTCTCATCAA
AAGCTTTCATTCATCCCAACAAAGAAGCCGTCCTTCTCTCATTAGACTCA
TTTCTTCGTAATGAATCCACTTTTGAGTATCGGGAAGAAACTTCCATGGG
CCTCCTCGCAAATGAGGACAAAAGAGCGCTTCAATGGTTTGCCATTAATT
TACTCCGTGGCACTTTTTTTCACTCAGATTTCTCCATCTCTCAAACAGTC
CTTATATTAAATGTACGAGAGCATGATGCGGAATTAACCTTCGCCATTAA
CTCCAGTGTCATTAAATCATTCACTTCCTTCCCCCATGTTAATTATCGCA
CTTATAAGCTTCGTGCGTATGGACATTTAATACAGCTTCTTACACTCAAG
TTCCCAGGACTGGGGCTCTACTCTGGACGGCGAGGGATGTATGGCCTTAA
GAAAGAACTAAAGGAGTCATTAAGAAGCCCTTGTATGAATCCTATTGTGA
ACGGTACATGGGAAATTGAGGGATCTCTTATTACAGTGAGGGGTCTTATT
CCTCCTCAATATGAGATGGTGAAGGAGAAGGATGGACCCTTTGCGGGCAA
AAAAGTAAATAAACCTGTGGCTAATATATCAAAGTGCAAATCCAAGGCTG
TTGCCTATTTACAAAAGGTAATGCTACCCCAGCAACACAACCAAACTGAA
CAATTTAAGAAAGTATTCACGGCCCTTGGCCGAGTAAGACCCATATACTT
AGAAGGACTCTTTTTAGAAAAGTTATTTGAGCAAGGACTCACTCTTCCCG
TTCGTGGAGGAATCATTGGATGCAGACAAATAATGGAATCCCTCAAGTAT
TCCTGCAAGTCACCTAATACTGAGCAGCCATTTTCCTGTACGGACATGAT
TTATCTAATTACGATATTGCAGGAGTTACTAGGCCTGAAATCCCTTTCCT
GCAGTTTATATTCTCCTAGAAACATATCGAAAGGTATGAATGGAGACTGG
CCCTTTGCGGCGGCTTTTTWTATATATCAAAATGGTCTGTGATAACGTTA
TTACATGTTTGACTTTACGCTTACAATAATTAATACTCCCCACAACTCCT
TAATATGTCATTTAAGCTATTATTAACACCTTCTTCTGTATATTTTGTTT
ATAGTGTTGATATAGGAAAGAAACATGGATTGCTTTGATAATATGTATAA
ATGAGTCGTACTGTATTTTGAGAACCAAGATGTTTGTCAAACAAAATTTG
ATTTAAAATAAGAGGCATGAAATGCAGGATTCTATTTCATTAAAATATGT
TGTTTTTTACATACTATACTAAGATTCAAGTGATCGAGACGACTAATGGG
GAAAGAAATAAAGAGCTGGAGGAAAGCGTGTAGACTTAAGGAAGAATGTT
GTTGAAGGATTCACTGCTTGCCATGACAGCAACCTGACTTTTTCTCTGGA
GATTTGGATCCACAGGGCTTACTAAAGGGCTTGTTCAGCTCATGATTGCA
GTTAGAGTACCCCATTCCGAACCCGGAGCCAATGCCAAATATCACTGGCC
AGAGACGTCGTTTAAATAATAGAAGAGATGCGACGGCGCCTAATTTGGTG
ATGATCATTCATGAGTATTCCAATAAAATAAAGAAATACTCACCAATCCC
TAAGCCTCCTCCAATTTTGACGGCAGTGTCGGCGATGCAGCGATCCCATC
TCTCTCCAAGAATTTCTTCAGACTTTACGGTCGCTGCCATTTTGTCGTAT
TATTTATGTACGTGTATTTGTTTTTATTTATCTAGAAACGAGTTGATAAA
AAAAGTGATGCAAATTTAGCTATTTAATATAGCTATAAATAATGAGTAAA
TATAGTACCCCCCCCCCCCCCCCCCATTGAAACTTGTATAAGAAAGTTGT
ACAAGTTGTCATTTCTAGTCTTCAAATCCATTACTTAATTACAACATTGG
TCATTCTAACTATTAACCTGGTTAATCATTTCATTTTGATCTATTAAAAT
ATTCAAAAATGATTCAATTAATATATGGAATATTCAATTATTGTATTATC
CCCATTCCAAGTACTGTGAATCCTTCACTTAAAATTACTCAGCTCATTTT
CTGGTTGCAACTTGTACACAACATATTTAACAAACAAAATCAACCAGGCG
