EMLSAT00000005018, EMLSAT00000005018-700865 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005018
Unique NameEMLSAT00000005018-700865
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s260supercontigLSalAtl2s260:728961..729896 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005018 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005018EMLSAG00000005018-687784Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000021958EMLSAE00000021958-730886Lepeophtheirus salmonisexon
EMLSAE00000021959EMLSAE00000021959-730887Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779502auto779502Lepeophtheirus salmonispolypeptide
EMLSAP00000005018EMLSAP00000005018Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005018

>EMLSAP00000005018 ID=EMLSAP00000005018|Name=EMLSAP00000005018|organism=Lepeophtheirus salmonis|type=polypeptide|length=83bp
MAHYEAKDGLGLEELLLGLLDQPSQANDNFAVDDLTNHLFNGGRSFGSDL
FARNIQRGRDHGLPTYGFWRQHCDLQPKEIIDF
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mRNA from alignment at LSalAtl2s260:728961..729896-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005018-700865 ID=EMLSAT00000005018-700865|Name=EMLSAT00000005018|organism=Lepeophtheirus salmonis|type=mRNA|length=936bp|location=Sequence derived from alignment at LSalAtl2s260:728961..729896- (Lepeophtheirus salmonis)
ATGGCACACTATGAAGCTAAGGATGGATTAGGCCTTGAGGAACTCCTGTT
GGGCCTTCTGGATCAACCTTCACAAGCTAATGATAACTTTGCAGTTGATG
ATCTCACTAATCATCTCTTCAATGGTGGTAGATCATTTGGATCAGATTTA
TTTGCTAGAAACATTCAAAGAGGAAGAGATCATGGACTTCCTACCTATGG
ATTCTGGAGACAGCACTGTGATCTTCAACCTGTTTGTGATTGGAACACAA
AACCAGATAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNACATTCTAACCAAATTGGTTCT
TTCACTGACTCTCAAATCCAAAATATCCGAACCCGTAACTTGGGTCAAAT
CATCTGTGATAACACGGATATTAAAAGAGTAAAAGCAAATGTATTCAAGC
TCAACTCTGACTGGATTACATGCCCCAATGTTTCCACTCTTAATGTCAAA
ACCTTCATTCAAAGCACTTCTTAAATGAGAAACATTTTTTTTTAATATAT
ATAAGCCATACTTTTTAAAATCAAACATATAAATTGCTGCGTTTTTTCTG
ATATCTTTTCATATTCAATGATATTTAAATTCTTTGCAACGTTGTGTATA
ACTATAATAAATTAATAATCAATTCTATGAATCATACATAAAAATACTTT
TTTTTTCTTCTCAAGAAAGAGATAATAGATTTTTAG
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