EMLSAT00000004978, EMLSAT00000004978-700825 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004978
Unique NameEMLSAT00000004978-700825
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s260supercontigLSalAtl2s260:1506622..1507848 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004978 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004978EMLSAG00000004978-687744Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000021802EMLSAE00000021802-730730Lepeophtheirus salmonisexon
EMLSAE00000021803EMLSAE00000021803-730731Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780800auto780800Lepeophtheirus salmonispolypeptide
EMLSAP00000004978EMLSAP00000004978Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004978

>EMLSAP00000004978 ID=EMLSAP00000004978|Name=EMLSAP00000004978|organism=Lepeophtheirus salmonis|type=polypeptide|length=386bp
MQEALRKEQRYVLVSKHNIQNARDLLTKWNVFLKSVEFLRGNEYQDRVGV
PITDDFDVSKLNSALKDTCSVVLIGRSQGAKKSRSVKHDIHEKIREVMMM
NNLWTSGLENSLPNHWEKHSDLILLPENSLKGDAFSQSIEDITKIMCDNL
KVKRVARKSRICSNDFRSPKVEFLTAFDNNTWAERIDNGIIYKWDITKSM
FSAGNITEKLRISHFDCSNEVVVDLFAGIGYFSLPYLVKAKAKFLHACEW
NPGAVDALRINMKINKVPCDKYAIHFGDNRKVCPEDVADRVNLGLIPSSE
CSWEAACRALKIKTGGVLHIHGNVDSSKYESTKEALNTWGAETKASIQTI
LGSRWVTKILHIENVKSYGPKIYHAVADLQCKPNYK
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mRNA from alignment at LSalAtl2s260:1506622..1507848-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004978-700825 ID=EMLSAT00000004978-700825|Name=EMLSAT00000004978|organism=Lepeophtheirus salmonis|type=mRNA|length=1227bp|location=Sequence derived from alignment at LSalAtl2s260:1506622..1507848- (Lepeophtheirus salmonis)
ATGCAAGAAGCGCTTCGGAAGGAGCAGCGATATGTCTTGGTCAGCAAGCA
TAATATTCAAAATGCTCGAGACCTACTCACTAAATGGAATGTGTTTCTCA
AAAGTGTCGAATTCCTGAGGGGGAATGAATATCAAGACAGAGTAGGGGTT
CCTATAACGGATGACTTTGATGTATCAAAACTCAATAGTGCTCTTAAGGA
CACTTGTAGCGTTGTTCTCATCGGGAGGAGTCAAGGGGCAAAAAAATCTA
GGTCCGTAAAGCATGACATTCATGAGAAAATCCGAGAAGTATGTATTAAT
AAGTTTGATAAAAGCATACTAGAGTATATTTGTGAGTACACTACACTCTT
GCAGGTCATGATGATGAATAATTTATGGACTTCGGGTCTAGAGAATAGTC
TTCCAAATCACTGGGAAAAACACTCGGATCTTATTTTACTTCCAGAAAAC
TCTCTCAAAGGTGATGCATTTTCTCAATCCATCGAAGACATCACCAAAAT
TATGTGCGACAACTTAAAAGTTAAGAGAGTAGCGCGGAAATCCAGAATTT
GTTCGAATGATTTTAGAAGTCCTAAAGTGGAATTTTTAACAGCTTTTGAT
AATAATACGTGGGCCGAAAGGATCGACAATGGCATTATTTACAAATGGGA
TATTACGAAATCGATGTTTAGTGCGGGGAACATAACTGAAAAATTACGAA
TTAGTCATTTTGATTGTAGTAATGAAGTAGTGGTTGATTTATTCGCAGGA
ATAGGATATTTCTCTTTGCCATATTTAGTGAAGGCCAAAGCCAAGTTTCT
TCACGCTTGCGAATGGAATCCTGGAGCGGTTGATGCATTGCGAATAAATA
TGAAAATAAATAAAGTTCCTTGTGATAAATATGCAATTCATTTTGGGGAT
AATCGAAAGGTGTGCCCGGAAGATGTAGCAGATCGTGTAAATTTGGGACT
TATACCTAGCTCAGAATGCTCGTGGGAAGCTGCGTGTAGAGCTTTAAAAA
TAAAAACTGGAGGGGTATTGCACATCCATGGAAATGTGGATTCATCAAAA
TATGAATCGACGAAAGAGGCCTTAAATACATGGGGTGCTGAGACCAAAGC
AAGTATTCAAACGATTTTGGGGAGTCGTTGGGTTACAAAGATACTCCATA
TCGAAAATGTTAAATCTTATGGGCCAAAAATATATCATGCTGTAGCTGAT
CTTCAATGTAAACCCAATTATAAATAA
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