EMLSAT00000005116, EMLSAT00000005116-700963 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005116
Unique NameEMLSAT00000005116-700963
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s26supercontigLSalAtl2s26:85872..86493 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005116 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005116EMLSAG00000005116-687882Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000022339EMLSAE00000022339-731267Lepeophtheirus salmonisexon
EMLSAE00000022340EMLSAE00000022340-731268Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771770auto771770Lepeophtheirus salmonispolypeptide
EMLSAP00000005116EMLSAP00000005116Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005116

>EMLSAP00000005116 ID=EMLSAP00000005116|Name=EMLSAP00000005116|organism=Lepeophtheirus salmonis|type=polypeptide|length=181bp
MKVLIALSALLSAALSAPQGYGAPHAVHAATPHHGASSYEQLAHYAYNYG
VVDDYSGNNFGQSESRDGYATTGEYHVQLPDGRLQTVNYHVGDAYSGYVA
DVTYSGTPHYGAAGHAVAHGVGHHGIGHAVAGHGPHGHGVAAHAVGYGTH
GVTHGIGGHAVHGSGHHSASHGHALHGLGHF
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mRNA from alignment at LSalAtl2s26:85872..86493-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005116-700963 ID=EMLSAT00000005116-700963|Name=EMLSAT00000005116|organism=Lepeophtheirus salmonis|type=mRNA|length=622bp|location=Sequence derived from alignment at LSalAtl2s26:85872..86493- (Lepeophtheirus salmonis)
ATGAAGGTAAAATAACAAATGCAGTTTGGGTTTTAACATTGATAACAAAT
TATATATTCCTCGACGTCTTGATCCATATCAGGTCCTCATTGCTCTCTCA
GCCCTTTTATCTGCTGCTTTGTCTGCTCCTCAAGGATATGGCGCCCCTCA
TGCCGTACATGCTGCTACTCCTCATCATGGAGCCTCCTCATATGAGCAAC
TTGCTCACTATGCCTACAACTATGGTGTTGTGGATGACTACTCTGGAAAC
AACTTTGGACAATCTGAGTCCCGTGATGGTTATGCCACCACTGGTGAATA
CCATGTTCAATTACCCGATGGTCGTCTTCAAACCGTCAACTATCACGTAG
GAGATGCCTACTCCGGTTATGTCGCTGATGTAACTTATAGTGGAACACCT
CACTATGGAGCTGCAGGACACGCTGTTGCTCACGGTGTTGGACATCATGG
AATTGGTCATGCAGTTGCAGGCCATGGTCCTCATGGACACGGTGTTGCTG
CACATGCTGTTGGTTATGGTACTCACGGAGTAACCCATGGAATCGGAGGG
CATGCTGTTCATGGAAGCGGACACCACTCTGCATCTCATGGACACGCTCT
TCACGGTCTTGGTCACTTTTAG
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