EMLSAT00000005097, EMLSAT00000005097-700944 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005097
Unique NameEMLSAT00000005097-700944
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s26supercontigLSalAtl2s26:251340..252179 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005097 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005097EMLSAG00000005097-687863Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000022267EMLSAE00000022267-731195Lepeophtheirus salmonisexon
EMLSAE00000022268EMLSAE00000022268-731196Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775309auto775309Lepeophtheirus salmonispolypeptide
EMLSAP00000005097EMLSAP00000005097Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005097

>EMLSAP00000005097 ID=EMLSAP00000005097|Name=EMLSAP00000005097|organism=Lepeophtheirus salmonis|type=polypeptide|length=78bp
MFCSYKYKLEVCVDSRFFRLTSPNHFNVVDHGRSLLEGLGVPRHEYRIKK
LQATKLVIKPLHNLLQGREERFENYKIS
back to top

mRNA from alignment at LSalAtl2s26:251340..252179-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005097-700944 ID=EMLSAT00000005097-700944|Name=EMLSAT00000005097|organism=Lepeophtheirus salmonis|type=mRNA|length=840bp|location=Sequence derived from alignment at LSalAtl2s26:251340..252179- (Lepeophtheirus salmonis)
ATGTTTTGTTCCTACAAGTACAAATTAGAGGTGTAATTTAGTTTATTAAC
ATTTTACATCCTTCAATACTCTGATTTCACCTTATTAACGTAACAATAAG
GAACTCTTTTTATCTTTTAATTTACTATAATTGACCAATCTCCATAAACC
CCTCTTCATCCCTTCATAATTAAATTAAATTTATTCCTTAAAGACATTTT
AAAAGGTACGCACTTATACGTAGGTTGCTACTAATATTTTTAGTCTCAAA
TAAACTATGCGTCGTAGGATCCATCTGTTTTAATCTGTTGATGGCTTGGG
ATTTTTATATAACAATTTTATTGATTAACATTTTGTTATTTACACGTGAT
TTGAGTATTTTAGAGGGATCAGAAATATTCTTTCTATCATACAACCGATG
GATCATACTACGCATATTTTCTTTAAAGCCAGAAATATAAGTAGCAACCT
ACTTATATACCTTTATTTTCACCTTTTTAAACGCAATGTATCAAGTAAAA
CATATTTTTTAAATTGGATTATTTTCTCTCAAAAAAACAATATTAAGAAT
TTCTCTATCTTCCTTCTCTTATTTTCTTCTATATTTCCTTCCAACACCCC
GTCTCGATGCTATTCTAAAGATTCATAGAAATAAGATGTGTTGACTCAAG
ATTCTTTCGCCTGACAAGTCCCAATCATTTTAACGTTGTTGACCACGGAA
GATCTCTCCTTGAGGGCCTTGGAGTTCCTCGGCATGAATACCGGATCAAG
AAACTTCAGGCGACTAAGCTTGTCATCAAGCCCCTTCATAATTTGCTGCA
AGGCCGTGAAGAGCGCTTTGAAAACTATAAGATCTCTTAG
back to top
Add to Basket