EMLSAT00000005275, EMLSAT00000005275-701122 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005275
Unique NameEMLSAT00000005275-701122
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2821supercontigLSalAtl2s2821:2971..4872 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005275 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005275EMLSAG00000005275-688041Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000023055EMLSAE00000023055-731983Lepeophtheirus salmonisexon
EMLSAE00000023056EMLSAE00000023056-731984Lepeophtheirus salmonisexon
EMLSAE00000023057EMLSAE00000023057-731985Lepeophtheirus salmonisexon
EMLSAE00000023058EMLSAE00000023058-731986Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768363auto768363Lepeophtheirus salmonispolypeptide
EMLSAP00000005275EMLSAP00000005275Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005275

>EMLSAP00000005275 ID=EMLSAP00000005275|Name=EMLSAP00000005275|organism=Lepeophtheirus salmonis|type=polypeptide|length=341bp
MAAGPVSERNQDATIYVGGLDEKVTDSLLWELFVQAGPVVNVHTPKDRVT
MVHQGYGFVEFLTEEDADYSIKIMNMIKLYGKPIRVNKASAHQKNLDVGA
NVFIGNLDPEVDEKLLYDTFSAFGVILTTPKIQRDPETGNSKGFAFINYA
SFEASDXAIEAMNGQYLCNRAISLSYAFKKDAKGERHGSAAERLLAAQNP
LSQADRPHQLFADAPPVPMPTPIPVLPPPPPPPPSSVMNMPPPPPGSHPM
LPPRPPSQFPPMNGMHRPPPPPSPMGGNWMPPPSMQGFPPPPPPPGKNGP
GYPPSWNGPPLPPAPPGHPRPPLPPSGRPPMPPAPPPPPPS
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mRNA from alignment at LSalAtl2s2821:2971..4872+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005275-701122 ID=EMLSAT00000005275-701122|Name=EMLSAT00000005275|organism=Lepeophtheirus salmonis|type=mRNA|length=1902bp|location=Sequence derived from alignment at LSalAtl2s2821:2971..4872+ (Lepeophtheirus salmonis)
AGGGTATTGATATTTTTTGATCAAGGTTACGTAAATCCTGAACAATATTT ATATACATAATTTTGGTTTACTTTTTATTTCAACCATTTTCTTTCCTTTT TAGTATCTTTATATGTAGCTAAAGCATATATGTAGCTATCTAGCCAGAAT TAATAGTTTAATTAAGCAACAGCTGAAATATCATCATCCCAGGTACACAA CAAACCTCATCCATTGAATTGTACATAGATTTACCGCATTTACGTATTAT TATTTATTACACCGCATCTTCTCCAGACGTCTATGACTATCTTACTCTCC TGAGTGATTTAGACAATATTTGACATTTGTAGGAGACAAGATGGCTGCAG GTCCCGTGTCGGAGCGTAATCAAGGTATGAGTTACAAGAGGGATCCGTAC TCGTAATGTTTGTTCCTACATTTGACATTATTTTTTAGATGCGACGATTT ATGTTGGGGGTTTGGACGAAAAAGTAACGGATTCTCTCCTATGGGAACTT TTTGTTCAAGCTGGACCTGTCGTGAACGTGCATACCCCAAAGGACCGTGT GACGATGGTGCATCAGGGCTACGGCTTCGTGGAGTTTCTCACGGAAGAAG ACGCGGATTACTCAATCAAAATCATGAACATGATCAAACTGTACGGAAAG CCCATTCGAGTGAACAAAGCTTCCGCTCATCAAAAGAATTTGGATGTGGG CGCGAATGTCTTTATCGGAAATTTGGATCCGGAAGTGGATGAGAAACTTC TTTATGACACATTTTCCGCATTCGGTGTCATTCTGACAACGCCAAAGGTA GAGCACGACATCCATTTTCCATTCTTAGTTCCTTTATTTCAGAGGTTTCT TATATTATTTACTTCATTTTTGTATTAGCCATGACAATCATTGACATGTA GCAACCTTTGAGTTCAATCATTCAAAGTAATTAAAACTACCTAATAAGAA TTGGTTACTTAATATGTTGCTCCATTGATCATTAGTAGCAATTGTCATTT TGATATTTGTTGGTTGTAGATTATTTAGTGGAACAACAAAACTAAGTTCA TGTACTCAAGGTTTTTTTCTATTTTTATTTTTGGTAGATTCAACGTGATC CAGAAACGGGTAATTCCAAGGGCTTTGCATTTATCAACTACGCAAGTTTT GAGGCATCTGATSCCGCCATTGAGGCGATGAATGGGCAATACCTTTGCAA TCGTGCCATTTCCTTATCCTATGCATTCAAGAAAGACGCCAAAGGAGAGC GACATGGATCTGCTGCAGAGCGTCTCCTTGCTGCTCAAAATCCATTGTCT CAAGCAGACAGACCCCATCAACTCTTCGCAGATGCTCCCCCTGTCCCCAT GCCCACGCCCATTCCAGTATTGCCACCTCCTCCTCCTCCACCCCCTTCGT CAGTCATGAATATGCCTCCGCCACCTCCTGGCTCTCATCCAATGCTTCCT CCAAGGCCTCCGAGTCAATTTCCACCCATGAATGGAATGCATCGGCCTCC TCCACCACCTTCTCCAATGGGCGGAAATTGGATGCCACCTCCATCCATGC AAGGTTTCCCACCACCCCCACCTCCTCCTGGGAAAAATGGTCCTGGTTAT CCTCCTTCATGGAATGGMCCGCCATTACCTCCAGCGCCTCCTGGACATCC ACGGCCTCCTTTACCTCCTTCTGGAAGGCCGCCAATGCCTCCTGCACCTC CACCCCCTCCGCCTTCATAATTGTATTATTCATTTTTTACGAATACTATG TAAATAGAAAAGGTTGAGTAAATAAAAATGACCTAGTATTTCATCATATC ATAAATAATTAAATTGAAGAGTATCAAACATTCTTATTTGAATGACACGT ACCTCGATATACGAGTTTGTCACTTTTCTGGATCGGAGCTTGTAAGTTGG AG
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