TGCAGTTTATTTTACTGACCATCCCAAACATGTCTATGGAATCAATTTAC
CGGACTGTTTGAAATATTTCTGCATTAATATAATTTGCTACATTAGGATG
ATTGATTTTTAAATATATTAATGATTAATTATGATCATTTTTAAATACAT
CTCTTTTCTAATGGGCCTTGTTTGACTCTCCATAAACTGATGATTGAATT
AATAATGGTTTAGATGACATTAAAGTACCCATAAATTGTTGAGACTGGGA
ATTCGGACACCTTCTACCTCTAGCTCTCATTTTTTTATTTCTATGAAAAG
TCCTTTGATATCCAAAAAGTTTGAACAAGATTACAAACTTGTTGGACTGA
TGAGTAATCCTGATAAATTTGCCTCTCAGTAGAGTCAAGTCCATCCAACA
TCCTTTTGAGTTCCTGTTACTTTAGTAAAGTTAATTTTTTTGGTAAACGG
ACTAAATAGAAAATTATCATCATGAGCGAGAGTGAGACCTCTACAGATTT
GCATGACATCCCAACGGAACTATCATTGCTCAAGTATGAAGTATTGCTTG
ACTTACAGTATCCAAAATGAATTGTTTAATATTGCAGGAACTGTTTTTTT
GGGAAATTGGAAGGGATTCTCTGCTTCTTTTTGAAGAACAAGTTACTTCC
GGAATACTTTCCATTTATTAAGTTGGTGGATGCCGAGCCCAAAATTGAGG
ATGTGATTTACTACAAAGTCAAGTACTTGGAAGGAAAAGAAGAATACTTG
ATGGRCCACGCCTCATTGGACTACTTTGCTCGTGACGGAGCCATAAAAAT
GAGTTGTCATGGCTTTCCAATCCTATTCAAACAGTTTCGAATTAAAGGGA
AAATCCGCATAGCACTCATGCCTTTTAAGACGAATCCCATCTCCTTTGGC
GGAATACAATTTTCTTTCATCGAAACTCCTTTAATTTCATATAGGTTGAA
TGTAACGGCTCTTCCTTTCAGGAGGCTCATCGATAATAAAATGATCAGTT
TTATAAACTCCAAAATGGTATTTCCTGGTAGAGGTAAGGTTTTTGCATTC
TTTTTGAACTTAAGCCTCTTTAATAACCTTGTCCTTATTTAGTTATTATT
CCCATATCCTCTATGGACCCCATGAAGTATCGCTCTTTTATCCCAATTGG
TTTGTTTGCTCTAAGACTTAAGCGATTAACTGTGGGAGAAGAACATGAGG
TAGGACCCTGCTCTTCTTGTTTCGGAAGGCGNCCAACCCCTTAGTTATCA
TACTCAAGTATCTCTAGGAACTTCTATGATTGAATTTGAGATGCCCAAGG
ATACGGACATTGAGGAAGAAAAGTGGTGTGAGTTTCTACTGGAGGTCTTT
CAAGGCCATCAAGTGATGATTTCTCTCATTCCCTTTGGAGGAAAGGCTAT
TAAAAAAACAAATTCTAAAGAATTGTTGGGTCATTTGTCATTTGATGTGA
TGAAAGAGCTTGGAGGGGAAGAGAATCGTTTCAAGAAACTTGAAGCCACC
AAAAAACTTGAGCTGATTGAAGAAGGCGTTTTAAGTTTACTCTCTATAGA
TATGATCTGGCTTCCAACTGAGGGAGCTCCTGGGGAGGACACTGCGTATT
CTGGCCCTACCGTTGCCTTATTCTGCATCTATATTTATTCGTGCAACAAT
CTCGTGGAGTCTGAAGGAGAGGATTCTGAGATTGAATCCTGTCCCGATAC
TTTTATTGAGCTTAGTAGTGGAGGMGAAGATGATTTCTTTTCGTGCATCT
ACAGAAGTCATGTTGTTCTCAATTCCCGACAACCTGAATTCAACTATGAA
ATCATCATCAAATGTAATAGGGATTGGATGACGAAAAACATTTCCCTTAC
AGTTTGCAAAMACTCTCCTGACGGTAACTTAATACAAATCCATTTATTAC
ATGATGAACAATTTACACTTTTATTTTAGGGAAGTACATTTATGGTGGGA
TTAATTTGTGTTTGGCAGACATAGAGAAAGCTCCAATCGTTCGTGATGTC
CGCTCTATCAATTCTAAAGTACCATACAGTACAATGACCTTATCTGCTAG
TATCAAAAAACTTATTCATTGA back to top
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