EMLSAT00000004967, EMLSAT00000004967-700814 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004967
Unique NameEMLSAT00000004967-700814
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s260supercontigLSalAtl2s260:1326845..1328814 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004967 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004967EMLSAG00000004967-687733Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000021757EMLSAE00000021757-730685Lepeophtheirus salmonisexon
EMLSAE00000021758EMLSAE00000021758-730686Lepeophtheirus salmonisexon
EMLSAE00000021759EMLSAE00000021759-730687Lepeophtheirus salmonisexon
EMLSAE00000021760EMLSAE00000021760-730688Lepeophtheirus salmonisexon
EMLSAE00000021761EMLSAE00000021761-730689Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780648auto780648Lepeophtheirus salmonispolypeptide
EMLSAP00000004967EMLSAP00000004967Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004967

>EMLSAP00000004967 ID=EMLSAP00000004967|Name=EMLSAP00000004967|organism=Lepeophtheirus salmonis|type=polypeptide|length=503bp
MAGSSSNSKTTLSLPTKITSTGSATGNPRNKTALQPGCSLMDWVALMNSG
KDLTGTGGRMIKVTKEELKKHGPEDKEPWIALQGLVYNISHYKRFHPGGV
DELLRGAGKDATKLFNEVHPWVSFQSMLSKCLVGKLVEKILPPIIPPKKP
VHTLLPPPVPPIPTLKSDFYQTDNHIVINIYVKRQHLSEDHVVIEKIKDS
SLNEIRILVLNYEDDFIESIYSFGDFKVQNKDLKVKISPQGKIEISFLKY
KCERAPSIKMISLERKLRFEDSLLRSWTLLSKEIVTHDVFEFKFKKPSHL
LHFQVSLGHHVPLSLNSIEKMYTPISGGHDNDSLRFLIKIYEDGALTPLL
HSLNLGDEIQIGNPRGSLRTPNVEKRIRLFAGGTGFTPMTRLIEHYLNLN
QDVHLYFFNKTRKDIIYRQKIEEWMKGNLSVIHILSKDSDAEPPFLHGRI
SKNLLGKLLDEEDMDRTSEQIFICGPSSFTQETFRLLTEHFVYSSRNVFK
FGS
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mRNA from alignment at LSalAtl2s260:1326845..1328814-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004967-700814 ID=EMLSAT00000004967-700814|Name=EMLSAT00000004967|organism=Lepeophtheirus salmonis|type=mRNA|length=1970bp|location=Sequence derived from alignment at LSalAtl2s260:1326845..1328814- (Lepeophtheirus salmonis)
ATGGCCGGAAGTAGTAGCAATAGCAAGACCACTCTTTCTCTCCCCACAAA AATTACATCCACTGGCTCCGCCACTGGAAATCCAAGGAACAAAACAGCAC TTCAGCCAGGATGTTCTCTTATGGACTGGGTTTGTTATATTATTATACTT ATACTATCAAAATTATTTTCCCCCCTCCAGGTTGCTCTTATGAACTCTGG CAAGGATTTAACTGGAACAGGAGGACGAATGATCAAAGTCACAAAGGAAG AATTGAAAAAGCATGGACCTGAAGACAAGGAACCTTGGATAGCACTACAA GGCCTTGTGTATAATATTAGTCATTATAAGAGATTTCATCCGGGTGGGGT GGATGAGCTACTACGAGGGGCCGGTAAGGATGCAACAAAGCTATTTAATG AAGTTCATCCTTGGGTTAGTTTTCAGTCAATGTTGTCAAAATGCCTCGTT GGAAAATTGGTGGAAAAAATATTGCCTCCCATCATTCCTCCCAAAAAACC CGGTAATTATAGAGTTCTAATCATAATTATTATGAATATATTTTAAGGAT TGTTTAGGGCTTTATCATTTATTCAGAGAGGCGTTTACCTGCTACAAAGT CAATGTGGAGAGAGGCAAGATTTTTGTCATGTTACTCACTCTTTTGATGT CTTAGCACTGCGTGTTCTTAATATCTATGCAAATATTTTATTGCATCTCT TTATTATATGTACATATAAATTATAAATGATCCTTAAAAGCACTTTAACT CTTCATATTCCTTTTATTTTTTACAGTCCATACTCTTTTGCCTCCGCCCG TACCGCCTATTCCAACTCTTAAGTCGGATTTCTACCAAACGGATAATCAT ATAGTGATAAATATATATGTCAAGAGACAACATCTGAGTGAAGATCACGT AGTGATTGAAAAAATCAAGGATTCTTCCTTAAATGAAATTCGAATCCTAG TATTAAACTATGAGGATGATTTTATCGAAAGCATATACTCCTTTGGAGAC TTTAAAGTTCAAAATAAGGATCTCAAAGTCAAGATTTCACCTCAAGGAAA GATAGAGATTTCTTTTCTGAAATATAAGTGTGAGAGGGCACCTAGTATCA AAATGATTAGTCTAGAACGGAAGCTTCGCTTTGAAGACTCTTTACTCCGA TCATGGACTCTATTGAGCAAGGAAATAGTGACTCATGATGTGTTTGAATT TAAATTTAAGAAACCATCGCACTTGCTTCATTTTCAAGTATCTCTGGGAC ATCATGTTCCACTATCGCTGAATTCTATTGAGAAAATGTATACACCTATT AGTGGAGGTCATGATAATGATAGTTTGAGGTTTCTTATTAAAATATACGA GGATGGAGCTTTAACTCCATTGCTTCATTCCCTTAATTTAGGTAATGAAG TGACAAGAGTTTCCCAAACATAATGAAGTGGACCTTATAATAACTTTTTT ATTCTCCAAATAGGTGATGAAATACAAATAGGAAATCCAAGAGGAAGTCT TCGAACACCGAATGTCGAAAAAAGAATAAGGCTCTTCGCTGGAGGAACGG GATTTACACCGATGACTCGCCTTATTGAGCATTATTTGAACTTAAATCAG GATGTTCATCTCTATTTTTTTAACAAAACGAGGAAAGATATCATTTATCG TCAAAAAATAGAGGAATGGATGAAAGGTAACCTGAGTGTGATACATATCT TAAGCAAAGACTCAGATGCCGAGCCACCATTTCTGCATGGACGTATTTCT AAAAACCTTCTAGGTAAACTTTTAGATGAGGAGGACATGGATAGAACTAG CGAGCAAATCTTTATTTGTGGACCCTCTTCCTTTACTCAAGAAACATTTA GGTAATATTTCACTGAGGGATTTTTTTGTTTAATCTTAATTTCATTTTTC CATTACTTGCAGGTTACTTACAGAACATTTTGTTTATTCCTCACGCAACG TGTTTAAATTTGGTAGTTAA
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